RNA–Protein interactions for RNA: ENST00000568365.1

SIRPB1-213, Transcript of signal regulatory protein beta 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SIRPB1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1-213ENST00000568365 CENPHQ9H3R5 247 aa10.27□□□□□ -0.76
SIRPB1-213ENST00000568365 BMP2KQ9NSY1 1161 aaPredicted RBP10.27□□□□□ -0.76
SIRPB1-213ENST00000568365 MCM8Q9UJA3 840 aa10.27□□□□□ -0.76
SIRPB1-213ENST00000568365 MINPP1Q9UNW1 487 aa10.27□□□□□ -0.76
SIRPB1-213ENST00000568365 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.27□□□□□ -0.76
SIRPB1-213ENST00000568365 NFS1Q9Y697 457 aa10.27□□□□□ -0.76
SIRPB1-213ENST00000568365 KDM3AQ9Y4C1 1321 aa10.27□□□□□ -0.77
SIRPB1-213ENST00000568365 EZRP15311 586 aaKnown RBP10.27□□□□□ -0.77
SIRPB1-213ENST00000568365 DNA2P51530 1060 aa10.27□□□□□ -0.77
SIRPB1-213ENST00000568365 ATP2B2Q01814 1243 aa10.27□□□□□ -0.77
SIRPB1-213ENST00000568365 ZNF844Q08AG5 666 aa10.27□□□□□ -0.77
SIRPB1-213ENST00000568365 COASYQ13057 564 aa10.27□□□□□ -0.77
SIRPB1-213ENST00000568365 SLC35G1Q2M3R5 365 aa10.27□□□□□ -0.77
SIRPB1-213ENST00000568365 ANKRD20A8PQ5CZ79 823 aa10.27□□□□□ -0.77
SIRPB1-213ENST00000568365 DALRD3Q5D0E6 543 aaKnown RBP10.27□□□□□ -0.77
SIRPB1-213ENST00000568365 FAM26FQ5R3K3 315 aa10.27□□□□□ -0.77
SIRPB1-213ENST00000568365 GKAP1Q5VSY0 366 aaPredicted RBP10.27□□□□□ -0.77
SIRPB1-213ENST00000568365 PPP4R3CPQ6ZMV5 832 aa10.27□□□□□ -0.77
SIRPB1-213ENST00000568365 DZIP1Q86YF9 867 aaKnown RBP10.27□□□□□ -0.77
SIRPB1-213ENST00000568365 TRIM59Q8IWR1 403 aa10.27□□□□□ -0.77
SIRPB1-213ENST00000568365 SYCE1Q8N0S2 351 aa10.27□□□□□ -0.77
SIRPB1-213ENST00000568365 UBLCP1Q8WVY7 318 aaPredicted RBP10.27□□□□□ -0.77
SIRPB1-213ENST00000568365 RPGRQ92834 1020 aaKnown RBP10.27□□□□□ -0.77
SIRPB1-213ENST00000568365 SEC16BQ96JE7 1060 aa10.27□□□□□ -0.77
SIRPB1-213ENST00000568365 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.27□□□□□ -0.77
SIRPB1-213ENST00000568365 ANKRD2Q9GZV1 360 aa10.27□□□□□ -0.77
SIRPB1-213ENST00000568365 DDX20Q9UHI6 824 aaKnown RBP10.27□□□□□ -0.77
SIRPB1-213ENST00000568365 DDX60LQ5H9U9 1706 aaKnown RBP10.26□□□□□ -0.77
SIRPB1-213ENST00000568365 A0A087X0T9 212 aa10.26□□□□□ -0.77
SIRPB1-213ENST00000568365 A0A0A6YYK5 440 aaPredicted RBP10.26□□□□□ -0.77
SIRPB1-213ENST00000568365 CEP104O60308 925 aa10.26□□□□□ -0.77
SIRPB1-213ENST00000568365 DNAJC8O75937 253 aaPredicted RBP10.26□□□□□ -0.77
SIRPB1-213ENST00000568365 FAM228BP0C875 321 aa10.26□□□□□ -0.77
SIRPB1-213ENST00000568365 ECHS1P30084 290 aa10.26□□□□□ -0.77
SIRPB1-213ENST00000568365 ELF1P32519 619 aa10.26□□□□□ -0.77
SIRPB1-213ENST00000568365 GSTO1P78417 241 aa10.26□□□□□ -0.77
SIRPB1-213ENST00000568365 UAP1Q16222 522 aaPredicted RBP10.26□□□□□ -0.77
SIRPB1-213ENST00000568365 PPP2R5EQ16537 467 aa10.26□□□□□ -0.77
SIRPB1-213ENST00000568365 NBPF9Q3BBW0 867 aa10.26□□□□□ -0.77
SIRPB1-213ENST00000568365 CCDC65Q8IXS2 484 aa10.26□□□□□ -0.77
SIRPB1-213ENST00000568365 TTLL6Q8N841 843 aa10.26□□□□□ -0.77
SIRPB1-213ENST00000568365 CNKSR1Q969H4 720 aa10.26□□□□□ -0.77
SIRPB1-213ENST00000568365 CENPTQ96BT3 561 aa10.26□□□□□ -0.77
SIRPB1-213ENST00000568365 SGSM3Q96HU1 749 aa10.26□□□□□ -0.77
SIRPB1-213ENST00000568365 NT5C3AQ9H0P0 336 aa10.26□□□□□ -0.77
SIRPB1-213ENST00000568365 GANQ9H2C0 597 aa10.26□□□□□ -0.77
SIRPB1-213ENST00000568365 KDM4CQ9H3R0 1056 aa10.26□□□□□ -0.77
SIRPB1-213ENST00000568365 CD248Q9HCU0 757 aa10.26□□□□□ -0.77
SIRPB1-213ENST00000568365 PANK4Q9NVE7 773 aa10.26□□□□□ -0.77
SIRPB1-213ENST00000568365 ZNF219Q9P2Y4 722 aaPredicted RBP10.26□□□□□ -0.77
SIRPB1-213ENST00000568365 PACSIN2Q9UNF0 486 aaPredicted RBP10.26□□□□□ -0.77
SIRPB1-213ENST00000568365 CEP83Q9Y592 693 aa10.26□□□□□ -0.77
SIRPB1-213ENST00000568365 USP17L3A6NCW0 530 aa10.25□□□□□ -0.77
SIRPB1-213ENST00000568365 USP17L4A6NCW7 530 aa10.25□□□□□ -0.77
SIRPB1-213ENST00000568365 SART1O43290 800 aaKnown RBP10.25□□□□□ -0.77
SIRPB1-213ENST00000568365 FLOT1O75955 427 aa10.25□□□□□ -0.77
SIRPB1-213ENST00000568365 BAG3O95817 575 aa10.25□□□□□ -0.77
SIRPB1-213ENST00000568365 PRDX5P30044 214 aa10.25□□□□□ -0.77
SIRPB1-213ENST00000568365 HOXA10P31260 410 aaPredicted RBP10.25□□□□□ -0.77
SIRPB1-213ENST00000568365 APLP1P51693 650 aa10.25□□□□□ -0.77
SIRPB1-213ENST00000568365 NPEPPSP55786 919 aa10.25□□□□□ -0.77
SIRPB1-213ENST00000568365 CLUL1Q15846 466 aa10.25□□□□□ -0.77
SIRPB1-213ENST00000568365 EDRF1Q3B7T1 1238 aa10.25□□□□□ -0.77
SIRPB1-213ENST00000568365 CYB5D1Q6P9G0 228 aa10.25□□□□□ -0.77
SIRPB1-213ENST00000568365 USP17L1Q7RTZ2 530 aa10.25□□□□□ -0.77
SIRPB1-213ENST00000568365 CPLX4Q7Z7G2 160 aa10.25□□□□□ -0.77
SIRPB1-213ENST00000568365 CROCCP2Q86T23 111 aa10.25□□□□□ -0.77
SIRPB1-213ENST00000568365 SLC51AQ86UW1 340 aa10.25□□□□□ -0.77
SIRPB1-213ENST00000568365 VPS36Q86VN1 386 aa10.25□□□□□ -0.77
SIRPB1-213ENST00000568365 HOOK3Q86VS8 718 aa10.25□□□□□ -0.77
SIRPB1-213ENST00000568365 ZC3H3Q8IXZ2 948 aaKnown RBP10.25□□□□□ -0.77
SIRPB1-213ENST00000568365 RASGEF1CQ8N431 466 aa10.25□□□□□ -0.77
SIRPB1-213ENST00000568365 DNAJC5GQ8N7S2 189 aa10.25□□□□□ -0.77
SIRPB1-213ENST00000568365 FAM133AQ8N9E0 248 aa10.25□□□□□ -0.77
SIRPB1-213ENST00000568365 TATDN2Q93075 761 aa10.25□□□□□ -0.77
SIRPB1-213ENST00000568365 RBM17Q96I25 401 aaKnown RBP10.25□□□□□ -0.77
SIRPB1-213ENST00000568365 PSMD1Q99460 953 aa10.25□□□□□ -0.77
SIRPB1-213ENST00000568365 NAP1L4Q99733 375 aaKnown RBP10.25□□□□□ -0.77
SIRPB1-213ENST00000568365 BCCIPQ9P287 314 aaKnown RBP eCLIP10.25□□□□□ -0.77
SIRPB1-213ENST00000568365 ADAMTS1Q9UHI8 967 aa10.25□□□□□ -0.77
SIRPB1-213ENST00000568365 FBXL5Q9UKA1 691 aa10.25□□□□□ -0.77
SIRPB1-213ENST00000568365 INTUQ9ULD6 942 aa10.25□□□□□ -0.77
SIRPB1-213ENST00000568365 STX8Q9UNK0 236 aa10.25□□□□□ -0.77
SIRPB1-213ENST00000568365 NOVA2Q9UNW9 492 aaKnown RBP10.25□□□□□ -0.77
SIRPB1-213ENST00000568365 DIS3Q9Y2L1 958 aaKnown RBP10.25□□□□□ -0.77
SIRPB1-213ENST00000568365 UTP11Q9Y3A2 253 aaKnown RBP10.25□□□□□ -0.77
SIRPB1-213ENST00000568365 NOC2LQ9Y3T9 749 aaKnown RBP10.25□□□□□ -0.77
SIRPB1-213ENST00000568365 KRIT1O00522 736 aa10.24□□□□□ -0.77
SIRPB1-213ENST00000568365 ADCY7P51828 1080 aa10.24□□□□□ -0.77
SIRPB1-213ENST00000568365 RNASE9P60153 205 aaKnown RBP10.24□□□□□ -0.77
SIRPB1-213ENST00000568365 XRCC4Q13426 336 aa10.24□□□□□ -0.77
SIRPB1-213ENST00000568365 LRRC41Q15345 812 aa10.24□□□□□ -0.77
SIRPB1-213ENST00000568365 KRT71Q3SY84 523 aa10.24□□□□□ -0.77
SIRPB1-213ENST00000568365 PPP1R18Q6NYC8 613 aa10.24□□□□□ -0.77
SIRPB1-213ENST00000568365 GPIHBP1Q8IV16 184 aa10.24□□□□□ -0.77
SIRPB1-213ENST00000568365 FUKQ8N0W3 1084 aa10.24□□□□□ -0.77
SIRPB1-213ENST00000568365 SEC14L1Q92503 715 aa10.24□□□□□ -0.77
SIRPB1-213ENST00000568365 RAPGEF5Q92565 580 aa10.24□□□□□ -0.77
SIRPB1-213ENST00000568365 DNAJC19Q96DA6 116 aa10.24□□□□□ -0.77
SIRPB1-213ENST00000568365 DYNLL2Q96FJ2 89 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms