RNA–Protein interactions for RNA: ENST00000567638.1

SCAMP2-209, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 678 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-209ENST00000567638 PCDHA2Q9Y5H9 948 aa17.13■□□□□ 0.33
SCAMP2-209ENST00000567638 M0QZ92 97 aa17.12■□□□□ 0.33
SCAMP2-209ENST00000567638 DHX15O43143 795 aaKnown RBP17.12■□□□□ 0.33
SCAMP2-209ENST00000567638 GNA11P29992 359 aa17.12■□□□□ 0.33
SCAMP2-209ENST00000567638 EVCP57679 992 aa17.12■□□□□ 0.33
SCAMP2-209ENST00000567638 SETQ01105 290 aaPredicted RBP17.12■□□□□ 0.33
SCAMP2-209ENST00000567638 AKAP17AQ02040 695 aaKnown RBP17.12■□□□□ 0.33
SCAMP2-209ENST00000567638 NTRK3Q16288 839 aa17.12■□□□□ 0.33
SCAMP2-209ENST00000567638 IER5Q5VY09 327 aa17.12■□□□□ 0.33
SCAMP2-209ENST00000567638 FAM160B1Q5W0V3 765 aa17.12■□□□□ 0.33
SCAMP2-209ENST00000567638 ABHD15Q6UXT9 468 aa17.12■□□□□ 0.33
SCAMP2-209ENST00000567638 IL17RAQ96F46 866 aa17.12■□□□□ 0.33
SCAMP2-209ENST00000567638 NECAB3Q96P71 396 aaPredicted RBP17.12■□□□□ 0.33
SCAMP2-209ENST00000567638 AGO3Q9H9G7 860 aaKnown RBP17.12■□□□□ 0.33
SCAMP2-209ENST00000567638 TRPV2Q9Y5S1 764 aa17.12■□□□□ 0.33
SCAMP2-209ENST00000567638 SQORQ9Y6N5 450 aa17.12■□□□□ 0.33
SCAMP2-209ENST00000567638 IPO5O00410 1097 aaKnown RBP17.11■□□□□ 0.33
SCAMP2-209ENST00000567638 ENPP3O14638 875 aa17.11■□□□□ 0.33
SCAMP2-209ENST00000567638 BACH1O14867 736 aa17.11■□□□□ 0.33
SCAMP2-209ENST00000567638 EPB41L2O43491 1005 aaKnown RBP17.11■□□□□ 0.33
SCAMP2-209ENST00000567638 IFNAR1P17181 557 aa17.11■□□□□ 0.33
SCAMP2-209ENST00000567638 MTHFD1LQ6UB35 978 aa17.11■□□□□ 0.33
SCAMP2-209ENST00000567638 CCDC60Q8IWA6 550 aaPredicted RBP17.11■□□□□ 0.33
SCAMP2-209ENST00000567638 TMEM192Q8IY95 271 aa17.11■□□□□ 0.33
SCAMP2-209ENST00000567638 CCDC148Q8NFR7 591 aa17.11■□□□□ 0.33
SCAMP2-209ENST00000567638 ATP8B4Q8TF62 1192 aa17.11■□□□□ 0.33
SCAMP2-209ENST00000567638 MRPL38Q96DV4 380 aaKnown RBP17.11■□□□□ 0.33
SCAMP2-209ENST00000567638 ZNF577Q9BSK1 485 aa17.11■□□□□ 0.33
SCAMP2-209ENST00000567638 RC3H2Q9HBD1 1191 aaKnown RBP17.11■□□□□ 0.33
SCAMP2-209ENST00000567638 ADGRA3Q8IWK6 1321 aa17.11■□□□□ 0.33
SCAMP2-209ENST00000567638 COL1A2P08123 1366 aa17.11■□□□□ 0.33
SCAMP2-209ENST00000567638 MUC3AQ02505 3323 aa17.1■□□□□ 0.33
SCAMP2-209ENST00000567638 SMIM35A0A1B0GVV1 85 aa17.1■□□□□ 0.33
SCAMP2-209ENST00000567638 H3BNC9 293 aa17.1■□□□□ 0.33
SCAMP2-209ENST00000567638 HBP1O60381 514 aa17.1■□□□□ 0.33
SCAMP2-209ENST00000567638 PPFIA3O75145 1194 aa17.1■□□□□ 0.33
SCAMP2-209ENST00000567638 PDIA3P30101 505 aaKnown RBP17.1■□□□□ 0.33
SCAMP2-209ENST00000567638 CD52P31358 61 aa17.1■□□□□ 0.33
SCAMP2-209ENST00000567638 CCT2P78371 535 aaKnown RBP17.1■□□□□ 0.33
SCAMP2-209ENST00000567638 TMEM62Q0P6H9 643 aa17.1■□□□□ 0.33
SCAMP2-209ENST00000567638 GPM6BQ13491 265 aa17.1■□□□□ 0.33
SCAMP2-209ENST00000567638 PTPROQ16827 1216 aa17.1■□□□□ 0.33
SCAMP2-209ENST00000567638 MIS18BP1Q6P0N0 1132 aa17.1■□□□□ 0.33
SCAMP2-209ENST00000567638 RUFY3Q7L099 469 aa17.1■□□□□ 0.33
SCAMP2-209ENST00000567638 FIBCD1Q8N539 461 aa17.1■□□□□ 0.33
SCAMP2-209ENST00000567638 BICD2Q8TD16 824 aa17.1■□□□□ 0.33
SCAMP2-209ENST00000567638 LINC01599Q8WXQ3 324 aa17.1■□□□□ 0.33
SCAMP2-209ENST00000567638 SLC26A6Q9BXS9 759 aa17.1■□□□□ 0.33
SCAMP2-209ENST00000567638 NCOA5Q9HCD5 579 aaKnown RBP17.1■□□□□ 0.33
SCAMP2-209ENST00000567638 ZNF302Q9NR11 478 aa17.1■□□□□ 0.33
SCAMP2-209ENST00000567638 TBC1D22BQ9NU19 505 aa17.1■□□□□ 0.33
SCAMP2-209ENST00000567638 IGSF9BQ9UPX0 1349 aa17.1■□□□□ 0.33
SCAMP2-209ENST00000567638 KDM3AQ9Y4C1 1321 aa17.1■□□□□ 0.33
SCAMP2-209ENST00000567638 FNDC1Q4ZHG4 1894 aaPredicted RBP17.1■□□□□ 0.33
SCAMP2-209ENST00000567638 XIRP2A4UGR9 3374 aa17.09■□□□□ 0.33
SCAMP2-209ENST00000567638 KLRC1P26715 233 aa17.09■□□□□ 0.33
SCAMP2-209ENST00000567638 CIITAP33076 1130 aa17.09■□□□□ 0.33
SCAMP2-209ENST00000567638 TOB2Q14106 344 aaPredicted RBP17.09■□□□□ 0.33
SCAMP2-209ENST00000567638 ZNF746Q6NUN9 644 aaPredicted RBP17.09■□□□□ 0.33
SCAMP2-209ENST00000567638 PDXDC2PQ6P474 469 aa17.09■□□□□ 0.33
SCAMP2-209ENST00000567638 NME8Q8N427 588 aa17.09■□□□□ 0.33
SCAMP2-209ENST00000567638 RASGRP4Q8TDF6 673 aa17.09■□□□□ 0.33
SCAMP2-209ENST00000567638 UIMC1Q96RL1 719 aa17.09■□□□□ 0.33
SCAMP2-209ENST00000567638 FTHL17Q9BXU8 183 aa17.09■□□□□ 0.33
SCAMP2-209ENST00000567638 CELF4Q9BZC1 486 aaKnown RBP17.09■□□□□ 0.33
SCAMP2-209ENST00000567638 UBE2ZQ9H832 354 aaPredicted RBP17.09■□□□□ 0.33
SCAMP2-209ENST00000567638 ZSWIM6Q9HCJ5 1215 aa17.09■□□□□ 0.33
SCAMP2-209ENST00000567638 VPS54Q9P1Q0 977 aa17.09■□□□□ 0.33
SCAMP2-209ENST00000567638 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.08■□□□□ 0.32
SCAMP2-209ENST00000567638 LINC00271P0C7V0 271 aa17.08■□□□□ 0.32
SCAMP2-209ENST00000567638 ATP4AP20648 1035 aa17.08■□□□□ 0.32
SCAMP2-209ENST00000567638 CTNNB1P35222 781 aa17.08■□□□□ 0.32
SCAMP2-209ENST00000567638 KRT76Q01546 638 aa17.08■□□□□ 0.32
SCAMP2-209ENST00000567638 PAK2Q13177 524 aa17.08■□□□□ 0.32
SCAMP2-209ENST00000567638 TIGD5Q53EQ6 642 aa17.08■□□□□ 0.32
SCAMP2-209ENST00000567638 PRR16Q569H4 304 aa17.08■□□□□ 0.32
SCAMP2-209ENST00000567638 ZNF484Q5JVG2 852 aa17.08■□□□□ 0.32
SCAMP2-209ENST00000567638 SWSAP1Q6NVH7 229 aa17.08■□□□□ 0.32
SCAMP2-209ENST00000567638 SMAP1Q8IYB5 467 aaPredicted RBP17.08■□□□□ 0.32
SCAMP2-209ENST00000567638 ZNF689Q96CS4 500 aaPredicted RBP17.08■□□□□ 0.32
SCAMP2-209ENST00000567638 TCEAL9Q9UHQ7 104 aa17.08■□□□□ 0.32
SCAMP2-209ENST00000567638 PADI3Q9ULW8 664 aa17.08■□□□□ 0.32
SCAMP2-209ENST00000567638 RWDD3Q9Y3V2 267 aa17.08■□□□□ 0.32
SCAMP2-209ENST00000567638 ZBTB42B2RXF5 422 aa17.07■□□□□ 0.32
SCAMP2-209ENST00000567638 C5orf67F2Z3F1 127 aa17.07■□□□□ 0.32
SCAMP2-209ENST00000567638 DGKIO75912 1065 aa17.07■□□□□ 0.32
SCAMP2-209ENST00000567638 RTN4RL1Q86UN2 441 aaPredicted RBP17.07■□□□□ 0.32
SCAMP2-209ENST00000567638 BBXQ8WY36 941 aaPredicted RBP17.07■□□□□ 0.32
SCAMP2-209ENST00000567638 LENG9Q96B70 501 aa17.07■□□□□ 0.32
SCAMP2-209ENST00000567638 SH3GLB2Q9NR46 395 aa17.07■□□□□ 0.32
SCAMP2-209ENST00000567638 MAFBQ9Y5Q3 323 aaPredicted RBP17.07■□□□□ 0.32
SCAMP2-209ENST00000567638 CYP46A1Q9Y6A2 500 aa17.07■□□□□ 0.32
SCAMP2-209ENST00000567638 PLXNA4Q9HCM2 1894 aa17.07■□□□□ 0.32
SCAMP2-209ENST00000567638 RB1P06400 928 aa17.06■□□□□ 0.32
SCAMP2-209ENST00000567638 PSAPP07602 524 aa17.06■□□□□ 0.32
SCAMP2-209ENST00000567638 BMPR1AP36894 532 aa17.06■□□□□ 0.32
SCAMP2-209ENST00000567638 BTG3Q14201 252 aaPredicted RBP17.06■□□□□ 0.32
SCAMP2-209ENST00000567638 NPAS4Q8IUM7 802 aa17.06■□□□□ 0.32
SCAMP2-209ENST00000567638 CKAP2LQ8IYA6 745 aa17.06■□□□□ 0.32
SCAMP2-209ENST00000567638 TRIM22Q8IYM9 498 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms