RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 SPZ1Q9BXG8 430 aa13.55□□□□□ -0.24
GTF3C1-209ENST00000568569 IL25Q9H293 177 aa13.55□□□□□ -0.24
GTF3C1-209ENST00000568569 TLR9Q9NR96 1032 aa13.55□□□□□ -0.24
GTF3C1-209ENST00000568569 AAASQ9NRG9 546 aa13.55□□□□□ -0.24
GTF3C1-209ENST00000568569 FAM86C1Q9NVL1 165 aa13.55□□□□□ -0.24
GTF3C1-209ENST00000568569 SEC63Q9UGP8 760 aaKnown RBP13.55□□□□□ -0.24
GTF3C1-209ENST00000568569 LRFN2Q9ULH4 789 aa13.55□□□□□ -0.24
GTF3C1-209ENST00000568569 TRPC6Q9Y210 931 aa13.55□□□□□ -0.24
GTF3C1-209ENST00000568569 PCDHB12Q9Y5F1 795 aa13.55□□□□□ -0.24
GTF3C1-209ENST00000568569 PER2O15055 1255 aa13.54□□□□□ -0.24
GTF3C1-209ENST00000568569 MAFGO15525 162 aa13.54□□□□□ -0.24
GTF3C1-209ENST00000568569 PPFIA3O75145 1194 aa13.54□□□□□ -0.24
GTF3C1-209ENST00000568569 SRGAP2BP0DMP2 458 aa13.54□□□□□ -0.24
GTF3C1-209ENST00000568569 AVPR2P30518 371 aa13.54□□□□□ -0.24
GTF3C1-209ENST00000568569 SARSP49591 514 aaKnown RBP13.54□□□□□ -0.24
GTF3C1-209ENST00000568569 GATMP50440 423 aa13.54□□□□□ -0.24
GTF3C1-209ENST00000568569 NUCB1Q02818 461 aa13.54□□□□□ -0.24
GTF3C1-209ENST00000568569 TMEM62Q0P6H9 643 aa13.54□□□□□ -0.24
GTF3C1-209ENST00000568569 PTPN21Q16825 1174 aa13.54□□□□□ -0.24
GTF3C1-209ENST00000568569 DUSP6Q16828 381 aa13.54□□□□□ -0.24
GTF3C1-209ENST00000568569 SPOUT1Q5T280 376 aaKnown RBP13.54□□□□□ -0.24
GTF3C1-209ENST00000568569 PDE12Q6L8Q7 609 aaKnown RBP13.54□□□□□ -0.24
GTF3C1-209ENST00000568569 FAM43BQ6ZT52 329 aaPredicted RBP13.54□□□□□ -0.24
GTF3C1-209ENST00000568569 CELF4Q9BZC1 486 aaKnown RBP13.54□□□□□ -0.24
GTF3C1-209ENST00000568569 AZI2Q9H6S1 392 aa13.54□□□□□ -0.24
GTF3C1-209ENST00000568569 JPH1Q9HDC5 661 aaPredicted RBP13.54□□□□□ -0.24
GTF3C1-209ENST00000568569 PKD2L1Q9P0L9 805 aa13.54□□□□□ -0.24
GTF3C1-209ENST00000568569 PCDHB7Q9Y5E2 793 aa13.54□□□□□ -0.24
GTF3C1-209ENST00000568569 CYP21A2P08686 494 aa13.53□□□□□ -0.24
GTF3C1-209ENST00000568569 KIF5BP33176 963 aa13.53□□□□□ -0.24
GTF3C1-209ENST00000568569 RBM10P98175 930 aaKnown RBP13.53□□□□□ -0.24
GTF3C1-209ENST00000568569 VN1R2Q8NFZ6 395 aa13.53□□□□□ -0.24
GTF3C1-209ENST00000568569 NCOA7Q8NI08 942 aa13.53□□□□□ -0.24
GTF3C1-209ENST00000568569 CTCFLQ8NI51 663 aaPredicted RBP13.53□□□□□ -0.24
GTF3C1-209ENST00000568569 ATOH1Q92858 354 aaPredicted RBP13.53□□□□□ -0.24
GTF3C1-209ENST00000568569 PCYT2Q99447 389 aa13.53□□□□□ -0.24
GTF3C1-209ENST00000568569 MAP3K14Q99558 947 aa13.53□□□□□ -0.24
GTF3C1-209ENST00000568569 TMX1Q9H3N1 280 aa13.53□□□□□ -0.24
GTF3C1-209ENST00000568569 RWDD1Q9H446 243 aaPredicted RBP13.53□□□□□ -0.24
GTF3C1-209ENST00000568569 PSTPIP2Q9H939 334 aa13.53□□□□□ -0.24
GTF3C1-209ENST00000568569 RNF216Q9NWF9 866 aaPredicted RBP13.53□□□□□ -0.24
GTF3C1-209ENST00000568569 PCDHA2Q9Y5H9 948 aa13.53□□□□□ -0.24
GTF3C1-209ENST00000568569 UBIAD1Q9Y5Z9 338 aa13.53□□□□□ -0.24
GTF3C1-209ENST00000568569 KDM3AQ9Y4C1 1321 aa13.53□□□□□ -0.24
GTF3C1-209ENST00000568569 VPS13AQ96RL7 3174 aa13.53□□□□□ -0.24
GTF3C1-209ENST00000568569 KAT6AQ92794 2004 aa13.52□□□□□ -0.24
GTF3C1-209ENST00000568569 SMIM35A0A1B0GVV1 85 aa13.52□□□□□ -0.25
GTF3C1-209ENST00000568569 SPDYE3A6NKU9 549 aa13.52□□□□□ -0.25
GTF3C1-209ENST00000568569 FGF18O76093 207 aa13.52□□□□□ -0.25
GTF3C1-209ENST00000568569 DDAH1O94760 285 aa13.52□□□□□ -0.25
GTF3C1-209ENST00000568569 IBSPP21815 317 aaPredicted RBP13.52□□□□□ -0.25
GTF3C1-209ENST00000568569 SMARCA1P28370 1054 aa13.52□□□□□ -0.25
GTF3C1-209ENST00000568569 NUBP1P53384 320 aa13.52□□□□□ -0.25
GTF3C1-209ENST00000568569 KRT76Q01546 638 aa13.52□□□□□ -0.25
GTF3C1-209ENST00000568569 NFX1Q12986 1120 aaKnown RBP13.52□□□□□ -0.25
GTF3C1-209ENST00000568569 AAMPQ13685 434 aa13.52□□□□□ -0.25
GTF3C1-209ENST00000568569 TMEM266Q2M3C6 531 aa13.52□□□□□ -0.25
GTF3C1-209ENST00000568569 TMEM184AQ6ZMB5 413 aa13.52□□□□□ -0.25
GTF3C1-209ENST00000568569 ZBTB33Q86T24 672 aa13.52□□□□□ -0.25
GTF3C1-209ENST00000568569 NME8Q8N427 588 aa13.52□□□□□ -0.25
GTF3C1-209ENST00000568569 LZTS2Q9BRK4 669 aa13.52□□□□□ -0.25
GTF3C1-209ENST00000568569 JADE2Q9NQC1 790 aa13.52□□□□□ -0.25
GTF3C1-209ENST00000568569 SLC9A2Q9UBY0 812 aa13.52□□□□□ -0.25
GTF3C1-209ENST00000568569 DOCK5Q9H7D0 1870 aa13.51□□□□□ -0.25
GTF3C1-209ENST00000568569 DENND3A2RUS2 1198 aa13.51□□□□□ -0.25
GTF3C1-209ENST00000568569 TBKBP1A7MCY6 615 aa13.51□□□□□ -0.25
GTF3C1-209ENST00000568569 E7EWF7 191 aa13.51□□□□□ -0.25
GTF3C1-209ENST00000568569 GNAQP50148 359 aa13.51□□□□□ -0.25
GTF3C1-209ENST00000568569 ERVFC1P60507 584 aa13.51□□□□□ -0.25
GTF3C1-209ENST00000568569 FOXK2Q01167 660 aa13.51□□□□□ -0.25
GTF3C1-209ENST00000568569 THNSL1Q8IYQ7 743 aa13.51□□□□□ -0.25
GTF3C1-209ENST00000568569 ZNF654Q8IZM8 581 aa13.51□□□□□ -0.25
GTF3C1-209ENST00000568569 RASGRP4Q8TDF6 673 aa13.51□□□□□ -0.25
GTF3C1-209ENST00000568569 IGDCC4Q8TDY8 1250 aa13.51□□□□□ -0.25
GTF3C1-209ENST00000568569 TRAPPC12Q8WVT3 735 aa13.51□□□□□ -0.25
GTF3C1-209ENST00000568569 C1orf112Q9NSG2 853 aa13.51□□□□□ -0.25
GTF3C1-209ENST00000568569 RIF1Q5UIP0 2472 aaKnown RBP13.51□□□□□ -0.25
GTF3C1-209ENST00000568569 H0Y858 1186 aa13.5□□□□□ -0.25
GTF3C1-209ENST00000568569 FSCN2O14926 492 aa13.5□□□□□ -0.25
GTF3C1-209ENST00000568569 RPS6KA5O75582 802 aa13.5□□□□□ -0.25
GTF3C1-209ENST00000568569 HOXB8P17481 243 aaPredicted RBP13.5□□□□□ -0.25
GTF3C1-209ENST00000568569 TECP42680 631 aa13.5□□□□□ -0.25
GTF3C1-209ENST00000568569 ACTR2P61160 394 aa13.5□□□□□ -0.25
GTF3C1-209ENST00000568569 KCNC3Q14003 757 aa13.5□□□□□ -0.25
GTF3C1-209ENST00000568569 PLCB4Q15147 1175 aa13.5□□□□□ -0.25
GTF3C1-209ENST00000568569 UBE2SQ16763 222 aa13.5□□□□□ -0.25
GTF3C1-209ENST00000568569 ODR4Q5SWX8 454 aa13.5□□□□□ -0.25
GTF3C1-209ENST00000568569 ANKRD54Q6NXT1 300 aa13.5□□□□□ -0.25
GTF3C1-209ENST00000568569 SLC24A5Q71RS6 500 aa13.5□□□□□ -0.25
GTF3C1-209ENST00000568569 PLPPR4Q7Z2D5 763 aa13.5□□□□□ -0.25
GTF3C1-209ENST00000568569 COLGALT1Q8NBJ5 622 aa13.5□□□□□ -0.25
GTF3C1-209ENST00000568569 RIPOR3Q96MK2 946 aa13.5□□□□□ -0.25
GTF3C1-209ENST00000568569 ADAM2Q99965 735 aa13.5□□□□□ -0.25
GTF3C1-209ENST00000568569 SDF4Q9BRK5 362 aa13.5□□□□□ -0.25
GTF3C1-209ENST00000568569 MYL10Q9BUA6 226 aa13.5□□□□□ -0.25
GTF3C1-209ENST00000568569 S1PR5Q9H228 398 aa13.5□□□□□ -0.25
GTF3C1-209ENST00000568569 ERVK-5Q9HDB9 667 aa13.5□□□□□ -0.25
GTF3C1-209ENST00000568569 KCNH7Q9NS40 1196 aa13.5□□□□□ -0.25
GTF3C1-209ENST00000568569 TMEM260Q9NX78 707 aa13.5□□□□□ -0.25
GTF3C1-209ENST00000568569 GINS2Q9Y248 185 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms