RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 GPR85P60893 370 aa4□□□□□ -1.77
HERPUD1-211ENST00000566550 ERVK-24P63145 666 aa4□□□□□ -1.77
HERPUD1-211ENST00000566550 KIF23Q02241 960 aaPredicted RBP4□□□□□ -1.77
HERPUD1-211ENST00000566550 PAK1Q13153 545 aa4□□□□□ -1.77
HERPUD1-211ENST00000566550 SNW1Q13573 536 aaKnown RBP4□□□□□ -1.77
HERPUD1-211ENST00000566550 FAM47CQ5HY64 1035 aa4□□□□□ -1.77
HERPUD1-211ENST00000566550 HYIQ5T013 277 aa4□□□□□ -1.77
HERPUD1-211ENST00000566550 PPP4R3AQ6IN85 833 aa4□□□□□ -1.77
HERPUD1-211ENST00000566550 OGFOD3Q6PK18 319 aa4□□□□□ -1.77
HERPUD1-211ENST00000566550 ZNF574Q6ZN55 896 aaPredicted RBP4□□□□□ -1.77
HERPUD1-211ENST00000566550 FAM43BQ6ZT52 329 aaPredicted RBP4□□□□□ -1.77
HERPUD1-211ENST00000566550 OVCH2Q7RTZ1 564 aa4□□□□□ -1.77
HERPUD1-211ENST00000566550 SPRED2Q7Z698 418 aa4□□□□□ -1.77
HERPUD1-211ENST00000566550 SRGAP1Q7Z6B7 1085 aa4□□□□□ -1.77
HERPUD1-211ENST00000566550 LRRC56Q8IYG6 542 aaPredicted RBP4□□□□□ -1.77
HERPUD1-211ENST00000566550 CNPY4Q8N129 248 aa4□□□□□ -1.77
HERPUD1-211ENST00000566550 DIS3LQ8TF46 1054 aaKnown RBP4□□□□□ -1.77
HERPUD1-211ENST00000566550 JADE3Q92613 823 aa4□□□□□ -1.77
HERPUD1-211ENST00000566550 GATA6Q92908 595 aa4□□□□□ -1.77
HERPUD1-211ENST00000566550 ERP27Q96DN0 273 aa4□□□□□ -1.77
HERPUD1-211ENST00000566550 TMEM169Q96HH4 297 aa4□□□□□ -1.77
HERPUD1-211ENST00000566550 RIPOR3Q96MK2 946 aa4□□□□□ -1.77
HERPUD1-211ENST00000566550 CELF4Q9BZC1 486 aaKnown RBP4□□□□□ -1.77
HERPUD1-211ENST00000566550 MYLK2Q9H1R3 596 aa4□□□□□ -1.77
HERPUD1-211ENST00000566550 CERS4Q9HA82 394 aa4□□□□□ -1.77
HERPUD1-211ENST00000566550 GPRC5CQ9NQ84 441 aa4□□□□□ -1.77
HERPUD1-211ENST00000566550 DISC1Q9NRI5 854 aa4□□□□□ -1.77
HERPUD1-211ENST00000566550 TOMM22Q9NS69 142 aa4□□□□□ -1.77
HERPUD1-211ENST00000566550 DNAJC28Q9NX36 388 aa4□□□□□ -1.77
HERPUD1-211ENST00000566550 GPRC5BQ9NZH0 403 aa4□□□□□ -1.77
HERPUD1-211ENST00000566550 POLG2Q9UHN1 485 aa4□□□□□ -1.77
HERPUD1-211ENST00000566550 VAV3Q9UKW4 847 aa4□□□□□ -1.77
HERPUD1-211ENST00000566550 CORO2BQ9UQ03 480 aa4□□□□□ -1.77
HERPUD1-211ENST00000566550 PCDHGC5Q9Y5F6 944 aa4□□□□□ -1.77
HERPUD1-211ENST00000566550 PCDHA11Q9Y5I1 949 aa4□□□□□ -1.77
HERPUD1-211ENST00000566550 FHOD1Q9Y613 1164 aa4□□□□□ -1.77
HERPUD1-211ENST00000566550 RASA4BC9J798 803 aa3.99□□□□□ -1.77
HERPUD1-211ENST00000566550 H0Y8X5 98 aa3.99□□□□□ -1.77
HERPUD1-211ENST00000566550 H7C1D1 291 aa3.99□□□□□ -1.77
HERPUD1-211ENST00000566550 KCNK3O14649 394 aa3.99□□□□□ -1.77
HERPUD1-211ENST00000566550 KPNA5O15131 536 aa3.99□□□□□ -1.77
HERPUD1-211ENST00000566550 TMPRSS2O15393 492 aa3.99□□□□□ -1.77
HERPUD1-211ENST00000566550 RASA4O43374 803 aa3.99□□□□□ -1.77
HERPUD1-211ENST00000566550 TGM5O43548 720 aa3.99□□□□□ -1.77
HERPUD1-211ENST00000566550 KDM1AO60341 852 aa3.99□□□□□ -1.77
HERPUD1-211ENST00000566550 MSCO60682 206 aa3.99□□□□□ -1.77
HERPUD1-211ENST00000566550 TSPAN15O95858 294 aa3.99□□□□□ -1.77
HERPUD1-211ENST00000566550 CKMP06732 381 aa3.99□□□□□ -1.77
HERPUD1-211ENST00000566550 CD3EP07766 207 aa3.99□□□□□ -1.77
HERPUD1-211ENST00000566550 RNASE1P07998 156 aaKnown RBP3.99□□□□□ -1.77
HERPUD1-211ENST00000566550 ZSCAN22P10073 491 aaPredicted RBP3.99□□□□□ -1.77
HERPUD1-211ENST00000566550 KRT15P19012 456 aa3.99□□□□□ -1.77
HERPUD1-211ENST00000566550 SLC9A1P19634 815 aa3.99□□□□□ -1.77
HERPUD1-211ENST00000566550 ITIH2P19823 946 aa3.99□□□□□ -1.77
HERPUD1-211ENST00000566550 AKAP5P24588 427 aa3.99□□□□□ -1.77
HERPUD1-211ENST00000566550 CFPP27918 469 aa3.99□□□□□ -1.77
HERPUD1-211ENST00000566550 PEX2P28328 305 aa3.99□□□□□ -1.77
HERPUD1-211ENST00000566550 GRK6P43250 576 aa3.99□□□□□ -1.77
HERPUD1-211ENST00000566550 GPR3P46089 330 aa3.99□□□□□ -1.77
HERPUD1-211ENST00000566550 FAM193AP78312 1265 aa3.99□□□□□ -1.77
HERPUD1-211ENST00000566550 KRT85P78386 507 aa3.99□□□□□ -1.77
HERPUD1-211ENST00000566550 SRSF2Q01130 221 aaKnown RBP3.99□□□□□ -1.77
HERPUD1-211ENST00000566550 TNFAIP2Q03169 654 aa3.99□□□□□ -1.77
HERPUD1-211ENST00000566550 RING1Q06587 406 aa3.99□□□□□ -1.77
HERPUD1-211ENST00000566550 MESP2Q0VG99 397 aa3.99□□□□□ -1.77
HERPUD1-211ENST00000566550 TTLL4Q14679 1199 aa3.99□□□□□ -1.77
HERPUD1-211ENST00000566550 MLANAQ16655 118 aa3.99□□□□□ -1.77
HERPUD1-211ENST00000566550 ANO4Q32M45 955 aa3.99□□□□□ -1.77
HERPUD1-211ENST00000566550 CCDC184Q52MB2 194 aa3.99□□□□□ -1.77
HERPUD1-211ENST00000566550 ANKRD39Q53RE8 183 aa3.99□□□□□ -1.77
HERPUD1-211ENST00000566550 FAM180BQ6P0A1 224 aa3.99□□□□□ -1.77
HERPUD1-211ENST00000566550 MZT2AQ6P582 158 aa3.99□□□□□ -1.77
HERPUD1-211ENST00000566550 DARS2Q6PI48 645 aaKnown RBP3.99□□□□□ -1.77
HERPUD1-211ENST00000566550 ARHGAP27Q6ZUM4 889 aa3.99□□□□□ -1.77
HERPUD1-211ENST00000566550 OTOP3Q7RTS5 596 aa3.99□□□□□ -1.77
HERPUD1-211ENST00000566550 DYMQ7RTS9 669 aa3.99□□□□□ -1.77
HERPUD1-211ENST00000566550 EFHBQ8N7U6 833 aa3.99□□□□□ -1.77
HERPUD1-211ENST00000566550 PPM1NQ8N819 430 aa3.99□□□□□ -1.77
HERPUD1-211ENST00000566550 PCDH19Q8TAB3 1148 aa3.99□□□□□ -1.77
HERPUD1-211ENST00000566550 DEPTORQ8TB45 409 aa3.99□□□□□ -1.77
HERPUD1-211ENST00000566550 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.99□□□□□ -1.77
HERPUD1-211ENST00000566550 NETO1Q8TDF5 533 aa3.99□□□□□ -1.77
HERPUD1-211ENST00000566550 NSUN6Q8TEA1 469 aaKnown RBP3.99□□□□□ -1.77
HERPUD1-211ENST00000566550 HPS3Q969F9 1004 aa3.99□□□□□ -1.77
HERPUD1-211ENST00000566550 KIAA1191Q96A73 305 aa3.99□□□□□ -1.77
HERPUD1-211ENST00000566550 KREMEN1Q96MU8 473 aa3.99□□□□□ -1.77
HERPUD1-211ENST00000566550 SLC2A13Q96QE2 648 aa3.99□□□□□ -1.77
HERPUD1-211ENST00000566550 CENPOQ9BU64 300 aa3.99□□□□□ -1.77
HERPUD1-211ENST00000566550 B3GNT5Q9BYG0 378 aa3.99□□□□□ -1.77
HERPUD1-211ENST00000566550 WDR12Q9GZL7 423 aaKnown RBP3.99□□□□□ -1.77
HERPUD1-211ENST00000566550 QRSL1Q9H0R6 528 aaKnown RBP3.99□□□□□ -1.77
HERPUD1-211ENST00000566550 BHMT2Q9H2M3 363 aa3.99□□□□□ -1.77
HERPUD1-211ENST00000566550 CATSPERZQ9NTU4 200 aa3.99□□□□□ -1.77
HERPUD1-211ENST00000566550 ASAP1Q9ULH1 1129 aa3.99□□□□□ -1.77
HERPUD1-211ENST00000566550 PPP1R9AQ9ULJ8 1098 aa3.99□□□□□ -1.77
HERPUD1-211ENST00000566550 MINPP1Q9UNW1 487 aa3.99□□□□□ -1.77
HERPUD1-211ENST00000566550 SF3B6Q9Y3B4 125 aaKnown RBP3.99□□□□□ -1.77
HERPUD1-211ENST00000566550 FAM227AF5H4B4 570 aa3.98□□□□□ -1.77
HERPUD1-211ENST00000566550 J3KRW8 73 aa3.98□□□□□ -1.77
HERPUD1-211ENST00000566550 M0R3H8 397 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms