RNA–Protein interactions for RNA: ENST00000568310.1

DNAAF4-CCPG1-202, Transcript of DNAAF4-CCPG1 readthrough (NMD candidate), humanhuman

TSL 2

Gene DNAAF4-CCPG1, Length 1,293 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF4-CCPG1-202ENST00000568310 PRICKLE3O43900 615 aaPredicted RBP10.27□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 GRK2P25098 689 aa10.27□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 GTF2F1P35269 517 aaKnown RBP eCLIP10.27□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 GRK3P35626 688 aa10.27□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 GPR85P60893 370 aa10.27□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 UBXN11Q5T124 520 aa10.27□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 TEPPQ6URK8 271 aa10.27□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 DPH6Q7L8W6 267 aa10.27□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 IFNL3Q8IZI9 196 aa10.27□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 PIP4K2CQ8TBX8 421 aa10.27□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 SIRPGQ9P1W8 387 aa10.27□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 ASH2LQ9UBL3 628 aa10.27□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 LRG1P02750 347 aa10.26□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 CELA3BP08861 270 aa10.26□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 ADAM9Q13443 819 aa10.26□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 RTP5Q14D33 572 aa10.26□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 PRR31Q5SQ13 230 aa10.26□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 OTOP3Q7RTS5 596 aa10.26□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 TRIM48Q8IWZ4 208 aa10.26□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 HIRIP3Q9BW71 556 aaPredicted RBP10.26□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 ADGRB3O60242 1522 aa10.26□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 KCNA6P17658 529 aa10.25□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 FERMT3Q86UX7 667 aa10.25□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.25□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 DDX1Q92499 740 aaKnown RBP10.25□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 LNPKQ9C0E8 428 aa10.25□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 PFDN2Q9UHV9 154 aa10.25□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 MED1Q15648 1581 aaPredicted RBP10.25□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 KDM5AP29375 1690 aaKnown RBP10.25□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 RPRD2Q5VT52 1461 aaKnown RBP10.24□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 SLC27A2O14975 620 aa10.24□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 ADCY3O60266 1144 aa10.24□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 SSRP1Q08945 709 aaKnown RBP10.24□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 SKOR2Q2VWA4 1001 aaPredicted RBP10.24□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 SCUBE1Q8IWY4 988 aa10.24□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 ARMC5Q96C12 935 aa10.24□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 KCNJ15Q99712 375 aa10.24□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 CDC6Q99741 560 aa10.24□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 DUSP10Q9Y6W6 482 aa10.24□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 TET3O43151 1660 aa10.24□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 TMEM94Q12767 1356 aa10.24□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 ROCK1Q13464 1354 aa10.24□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 XIRP1Q702N8 1843 aaKnown RBP10.23□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 DDX3XO00571 662 aaKnown RBP eCLIP10.23□□□□□ -0.777e-7■■■■■ 32.8
DNAAF4-CCPG1-202ENST00000568310 GNAT1P11488 350 aa10.23□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 SPIRE1Q08AE8 756 aa10.23□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 RGL3Q3MIN7 710 aa10.23□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 FAM26FQ5R3K3 315 aa10.23□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 BDH2Q9BUT1 245 aa10.23□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 NUP155O75694 1391 aa10.23□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 RIMS2Q9UQ26 1411 aa10.23□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 UNC13BO14795 1591 aa10.22□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 SOD2P04179 222 aa10.22□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 COL6A2P12110 1019 aa10.22□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 CNR2P34972 360 aa10.22□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 MCTP2Q6DN12 878 aa10.22□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 ZBTB38Q8NAP3 1195 aaPredicted RBP10.22□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 TTLL11Q8NHH1 800 aa10.22□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 CLEC4DQ8WXI8 215 aa10.22□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 CLIC6Q96NY7 704 aa10.22□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 TMEM209Q96SK2 561 aa10.22□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 HSPBP1Q9NZL4 362 aa10.22□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 NUB1Q9Y5A7 615 aa10.22□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 ZFYVE9O95405 1425 aa10.22□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 GCC2Q8IWJ2 1684 aa10.22□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 MYO5BQ9ULV0 1848 aa10.21□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 FAM47E-STBD1D6RA91 191 aa10.21□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 PLP2Q04941 152 aa10.21□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 RBL2Q08999 1139 aa10.21□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 KIAA2012Q0VF49 1180 aa10.21□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 PRAMEF18Q5VWM3 479 aa10.21□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 ZSWIM3Q96MP5 696 aa10.21□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 IPO9Q96P70 1041 aaKnown RBP10.21□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 ALG1Q9BT22 464 aa10.21□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 TRAF6Q9Y4K3 522 aa10.21□□□□□ -0.77
DNAAF4-CCPG1-202ENST00000568310 TMEM131LA2VDJ0 1609 aa10.21□□□□□ -0.78
DNAAF4-CCPG1-202ENST00000568310 E9PCH4 1651 aa10.21□□□□□ -0.78
DNAAF4-CCPG1-202ENST00000568310 TRBV23-1A0A0A0MS06 115 aa10.2□□□□□ -0.78
DNAAF4-CCPG1-202ENST00000568310 DIAPH1O60610 1272 aaKnown RBP10.2□□□□□ -0.78
DNAAF4-CCPG1-202ENST00000568310 GRIN1Q05586 938 aa10.2□□□□□ -0.78
DNAAF4-CCPG1-202ENST00000568310 RBM12BQ8IXT5 1001 aaKnown RBP10.2□□□□□ -0.78
DNAAF4-CCPG1-202ENST00000568310 TXNDC5Q8NBS9 432 aaKnown RBP10.2□□□□□ -0.78
DNAAF4-CCPG1-202ENST00000568310 UHMK1Q8TAS1 419 aaKnown RBP10.2□□□□□ -0.78
DNAAF4-CCPG1-202ENST00000568310 PLEKHG1Q9ULL1 1385 aa10.2□□□□□ -0.78
DNAAF4-CCPG1-202ENST00000568310 WASF3Q9UPY6 502 aa10.2□□□□□ -0.78
DNAAF4-CCPG1-202ENST00000568310 IQGAP3Q86VI3 1631 aa10.19□□□□□ -0.78
DNAAF4-CCPG1-202ENST00000568310 MROH6A6NGR9 719 aa10.19□□□□□ -0.78
DNAAF4-CCPG1-202ENST00000568310 NKRFO15226 690 aaKnown RBP eCLIP10.19□□□□□ -0.78
DNAAF4-CCPG1-202ENST00000568310 CYP7B1O75881 506 aa10.19□□□□□ -0.78
DNAAF4-CCPG1-202ENST00000568310 ZNF28P17035 718 aa10.19□□□□□ -0.78
DNAAF4-CCPG1-202ENST00000568310 SUMO1P63165 101 aaKnown RBP10.19□□□□□ -0.78
DNAAF4-CCPG1-202ENST00000568310 TUSC3Q13454 348 aa10.19□□□□□ -0.78
DNAAF4-CCPG1-202ENST00000568310 SERINC3Q13530 473 aa10.19□□□□□ -0.78
DNAAF4-CCPG1-202ENST00000568310 HABP4Q5JVS0 413 aaKnown RBP10.19□□□□□ -0.78
DNAAF4-CCPG1-202ENST00000568310 FAM209AQ5JX71 171 aa10.19□□□□□ -0.78
DNAAF4-CCPG1-202ENST00000568310 TMC5Q6UXY8 1006 aa10.19□□□□□ -0.78
DNAAF4-CCPG1-202ENST00000568310 MAMDC2Q7Z304 686 aaPredicted RBP10.19□□□□□ -0.78
DNAAF4-CCPG1-202ENST00000568310 FAM124AQ86V42 546 aa10.19□□□□□ -0.78
DNAAF4-CCPG1-202ENST00000568310 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.19□□□□□ -0.78
DNAAF4-CCPG1-202ENST00000568310 PTPRN2Q92932 1015 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms