RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 EIF2AK2P19525 551 aaKnown RBP19.98■□□□□ 0.79
SMPD3-211ENST00000568373 ZNF131P52739 623 aa19.98■□□□□ 0.79
SMPD3-211ENST00000568373 ITGB3BPQ13352 177 aaPredicted RBP19.98■□□□□ 0.79
SMPD3-211ENST00000568373 MTMR1Q13613 665 aa19.98■□□□□ 0.79
SMPD3-211ENST00000568373 RNF207Q6ZRF8 634 aa19.98■□□□□ 0.79
SMPD3-211ENST00000568373 MIER3Q7Z3K6 550 aa19.98■□□□□ 0.79
SMPD3-211ENST00000568373 FRMD5Q7Z6J6 570 aa19.98■□□□□ 0.79
SMPD3-211ENST00000568373 MYCT1Q8N699 235 aa19.98■□□□□ 0.79
SMPD3-211ENST00000568373 WNK4Q96J92 1243 aa19.98■□□□□ 0.79
SMPD3-211ENST00000568373 SEL1LQ9UBV2 794 aa19.98■□□□□ 0.79
SMPD3-211ENST00000568373 ODF2LQ9ULJ1 636 aa19.98■□□□□ 0.79
SMPD3-211ENST00000568373 FZD1Q9UP38 647 aa19.98■□□□□ 0.79
SMPD3-211ENST00000568373 ZHX2Q9Y6X8 837 aa19.98■□□□□ 0.79
SMPD3-211ENST00000568373 ASTN1O14525 1302 aa19.98■□□□□ 0.79
SMPD3-211ENST00000568373 CTAGE9A4FU28 777 aa19.98■□□□□ 0.79
SMPD3-211ENST00000568373 EFCAB8A8MWE9 144 aa19.98■□□□□ 0.79
SMPD3-211ENST00000568373 PPP2R3AQ06190 1150 aa19.98■□□□□ 0.79
SMPD3-211ENST00000568373 PGM5Q15124 567 aa19.98■□□□□ 0.79
SMPD3-211ENST00000568373 RRAGAQ7L523 313 aa19.98■□□□□ 0.79
SMPD3-211ENST00000568373 GPC2Q8N158 579 aa19.98■□□□□ 0.79
SMPD3-211ENST00000568373 CCDC42Q96M95 316 aa19.98■□□□□ 0.79
SMPD3-211ENST00000568373 PPP2R3BQ9Y5P8 575 aa19.98■□□□□ 0.79
SMPD3-211ENST00000568373 PHIPQ8WWQ0 1821 aa19.97■□□□□ 0.79
SMPD3-211ENST00000568373 LRRC53A6NM62 1247 aa19.97■□□□□ 0.79
SMPD3-211ENST00000568373 HMGCS2P54868 508 aa19.97■□□□□ 0.79
SMPD3-211ENST00000568373 CACNA2D4Q7Z3S7 1137 aa19.97■□□□□ 0.79
SMPD3-211ENST00000568373 UBXN4Q92575 508 aa19.97■□□□□ 0.79
SMPD3-211ENST00000568373 KLRG1Q96E93 195 aa19.97■□□□□ 0.79
SMPD3-211ENST00000568373 RMDN3Q96TC7 470 aa19.97■□□□□ 0.79
SMPD3-211ENST00000568373 CEP72Q9P209 647 aa19.97■□□□□ 0.79
SMPD3-211ENST00000568373 ARHGAP20Q9P2F6 1191 aa19.97■□□□□ 0.79
SMPD3-211ENST00000568373 TRIM10Q9UDY6 481 aa19.97■□□□□ 0.79
SMPD3-211ENST00000568373 ARMCX3Q9UH62 379 aaPredicted RBP19.97■□□□□ 0.79
SMPD3-211ENST00000568373 DICER1Q9UPY3 1922 aaKnown RBP19.97■□□□□ 0.79
SMPD3-211ENST00000568373 ARHGEF35A5YM69 484 aa19.96■□□□□ 0.79
SMPD3-211ENST00000568373 C19orf81C9J6K1 198 aa19.96■□□□□ 0.79
SMPD3-211ENST00000568373 NR3C1P04150 777 aa19.96■□□□□ 0.79
SMPD3-211ENST00000568373 P4HBP07237 508 aaKnown RBP19.96■□□□□ 0.79
SMPD3-211ENST00000568373 GUCY2CP25092 1073 aa19.96■□□□□ 0.79
SMPD3-211ENST00000568373 RPL13P26373 211 aaKnown RBP19.96■□□□□ 0.79
SMPD3-211ENST00000568373 KCNA1Q09470 495 aa19.96■□□□□ 0.79
SMPD3-211ENST00000568373 PDXDC1Q6P996 788 aa19.96■□□□□ 0.79
SMPD3-211ENST00000568373 KIAA1328Q86T90 577 aa19.96■□□□□ 0.79
SMPD3-211ENST00000568373 REPS2Q8NFH8 660 aa19.96■□□□□ 0.79
SMPD3-211ENST00000568373 NAPGQ99747 312 aaPredicted RBP19.96■□□□□ 0.79
SMPD3-211ENST00000568373 PDCD2LQ9BRP1 358 aa19.96■□□□□ 0.79
SMPD3-211ENST00000568373 ZSWIM4Q9H7M6 989 aa19.96■□□□□ 0.79
SMPD3-211ENST00000568373 PXMP2Q9NR77 195 aa19.96■□□□□ 0.79
SMPD3-211ENST00000568373 RNF146Q9NTX7 359 aa19.96■□□□□ 0.79
SMPD3-211ENST00000568373 GUCA1BQ9UMX6 200 aa19.96■□□□□ 0.79
SMPD3-211ENST00000568373 COL11A1P12107 1806 aaPredicted RBP19.96■□□□□ 0.79
SMPD3-211ENST00000568373 NOL4O94818 638 aa19.96■□□□□ 0.79
SMPD3-211ENST00000568373 PLEKP08567 350 aaPredicted RBP19.96■□□□□ 0.79
SMPD3-211ENST00000568373 NMT1P30419 496 aaKnown RBP19.96■□□□□ 0.79
SMPD3-211ENST00000568373 KCNH2Q12809 1159 aa19.96■□□□□ 0.79
SMPD3-211ENST00000568373 TUBB2AQ13885 445 aa19.96■□□□□ 0.79
SMPD3-211ENST00000568373 CCDC122Q5T0U0 273 aa19.96■□□□□ 0.79
SMPD3-211ENST00000568373 NSMFQ6X4W1 530 aa19.96■□□□□ 0.79
SMPD3-211ENST00000568373 FIZ1Q96SL8 496 aa19.96■□□□□ 0.79
SMPD3-211ENST00000568373 TUBB2BQ9BVA1 445 aa19.96■□□□□ 0.79
SMPD3-211ENST00000568373 TBC1D22BQ9NU19 505 aa19.96■□□□□ 0.79
SMPD3-211ENST00000568373 RIPK3Q9Y572 518 aa19.96■□□□□ 0.79
SMPD3-211ENST00000568373 SSC5DA1L4H1 1573 aa19.96■□□□□ 0.79
SMPD3-211ENST00000568373 ZMYM2Q9UBW7 1377 aa19.95■□□□□ 0.78
SMPD3-211ENST00000568373 MYH11P35749 1972 aa19.95■□□□□ 0.78
SMPD3-211ENST00000568373 SLC16A3O15427 465 aaKnown RBP19.95■□□□□ 0.78
SMPD3-211ENST00000568373 LMNB1P20700 586 aa19.95■□□□□ 0.78
SMPD3-211ENST00000568373 EPS15P42566 896 aa19.95■□□□□ 0.78
SMPD3-211ENST00000568373 HIRAP54198 1017 aaPredicted RBP19.95■□□□□ 0.78
SMPD3-211ENST00000568373 OAZ1P54368 228 aa19.95■□□□□ 0.78
SMPD3-211ENST00000568373 JAKMIP2Q96AA8 810 aa19.95■□□□□ 0.78
SMPD3-211ENST00000568373 LSM14BQ9BX40 385 aaKnown RBP19.95■□□□□ 0.78
SMPD3-211ENST00000568373 NUCKS1Q9H1E3 243 aaKnown RBP19.95■□□□□ 0.78
SMPD3-211ENST00000568373 ADAMTS5Q9UNA0 930 aa19.95■□□□□ 0.78
SMPD3-211ENST00000568373 UBE4BO95155 1302 aa19.95■□□□□ 0.78
SMPD3-211ENST00000568373 TGFB1I1O43294 461 aa19.95■□□□□ 0.78
SMPD3-211ENST00000568373 KRT86O43790 486 aa19.95■□□□□ 0.78
SMPD3-211ENST00000568373 AKAP3O75969 853 aa19.95■□□□□ 0.78
SMPD3-211ENST00000568373 MYCLP12524 364 aaPredicted RBP19.95■□□□□ 0.78
SMPD3-211ENST00000568373 DSG3P32926 999 aa19.95■□□□□ 0.78
SMPD3-211ENST00000568373 ARHGEF16Q5VV41 709 aa19.95■□□□□ 0.78
SMPD3-211ENST00000568373 FAM178BQ8IXR5 827 aa19.95■□□□□ 0.78
SMPD3-211ENST00000568373 CRACR2AQ9BSW2 395 aa19.95■□□□□ 0.78
SMPD3-211ENST00000568373 CDC23Q9UJX2 597 aa19.95■□□□□ 0.78
SMPD3-211ENST00000568373 YBX3P16989 372 aaKnown RBP eCLIP19.94■□□□□ 0.78
SMPD3-211ENST00000568373 BAATQ14032 418 aaPredicted RBP19.94■□□□□ 0.78
SMPD3-211ENST00000568373 SPA17Q15506 151 aa19.94■□□□□ 0.78
SMPD3-211ENST00000568373 NOL9Q5SY16 702 aaKnown RBP19.94■□□□□ 0.78
SMPD3-211ENST00000568373 STXBP4Q6ZWJ1 553 aa19.94■□□□□ 0.78
SMPD3-211ENST00000568373 ZNF720Q7Z2F6 126 aa19.94■□□□□ 0.78
SMPD3-211ENST00000568373 EHBP1Q8NDI1 1231 aa19.94■□□□□ 0.78
SMPD3-211ENST00000568373 METTL14Q9HCE5 456 aaKnown RBP19.94■□□□□ 0.78
SMPD3-211ENST00000568373 TFR2Q9UP52 801 aa19.94■□□□□ 0.78
SMPD3-211ENST00000568373 SAMM50Q9Y512 469 aa19.94■□□□□ 0.78
SMPD3-211ENST00000568373 ZNF263O14978 683 aa19.93■□□□□ 0.78
SMPD3-211ENST00000568373 LCA5LO95447 670 aa19.93■□□□□ 0.78
SMPD3-211ENST00000568373 EPB41P11171 864 aaKnown RBP19.93■□□□□ 0.78
SMPD3-211ENST00000568373 XRCC5P13010 732 aaKnown RBP19.93■□□□□ 0.78
SMPD3-211ENST00000568373 QARSP47897 775 aaKnown RBP19.93■□□□□ 0.78
SMPD3-211ENST00000568373 KIF11P52732 1056 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms