RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 CRYGNQ8WXF5 182 aa5.45□□□□□ -1.54
CLK3-219ENST00000567805 SEPT8Q92599 483 aa5.45□□□□□ -1.54
CLK3-219ENST00000567805 GLG1Q92896 1179 aa5.45□□□□□ -1.54
CLK3-219ENST00000567805 TNPO1Q92973 898 aaKnown RBP5.45□□□□□ -1.54
CLK3-219ENST00000567805 SLC26A6Q9BXS9 759 aa5.45□□□□□ -1.54
CLK3-219ENST00000567805 PRDM12Q9H4Q4 367 aa5.45□□□□□ -1.54
CLK3-219ENST00000567805 AZI2Q9H6S1 392 aa5.45□□□□□ -1.54
CLK3-219ENST00000567805 AGO4Q9HCK5 861 aaKnown RBP5.45□□□□□ -1.54
CLK3-219ENST00000567805 SH3GLB2Q9NR46 395 aa5.45□□□□□ -1.54
CLK3-219ENST00000567805 TMEM260Q9NX78 707 aa5.45□□□□□ -1.54
CLK3-219ENST00000567805 TUBE1Q9UJT0 475 aa5.45□□□□□ -1.54
CLK3-219ENST00000567805 IGLV3-22A0A075B6J6 115 aa5.44□□□□□ -1.54
CLK3-219ENST00000567805 IGKV6D-21A0A0A0MT36 114 aa5.44□□□□□ -1.54
CLK3-219ENST00000567805 MBLAC1A4D2B0 266 aaPredicted RBP5.44□□□□□ -1.54
CLK3-219ENST00000567805 RRN3P2A6NIE6 340 aa5.44□□□□□ -1.54
CLK3-219ENST00000567805 FAM86B1E9PN63 330 aa5.44□□□□□ -1.54
CLK3-219ENST00000567805 TULP1O00294 542 aaPredicted RBP5.44□□□□□ -1.54
CLK3-219ENST00000567805 IPO5O00410 1097 aaKnown RBP5.44□□□□□ -1.54
CLK3-219ENST00000567805 DLL1O00548 723 aa5.44□□□□□ -1.54
CLK3-219ENST00000567805 CPLX1O14810 134 aa5.44□□□□□ -1.54
CLK3-219ENST00000567805 ATG7O95352 703 aa5.44□□□□□ -1.54
CLK3-219ENST00000567805 GJB5O95377 273 aa5.44□□□□□ -1.54
CLK3-219ENST00000567805 CENPBP07199 599 aaPredicted RBP5.44□□□□□ -1.54
CLK3-219ENST00000567805 CTSHP09668 335 aa5.44□□□□□ -1.54
CLK3-219ENST00000567805 FAM86B2P0C5J1 330 aa5.44□□□□□ -1.54
CLK3-219ENST00000567805 IGFBP4P22692 258 aa5.44□□□□□ -1.54
CLK3-219ENST00000567805 CIITAP33076 1130 aa5.44□□□□□ -1.54
CLK3-219ENST00000567805 STAT5BP51692 787 aa5.44□□□□□ -1.54
CLK3-219ENST00000567805 ANAPC15P60006 121 aa5.44□□□□□ -1.54
CLK3-219ENST00000567805 TAP1Q03518 808 aa5.44□□□□□ -1.54
CLK3-219ENST00000567805 SSRP1Q08945 709 aaKnown RBP5.44□□□□□ -1.54
CLK3-219ENST00000567805 GRIK4Q16099 956 aa5.44□□□□□ -1.54
CLK3-219ENST00000567805 TCTN1Q2MV58 587 aa5.44□□□□□ -1.54
CLK3-219ENST00000567805 FAM26DQ5JW98 314 aa5.44□□□□□ -1.54
CLK3-219ENST00000567805 MARCH8Q5T0T0 291 aa5.44□□□□□ -1.54
CLK3-219ENST00000567805 CPLX2Q6PUV4 134 aaKnown RBP5.44□□□□□ -1.54
CLK3-219ENST00000567805 RSPH3Q86UC2 560 aa5.44□□□□□ -1.54
CLK3-219ENST00000567805 PLA2G4DQ86XP0 818 aa5.44□□□□□ -1.54
CLK3-219ENST00000567805 DBF4BQ8NFT6 615 aa5.44□□□□□ -1.54
CLK3-219ENST00000567805 APBB2Q92870 758 aa5.44□□□□□ -1.54
CLK3-219ENST00000567805 PCYT2Q99447 389 aa5.44□□□□□ -1.54
CLK3-219ENST00000567805 RAD9AQ99638 391 aa5.44□□□□□ -1.54
CLK3-219ENST00000567805 ZBED2Q9BTP6 218 aa5.44□□□□□ -1.54
CLK3-219ENST00000567805 IFIH1Q9BYX4 1025 aaKnown RBP5.44□□□□□ -1.54
CLK3-219ENST00000567805 UPF3BQ9BZI7 483 aaKnown RBP5.44□□□□□ -1.54
CLK3-219ENST00000567805 NCOA5Q9HCD5 579 aaKnown RBP5.44□□□□□ -1.54
CLK3-219ENST00000567805 TBC1D22BQ9NU19 505 aa5.44□□□□□ -1.54
CLK3-219ENST00000567805 PDRG1Q9NUG6 133 aa5.44□□□□□ -1.54
CLK3-219ENST00000567805 VPS54Q9P1Q0 977 aa5.44□□□□□ -1.54
CLK3-219ENST00000567805 KIAA1671Q9BY89 1806 aa5.44□□□□□ -1.54
CLK3-219ENST00000567805 ATG2AQ2TAZ0 1938 aa5.43□□□□□ -1.54
CLK3-219ENST00000567805 BACH1O14867 736 aa5.43□□□□□ -1.54
CLK3-219ENST00000567805 ADAMTS3O15072 1205 aa5.43□□□□□ -1.54
CLK3-219ENST00000567805 DHX15O43143 795 aaKnown RBP5.43□□□□□ -1.54
CLK3-219ENST00000567805 HBP1O60381 514 aa5.43□□□□□ -1.54
CLK3-219ENST00000567805 PPFIA3O75145 1194 aa5.43□□□□□ -1.54
CLK3-219ENST00000567805 CDKL5O76039 1030 aa5.43□□□□□ -1.54
CLK3-219ENST00000567805 DEXIO95424 95 aa5.43□□□□□ -1.54
CLK3-219ENST00000567805 CCNE2O96020 404 aa5.43□□□□□ -1.54
CLK3-219ENST00000567805 CHRNA1P02708 482 aa5.43□□□□□ -1.54
CLK3-219ENST00000567805 AMHP03971 560 aa5.43□□□□□ -1.54
CLK3-219ENST00000567805 INSRRP14616 1297 aa5.43□□□□□ -1.54
CLK3-219ENST00000567805 POU3F3P20264 500 aaPredicted RBP5.43□□□□□ -1.54
CLK3-219ENST00000567805 USP11P51784 963 aa5.43□□□□□ -1.54
CLK3-219ENST00000567805 NLRP5P59047 1200 aa5.43□□□□□ -1.54
CLK3-219ENST00000567805 IGBP1P78318 339 aa5.43□□□□□ -1.54
CLK3-219ENST00000567805 KRT76Q01546 638 aa5.43□□□□□ -1.54
CLK3-219ENST00000567805 MGAT3Q09327 533 aa5.43□□□□□ -1.54
CLK3-219ENST00000567805 STK3Q13188 491 aa5.43□□□□□ -1.54
CLK3-219ENST00000567805 ADGRE1Q14246 886 aa5.43□□□□□ -1.54
CLK3-219ENST00000567805 PLCB4Q15147 1175 aa5.43□□□□□ -1.54
CLK3-219ENST00000567805 ANKRD1Q15327 319 aa5.43□□□□□ -1.54
CLK3-219ENST00000567805 IER5Q5VY09 327 aa5.43□□□□□ -1.54
CLK3-219ENST00000567805 FAM160B1Q5W0V3 765 aa5.43□□□□□ -1.54
CLK3-219ENST00000567805 GALNT17Q6IS24 598 aa5.43□□□□□ -1.54
CLK3-219ENST00000567805 ZNF746Q6NUN9 644 aaPredicted RBP5.43□□□□□ -1.54
CLK3-219ENST00000567805 MIS18BP1Q6P0N0 1132 aa5.43□□□□□ -1.54
CLK3-219ENST00000567805 ABHD15Q6UXT9 468 aa5.43□□□□□ -1.54
CLK3-219ENST00000567805 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.43□□□□□ -1.54
CLK3-219ENST00000567805 RUFY4Q6ZNE9 571 aa5.43□□□□□ -1.54
CLK3-219ENST00000567805 TMCO2Q7Z6W1 182 aaPredicted RBP5.43□□□□□ -1.54
CLK3-219ENST00000567805 CCDC60Q8IWA6 550 aaPredicted RBP5.43□□□□□ -1.54
CLK3-219ENST00000567805 SMAP1Q8IYB5 467 aaPredicted RBP5.43□□□□□ -1.54
CLK3-219ENST00000567805 MYOCDQ8IZQ8 938 aa5.43□□□□□ -1.54
CLK3-219ENST00000567805 USP38Q8NB14 1042 aa5.43□□□□□ -1.54
CLK3-219ENST00000567805 RASGRP4Q8TDF6 673 aa5.43□□□□□ -1.54
CLK3-219ENST00000567805 ATP8B4Q8TF62 1192 aa5.43□□□□□ -1.54
CLK3-219ENST00000567805 DNAJB3Q8WWF6 145 aa5.43□□□□□ -1.54
CLK3-219ENST00000567805 TOP1MTQ969P6 601 aa5.43□□□□□ -1.54
CLK3-219ENST00000567805 IL17RAQ96F46 866 aa5.43□□□□□ -1.54
CLK3-219ENST00000567805 ZNF577Q9BSK1 485 aa5.43□□□□□ -1.54
CLK3-219ENST00000567805 C22orf23Q9BZE7 217 aa5.43□□□□□ -1.54
CLK3-219ENST00000567805 TCEAL9Q9UHQ7 104 aa5.43□□□□□ -1.54
CLK3-219ENST00000567805 PCDHA4Q9UN74 947 aa5.43□□□□□ -1.54
CLK3-219ENST00000567805 INSL6Q9Y581 213 aa5.43□□□□□ -1.54
CLK3-219ENST00000567805 PCDHA2Q9Y5H9 948 aa5.43□□□□□ -1.54
CLK3-219ENST00000567805 SQORQ9Y6N5 450 aa5.43□□□□□ -1.54
CLK3-219ENST00000567805 TTC3P53804 2025 aa5.43□□□□□ -1.54
CLK3-219ENST00000567805 STK36Q9NRP7 1315 aa5.43□□□□□ -1.54
CLK3-219ENST00000567805 COL1A2P08123 1366 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms