RNA–Protein interactions for RNA: ENST00000568378.5

KARS-209, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5 BASIC

Gene KARS, Length 459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-209ENST00000568378 TMC7Q7Z402 723 aa11.14□□□□□ -0.63
KARS-209ENST00000568378 RTN4RL1Q86UN2 441 aaPredicted RBP11.14□□□□□ -0.63
KARS-209ENST00000568378 CRIPAKQ8N1N5 446 aa11.14□□□□□ -0.63
KARS-209ENST00000568378 DNAJB3Q8WWF6 145 aa11.14□□□□□ -0.63
KARS-209ENST00000568378 MRPS27Q92552 414 aaKnown RBP11.14□□□□□ -0.63
KARS-209ENST00000568378 PDCD2LQ9BRP1 358 aa11.14□□□□□ -0.63
KARS-209ENST00000568378 UBA5Q9GZZ9 404 aa11.14□□□□□ -0.63
KARS-209ENST00000568378 CPVLQ9H3G5 476 aa11.14□□□□□ -0.63
KARS-209ENST00000568378 LZTS1Q9Y250 596 aa11.14□□□□□ -0.63
KARS-209ENST00000568378 PCDHB7Q9Y5E2 793 aa11.14□□□□□ -0.63
KARS-209ENST00000568378 HCFC2Q9Y5Z7 792 aa11.14□□□□□ -0.63
KARS-209ENST00000568378 FAM208BQ5VWN6 2430 aa11.14□□□□□ -0.63
KARS-209ENST00000568378 M0QZ92 97 aa11.13□□□□□ -0.63
KARS-209ENST00000568378 RLBP1P12271 317 aa11.13□□□□□ -0.63
KARS-209ENST00000568378 LAG3P18627 525 aa11.13□□□□□ -0.63
KARS-209ENST00000568378 MRPS6P82932 125 aaKnown RBP11.13□□□□□ -0.63
KARS-209ENST00000568378 PAK2Q13177 524 aa11.13□□□□□ -0.63
KARS-209ENST00000568378 GPATCH4Q5T3I0 446 aaKnown RBP11.13□□□□□ -0.63
KARS-209ENST00000568378 KIAA1841Q6NSI8 718 aa11.13□□□□□ -0.63
KARS-209ENST00000568378 XRRA1Q6P2D8 792 aa11.13□□□□□ -0.63
KARS-209ENST00000568378 SUMF1Q8NBK3 374 aa11.13□□□□□ -0.63
KARS-209ENST00000568378 GPKOWQ92917 476 aaPredicted RBP eCLIP11.13□□□□□ -0.63
KARS-209ENST00000568378 TUBE1Q9UJT0 475 aa11.13□□□□□ -0.63
KARS-209ENST00000568378 USP18Q9UMW8 372 aa11.13□□□□□ -0.63
KARS-209ENST00000568378 DHX16O60231 1041 aaKnown RBP11.12□□□□□ -0.63
KARS-209ENST00000568378 DCNP07585 359 aaKnown RBP11.12□□□□□ -0.63
KARS-209ENST00000568378 CFHP08603 1231 aa11.12□□□□□ -0.63
KARS-209ENST00000568378 CCND2P30279 289 aa11.12□□□□□ -0.63
KARS-209ENST00000568378 SARSP49591 514 aaKnown RBP11.12□□□□□ -0.63
KARS-209ENST00000568378 SP4Q02446 784 aa11.12□□□□□ -0.63
KARS-209ENST00000568378 KRT17Q04695 432 aa11.12□□□□□ -0.63
KARS-209ENST00000568378 PPFIA1Q13136 1202 aa11.12□□□□□ -0.63
KARS-209ENST00000568378 COL9A3Q14050 684 aaPredicted RBP11.12□□□□□ -0.63
KARS-209ENST00000568378 SMC1AQ14683 1233 aaKnown RBP11.12□□□□□ -0.63
KARS-209ENST00000568378 PGM5Q15124 567 aa11.12□□□□□ -0.63
KARS-209ENST00000568378 IER5Q5VY09 327 aa11.12□□□□□ -0.63
KARS-209ENST00000568378 METTL7BQ6UX53 244 aa11.12□□□□□ -0.63
KARS-209ENST00000568378 CYFIP1Q7L576 1253 aa11.12□□□□□ -0.63
KARS-209ENST00000568378 OTOP3Q7RTS5 596 aa11.12□□□□□ -0.63
KARS-209ENST00000568378 VSIG10LQ86VR7 867 aa11.12□□□□□ -0.63
KARS-209ENST00000568378 C1orf210Q8IVY1 113 aa11.12□□□□□ -0.63
KARS-209ENST00000568378 C12orf76Q8N812 135 aaPredicted RBP11.12□□□□□ -0.63
KARS-209ENST00000568378 TMEM87AQ8NBN3 555 aa11.12□□□□□ -0.63
KARS-209ENST00000568378 ZFP91Q96JP5 570 aaPredicted RBP11.12□□□□□ -0.63
KARS-209ENST00000568378 SEC62Q99442 399 aaKnown RBP11.12□□□□□ -0.63
KARS-209ENST00000568378 GPR20Q99678 358 aa11.12□□□□□ -0.63
KARS-209ENST00000568378 BCAS3Q9H6U6 928 aa11.12□□□□□ -0.63
KARS-209ENST00000568378 TBC1D17Q9HA65 648 aa11.12□□□□□ -0.63
KARS-209ENST00000568378 ECHDC1Q9NTX5 307 aa11.12□□□□□ -0.63
KARS-209ENST00000568378 TYW1Q9NV66 732 aaKnown RBP11.12□□□□□ -0.63
KARS-209ENST00000568378 DZANK1Q9NVP4 752 aa11.12□□□□□ -0.63
KARS-209ENST00000568378 HCSTQ9UBK5 93 aa11.12□□□□□ -0.63
KARS-209ENST00000568378 PADI3Q9ULW8 664 aa11.12□□□□□ -0.63
KARS-209ENST00000568378 KAT6AQ92794 2004 aa11.11□□□□□ -0.63
KARS-209ENST00000568378 ORC4O43929 436 aa11.11□□□□□ -0.63
KARS-209ENST00000568378 RPLP2P05387 115 aaKnown RBP11.11□□□□□ -0.63
KARS-209ENST00000568378 SNHG28P0DPA3 235 aa11.11□□□□□ -0.63
KARS-209ENST00000568378 PLCB3Q01970 1234 aa11.11□□□□□ -0.63
KARS-209ENST00000568378 NEDD9Q14511 834 aa11.11□□□□□ -0.63
KARS-209ENST00000568378 GNPTABQ3T906 1256 aa11.11□□□□□ -0.63
KARS-209ENST00000568378 PPM1JQ5JR12 505 aa11.11□□□□□ -0.63
KARS-209ENST00000568378 CCDC149Q6ZUS6 474 aa11.11□□□□□ -0.63
KARS-209ENST00000568378 IL31RAQ8NI17 732 aa11.11□□□□□ -0.63
KARS-209ENST00000568378 FAM49AQ9H0Q0 323 aaPredicted RBP11.11□□□□□ -0.63
KARS-209ENST00000568378 KCNK12Q9HB15 430 aa11.11□□□□□ -0.63
KARS-209ENST00000568378 TCP11L1Q9NUJ3 509 aa11.11□□□□□ -0.63
KARS-209ENST00000568378 WNT16Q9UBV4 365 aa11.11□□□□□ -0.63
KARS-209ENST00000568378 CA14Q9ULX7 337 aa11.11□□□□□ -0.63
KARS-209ENST00000568378 TRPV2Q9Y5S1 764 aa11.11□□□□□ -0.63
KARS-209ENST00000568378 SQORQ9Y6N5 450 aa11.11□□□□□ -0.63
KARS-209ENST00000568378 FANCMQ8IYD8 2048 aa11.1□□□□□ -0.63
KARS-209ENST00000568378 KRBA1A5PL33 1030 aa11.1□□□□□ -0.63
KARS-209ENST00000568378 SPDYE4A6NLX3 237 aa11.1□□□□□ -0.63
KARS-209ENST00000568378 SPTLC1O15269 473 aa11.1□□□□□ -0.63
KARS-209ENST00000568378 NARSO43776 548 aaKnown RBP11.1□□□□□ -0.63
KARS-209ENST00000568378 CLASP2O75122 1294 aaKnown RBP11.1□□□□□ -0.63
KARS-209ENST00000568378 HOXB3P14651 431 aaPredicted RBP11.1□□□□□ -0.63
KARS-209ENST00000568378 PPM1AP35813 382 aa11.1□□□□□ -0.63
KARS-209ENST00000568378 HSD17B4P51659 736 aa11.1□□□□□ -0.63
KARS-209ENST00000568378 IGBP1P78318 339 aa11.1□□□□□ -0.63
KARS-209ENST00000568378 TMEM62Q0P6H9 643 aa11.1□□□□□ -0.63
KARS-209ENST00000568378 BMS1Q14692 1282 aaKnown RBP11.1□□□□□ -0.63
KARS-209ENST00000568378 GRIK4Q16099 956 aa11.1□□□□□ -0.63
KARS-209ENST00000568378 QRICH1Q2TAL8 776 aa11.1□□□□□ -0.63
KARS-209ENST00000568378 FAM102BQ5T8I3 360 aa11.1□□□□□ -0.63
KARS-209ENST00000568378 KANK3Q6NY19 840 aa11.1□□□□□ -0.63
KARS-209ENST00000568378 ADGRF4Q8IZF3 695 aa11.1□□□□□ -0.63
KARS-209ENST00000568378 GPATCH3Q96I76 525 aa11.1□□□□□ -0.63
KARS-209ENST00000568378 SIT1Q9Y3P8 196 aa11.1□□□□□ -0.63
KARS-209ENST00000568378 GPR179Q6PRD1 2367 aa11.1□□□□□ -0.63
KARS-209ENST00000568378 FNDC1Q4ZHG4 1894 aaPredicted RBP11.09□□□□□ -0.63
KARS-209ENST00000568378 DENND3A2RUS2 1198 aa11.09□□□□□ -0.63
KARS-209ENST00000568378 C2orf71A6NGG8 1288 aa11.09□□□□□ -0.63
KARS-209ENST00000568378 MARK3P27448 753 aa11.09□□□□□ -0.63
KARS-209ENST00000568378 PDE4AP27815 886 aa11.09□□□□□ -0.63
KARS-209ENST00000568378 HOXA13P31271 388 aaPredicted RBP11.09□□□□□ -0.63
KARS-209ENST00000568378 NFX1Q12986 1120 aaKnown RBP11.09□□□□□ -0.63
KARS-209ENST00000568378 NONOQ15233 471 aaKnown RBP eCLIP11.09□□□□□ -0.63
KARS-209ENST00000568378 STOX1Q6ZVD7 989 aa11.09□□□□□ -0.63
KARS-209ENST00000568378 MRPL43Q8N983 215 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms