RNA–Protein interactions for RNA: ENST00000568358.1

HERPUD1-213, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-213ENST00000568358 ESYT1Q9BSJ8 1104 aa5.34□□□□□ -1.55
HERPUD1-213ENST00000568358 C16orf70Q9BSU1 422 aa5.34□□□□□ -1.55
HERPUD1-213ENST00000568358 MYL10Q9BUA6 226 aa5.34□□□□□ -1.55
HERPUD1-213ENST00000568358 GLT8D2Q9H1C3 349 aa5.34□□□□□ -1.55
HERPUD1-213ENST00000568358 CERS4Q9HA82 394 aa5.34□□□□□ -1.55
HERPUD1-213ENST00000568358 SENP2Q9HC62 589 aa5.34□□□□□ -1.55
HERPUD1-213ENST00000568358 RBM28Q9NW13 759 aaKnown RBP5.34□□□□□ -1.55
HERPUD1-213ENST00000568358 BRPF3Q9ULD4 1205 aa5.34□□□□□ -1.55
HERPUD1-213ENST00000568358 NAP1L2Q9ULW6 460 aaPredicted RBP5.34□□□□□ -1.55
HERPUD1-213ENST00000568358 PPME1Q9Y570 386 aa5.34□□□□□ -1.55
HERPUD1-213ENST00000568358 INSL6Q9Y581 213 aa5.34□□□□□ -1.55
HERPUD1-213ENST00000568358 PCDHGA10Q9Y5H3 936 aa5.34□□□□□ -1.55
HERPUD1-213ENST00000568358 MICAL3Q7RTP6 2002 aa5.34□□□□□ -1.55
HERPUD1-213ENST00000568358 EVPLQ92817 2033 aa5.33□□□□□ -1.56
HERPUD1-213ENST00000568358 LOXHD1Q8IVV2 1947 aa5.33□□□□□ -1.56
HERPUD1-213ENST00000568358 NRCAMQ92823 1304 aa5.33□□□□□ -1.56
HERPUD1-213ENST00000568358 CCDC196A0A1B0GTZ2 297 aa5.33□□□□□ -1.56
HERPUD1-213ENST00000568358 M0QZ92 97 aa5.33□□□□□ -1.56
HERPUD1-213ENST00000568358 SH2B2O14492 632 aaPredicted RBP5.33□□□□□ -1.56
HERPUD1-213ENST00000568358 TREHO43280 583 aa5.33□□□□□ -1.56
HERPUD1-213ENST00000568358 NBNO60934 754 aa5.33□□□□□ -1.56
HERPUD1-213ENST00000568358 FOSP01100 380 aaPredicted RBP5.33□□□□□ -1.56
HERPUD1-213ENST00000568358 CXCL10P02778 98 aa5.33□□□□□ -1.56
HERPUD1-213ENST00000568358 LGALS2P05162 132 aa5.33□□□□□ -1.56
HERPUD1-213ENST00000568358 RPLP2P05387 115 aaKnown RBP5.33□□□□□ -1.56
HERPUD1-213ENST00000568358 SMIM10L2AP0DMW4 78 aa5.33□□□□□ -1.56
HERPUD1-213ENST00000568358 SMIM10L2BP0DMW5 78 aa5.33□□□□□ -1.56
HERPUD1-213ENST00000568358 HOXD8P13378 290 aaPredicted RBP5.33□□□□□ -1.56
HERPUD1-213ENST00000568358 ZNF76P36508 570 aa5.33□□□□□ -1.56
HERPUD1-213ENST00000568358 ANTXR2P58335 489 aa5.33□□□□□ -1.56
HERPUD1-213ENST00000568358 WDR5P61964 334 aaKnown RBP5.33□□□□□ -1.56
HERPUD1-213ENST00000568358 MRPS9P82933 396 aaKnown RBP5.33□□□□□ -1.56
HERPUD1-213ENST00000568358 ARHGAP4P98171 946 aa5.33□□□□□ -1.56
HERPUD1-213ENST00000568358 ZNF200P98182 395 aaPredicted RBP5.33□□□□□ -1.56
HERPUD1-213ENST00000568358 TAP1Q03518 808 aa5.33□□□□□ -1.56
HERPUD1-213ENST00000568358 RBL2Q08999 1139 aa5.33□□□□□ -1.56
HERPUD1-213ENST00000568358 SEMA3FQ13275 785 aa5.33□□□□□ -1.56
HERPUD1-213ENST00000568358 MTMR1Q13613 665 aa5.33□□□□□ -1.56
HERPUD1-213ENST00000568358 ADGRE1Q14246 886 aa5.33□□□□□ -1.56
HERPUD1-213ENST00000568358 NECTIN1Q15223 517 aa5.33□□□□□ -1.56
HERPUD1-213ENST00000568358 SWI5Q1ZZU3 235 aa5.33□□□□□ -1.56
HERPUD1-213ENST00000568358 BMP2KLQ5H9B9 411 aa5.33□□□□□ -1.56
HERPUD1-213ENST00000568358 FAM117BQ6P1L5 589 aa5.33□□□□□ -1.56
HERPUD1-213ENST00000568358 CENPQQ7L2Z9 268 aaPredicted RBP5.33□□□□□ -1.56
HERPUD1-213ENST00000568358 DHX32Q7L7V1 743 aaKnown RBP5.33□□□□□ -1.56
HERPUD1-213ENST00000568358 HEATR3Q7Z4Q2 680 aa5.33□□□□□ -1.56
HERPUD1-213ENST00000568358 SERINC5Q86VE9 423 aa5.33□□□□□ -1.56
HERPUD1-213ENST00000568358 MICU3Q86XE3 530 aa5.33□□□□□ -1.56
HERPUD1-213ENST00000568358 TEX2Q8IWB9 1127 aa5.33□□□□□ -1.56
HERPUD1-213ENST00000568358 MYOCDQ8IZQ8 938 aa5.33□□□□□ -1.56
HERPUD1-213ENST00000568358 SRBD1Q8N5C6 995 aaKnown RBP5.33□□□□□ -1.56
HERPUD1-213ENST00000568358 USP38Q8NB14 1042 aa5.33□□□□□ -1.56
HERPUD1-213ENST00000568358 IL31RAQ8NI17 732 aa5.33□□□□□ -1.56
HERPUD1-213ENST00000568358 MICAL1Q8TDZ2 1067 aa5.33□□□□□ -1.56
HERPUD1-213ENST00000568358 SEPT1Q8WYJ6 367 aa5.33□□□□□ -1.56
HERPUD1-213ENST00000568358 APBB2Q92870 758 aa5.33□□□□□ -1.56
HERPUD1-213ENST00000568358 GLG1Q92896 1179 aa5.33□□□□□ -1.56
HERPUD1-213ENST00000568358 HLA-CQ95604 372 aa5.33□□□□□ -1.56
HERPUD1-213ENST00000568358 GPRASP2Q96D09 838 aa5.33□□□□□ -1.56
HERPUD1-213ENST00000568358 INPP4AQ96PE3 977 aaPredicted RBP5.33□□□□□ -1.56
HERPUD1-213ENST00000568358 TGS1Q96RS0 853 aaKnown RBP5.33□□□□□ -1.56
HERPUD1-213ENST00000568358 YME1L1Q96TA2 773 aa5.33□□□□□ -1.56
HERPUD1-213ENST00000568358 GPR20Q99678 358 aa5.33□□□□□ -1.56
HERPUD1-213ENST00000568358 SDF4Q9BRK5 362 aa5.33□□□□□ -1.56
HERPUD1-213ENST00000568358 BACH2Q9BYV9 841 aa5.33□□□□□ -1.56
HERPUD1-213ENST00000568358 LSG1Q9H089 658 aaKnown RBP5.33□□□□□ -1.56
HERPUD1-213ENST00000568358 RNPEPQ9H4A4 650 aa5.33□□□□□ -1.56
HERPUD1-213ENST00000568358 SMARCAD1Q9H4L7 1026 aa5.33□□□□□ -1.56
HERPUD1-213ENST00000568358 AZI2Q9H6S1 392 aa5.33□□□□□ -1.56
HERPUD1-213ENST00000568358 METTL14Q9HCE5 456 aaKnown RBP5.33□□□□□ -1.56
HERPUD1-213ENST00000568358 ERAP1Q9NZ08 941 aa5.33□□□□□ -1.56
HERPUD1-213ENST00000568358 LMCD1Q9NZU5 365 aa5.33□□□□□ -1.56
HERPUD1-213ENST00000568358 BCCIPQ9P287 314 aaKnown RBP eCLIP5.33□□□□□ -1.56
HERPUD1-213ENST00000568358 COG5Q9UP83 839 aa5.33□□□□□ -1.56
HERPUD1-213ENST00000568358 TMA7Q9Y2S6 64 aaKnown RBP5.33□□□□□ -1.56
HERPUD1-213ENST00000568358 A0A0C4DFX4 3053 aa5.33□□□□□ -1.56
HERPUD1-213ENST00000568358 RRN3P2A6NIE6 340 aa5.32□□□□□ -1.56
HERPUD1-213ENST00000568358 PPP1R3GB7ZBB8 358 aa5.32□□□□□ -1.56
HERPUD1-213ENST00000568358 BHMG1C9JSJ3 638 aaPredicted RBP5.32□□□□□ -1.56
HERPUD1-213ENST00000568358 hCG_1984214I3L0E3 225 aa5.32□□□□□ -1.56
HERPUD1-213ENST00000568358 RFXAPO00287 272 aa5.32□□□□□ -1.56
HERPUD1-213ENST00000568358 MEIS2O14770 477 aa5.32□□□□□ -1.56
HERPUD1-213ENST00000568358 ZBTB43O43298 467 aa5.32□□□□□ -1.56
HERPUD1-213ENST00000568358 UPP2O95045 317 aa5.32□□□□□ -1.56
HERPUD1-213ENST00000568358 GJB5O95377 273 aa5.32□□□□□ -1.56
HERPUD1-213ENST00000568358 PLEKHA8P1O95397 391 aa5.32□□□□□ -1.56
HERPUD1-213ENST00000568358 RXRAP19793 462 aa5.32□□□□□ -1.56
HERPUD1-213ENST00000568358 POU3F3P20264 500 aaPredicted RBP5.32□□□□□ -1.56
HERPUD1-213ENST00000568358 TCF7P36402 384 aaPredicted RBP5.32□□□□□ -1.56
HERPUD1-213ENST00000568358 ADCY7P51828 1080 aa5.32□□□□□ -1.56
HERPUD1-213ENST00000568358 NAPAP54920 295 aa5.32□□□□□ -1.56
HERPUD1-213ENST00000568358 AKAP17AQ02040 695 aaKnown RBP5.32□□□□□ -1.56
HERPUD1-213ENST00000568358 RTN1Q16799 776 aa5.32□□□□□ -1.56
HERPUD1-213ENST00000568358 PTPROQ16827 1216 aa5.32□□□□□ -1.56
HERPUD1-213ENST00000568358 CSPP1Q1MSJ5 1256 aa5.32□□□□□ -1.56
HERPUD1-213ENST00000568358 PLEKHG4Q58EX7 1191 aa5.32□□□□□ -1.56
HERPUD1-213ENST00000568358 CCDC181Q5TID7 509 aa5.32□□□□□ -1.56
HERPUD1-213ENST00000568358 IER5Q5VY09 327 aa5.32□□□□□ -1.56
HERPUD1-213ENST00000568358 MCTP2Q6DN12 878 aa5.32□□□□□ -1.56
HERPUD1-213ENST00000568358 TYW1BQ6NUM6 668 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms