RNA–Protein interactions for RNA: ENST00000566126.5

CLK3-217, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-217ENST00000566126 CYP26B1Q9NR63 512 aa19.34■□□□□ 0.69
CLK3-217ENST00000566126 TOMM22Q9NS69 142 aa19.34■□□□□ 0.69
CLK3-217ENST00000566126 LRFN2Q9ULH4 789 aa19.34■□□□□ 0.69
CLK3-217ENST00000566126 PADI3Q9ULW8 664 aa19.34■□□□□ 0.69
CLK3-217ENST00000566126 DUSP12Q9UNI6 340 aa19.34■□□□□ 0.69
CLK3-217ENST00000566126 CACNA1IQ9P0X4 2223 aa19.34■□□□□ 0.69
CLK3-217ENST00000566126 TBKBP1A7MCY6 615 aa19.33■□□□□ 0.68
CLK3-217ENST00000566126 EOMESO95936 686 aa19.33■□□□□ 0.68
CLK3-217ENST00000566126 ADRB1P08588 477 aa19.33■□□□□ 0.68
CLK3-217ENST00000566126 SP9P0CG40 484 aa19.33■□□□□ 0.68
CLK3-217ENST00000566126 PLCB3Q01970 1234 aa19.33■□□□□ 0.68
CLK3-217ENST00000566126 TDGQ13569 410 aa19.33■□□□□ 0.68
CLK3-217ENST00000566126 KIAA1841Q6NSI8 718 aa19.33■□□□□ 0.68
CLK3-217ENST00000566126 KANK3Q6NY19 840 aa19.33■□□□□ 0.68
CLK3-217ENST00000566126 ZC3H14Q6PJT7 736 aaKnown RBP19.33■□□□□ 0.68
CLK3-217ENST00000566126 TTC14Q96N46 770 aa19.33■□□□□ 0.68
CLK3-217ENST00000566126 LRRCC1Q9C099 1032 aa19.33■□□□□ 0.68
CLK3-217ENST00000566126 CWH43Q9H720 699 aa19.33■□□□□ 0.68
CLK3-217ENST00000566126 NGRNQ9NPE2 291 aaKnown RBP19.33■□□□□ 0.68
CLK3-217ENST00000566126 TYW1Q9NV66 732 aaKnown RBP19.33■□□□□ 0.68
CLK3-217ENST00000566126 RNF216Q9NWF9 866 aaPredicted RBP19.33■□□□□ 0.68
CLK3-217ENST00000566126 FBXL21Q9UKT6 434 aa19.33■□□□□ 0.68
CLK3-217ENST00000566126 MBLAC1A4D2B0 266 aaPredicted RBP19.32■□□□□ 0.68
CLK3-217ENST00000566126 IBSPP21815 317 aaPredicted RBP19.32■□□□□ 0.68
CLK3-217ENST00000566126 SDHBP21912 280 aa19.32■□□□□ 0.68
CLK3-217ENST00000566126 SEMA3FQ13275 785 aa19.32■□□□□ 0.68
CLK3-217ENST00000566126 MARCH8Q5T0T0 291 aa19.32■□□□□ 0.68
CLK3-217ENST00000566126 RARS2Q5T160 578 aaKnown RBP19.32■□□□□ 0.68
CLK3-217ENST00000566126 FAM102BQ5T8I3 360 aa19.32■□□□□ 0.68
CLK3-217ENST00000566126 C12orf76Q8N812 135 aaPredicted RBP19.32■□□□□ 0.68
CLK3-217ENST00000566126 FEZF2Q8TBJ5 459 aa19.32■□□□□ 0.68
CLK3-217ENST00000566126 TUBE1Q9UJT0 475 aa19.32■□□□□ 0.68
CLK3-217ENST00000566126 DBR1Q9UK59 544 aaKnown RBP19.32■□□□□ 0.68
CLK3-217ENST00000566126 SQORQ9Y6N5 450 aa19.32■□□□□ 0.68
CLK3-217ENST00000566126 ANKRD11Q6UB99 2663 aaPredicted RBP19.31■□□□□ 0.68
CLK3-217ENST00000566126 CCND2P30279 289 aa19.31■□□□□ 0.68
CLK3-217ENST00000566126 HOXA13P31271 388 aaPredicted RBP19.31■□□□□ 0.68
CLK3-217ENST00000566126 SARSP49591 514 aaKnown RBP19.31■□□□□ 0.68
CLK3-217ENST00000566126 VPS53Q5VIR6 699 aa19.31■□□□□ 0.68
CLK3-217ENST00000566126 ZBTB10Q96DT7 871 aa19.31■□□□□ 0.68
CLK3-217ENST00000566126 FASNP49327 2511 aaKnown RBP19.3■□□□□ 0.68
CLK3-217ENST00000566126 DCDC2BA2VCK2 349 aa19.3■□□□□ 0.68
CLK3-217ENST00000566126 KRBA1A5PL33 1030 aa19.3■□□□□ 0.68
CLK3-217ENST00000566126 PPFIA1Q13136 1202 aa19.3■□□□□ 0.68
CLK3-217ENST00000566126 NEDD9Q14511 834 aa19.3■□□□□ 0.68
CLK3-217ENST00000566126 GRIK4Q16099 956 aa19.3■□□□□ 0.68
CLK3-217ENST00000566126 CHAMP1Q96JM3 812 aa19.3■□□□□ 0.68
CLK3-217ENST00000566126 JMJD4Q9H9V9 463 aa19.3■□□□□ 0.68
CLK3-217ENST00000566126 PUF60Q9UHX1 559 aaKnown RBP19.3■□□□□ 0.68
CLK3-217ENST00000566126 PCDHB7Q9Y5E2 793 aa19.3■□□□□ 0.68
CLK3-217ENST00000566126 IGSF9BQ9UPX0 1349 aa19.29■□□□□ 0.68
CLK3-217ENST00000566126 NARSO43776 548 aaKnown RBP19.29■□□□□ 0.68
CLK3-217ENST00000566126 MGEA5O60502 916 aa19.29■□□□□ 0.68
CLK3-217ENST00000566126 CLASP2O75122 1294 aaKnown RBP19.29■□□□□ 0.68
CLK3-217ENST00000566126 PAK2Q13177 524 aa19.29■□□□□ 0.68
CLK3-217ENST00000566126 ATAT1Q5SQI0 421 aa19.29■□□□□ 0.68
CLK3-217ENST00000566126 KCNK12Q9HB15 430 aa19.29■□□□□ 0.68
CLK3-217ENST00000566126 MAP3K20Q9NYL2 800 aaKnown RBP19.29■□□□□ 0.68
CLK3-217ENST00000566126 DLGAP2Q9P1A6 1054 aa19.29■□□□□ 0.68
CLK3-217ENST00000566126 C2orf71A6NGG8 1288 aa19.28■□□□□ 0.68
CLK3-217ENST00000566126 SPATA31C2B4DYI2 1134 aa19.28■□□□□ 0.68
CLK3-217ENST00000566126 STK25O00506 426 aa19.28■□□□□ 0.68
CLK3-217ENST00000566126 HOXB3P14651 431 aaPredicted RBP19.28■□□□□ 0.68
CLK3-217ENST00000566126 LAG3P18627 525 aa19.28■□□□□ 0.68
CLK3-217ENST00000566126 MRPS9P82933 396 aaKnown RBP19.28■□□□□ 0.68
CLK3-217ENST00000566126 SP4Q02446 784 aa19.28■□□□□ 0.68
CLK3-217ENST00000566126 TMEM62Q0P6H9 643 aa19.28■□□□□ 0.68
CLK3-217ENST00000566126 TMC7Q7Z402 723 aa19.28■□□□□ 0.68
CLK3-217ENST00000566126 MRPL43Q8N983 215 aaKnown RBP19.28■□□□□ 0.68
CLK3-217ENST00000566126 INPP4AQ96PE3 977 aaPredicted RBP19.28■□□□□ 0.68
CLK3-217ENST00000566126 FAM49AQ9H0Q0 323 aaPredicted RBP19.28■□□□□ 0.68
CLK3-217ENST00000566126 VAT1LQ9HCJ6 419 aa19.28■□□□□ 0.68
CLK3-217ENST00000566126 ZBTB40Q9NUA8 1239 aa19.28■□□□□ 0.68
CLK3-217ENST00000566126 TRPV2Q9Y5S1 764 aa19.28■□□□□ 0.68
CLK3-217ENST00000566126 ASPMQ8IZT6 3477 aa19.27■□□□□ 0.68
CLK3-217ENST00000566126 PPP1R11O60927 126 aaPredicted RBP19.27■□□□□ 0.68
CLK3-217ENST00000566126 TBC1D8BQ0IIM8 1120 aa19.27■□□□□ 0.68
CLK3-217ENST00000566126 SPECC1Q5M775 1068 aa19.27■□□□□ 0.68
CLK3-217ENST00000566126 VARS2Q5ST30 1063 aaKnown RBP19.27■□□□□ 0.68
CLK3-217ENST00000566126 IER5Q5VY09 327 aa19.27■□□□□ 0.68
CLK3-217ENST00000566126 RTKNQ9BST9 563 aa19.27■□□□□ 0.68
CLK3-217ENST00000566126 WNT16Q9UBV4 365 aa19.27■□□□□ 0.68
CLK3-217ENST00000566126 CDV3Q9UKY7 258 aaKnown RBP19.27■□□□□ 0.68
CLK3-217ENST00000566126 C2orf16Q68DN1 1984 aa19.26■□□□□ 0.67
CLK3-217ENST00000566126 DCNP07585 359 aaKnown RBP19.26■□□□□ 0.67
CLK3-217ENST00000566126 CFHP08603 1231 aa19.26■□□□□ 0.67
CLK3-217ENST00000566126 PDE4AP27815 886 aa19.26■□□□□ 0.67
CLK3-217ENST00000566126 PBX3P40426 434 aa19.26■□□□□ 0.67
CLK3-217ENST00000566126 ALX1Q15699 326 aa19.26■□□□□ 0.67
CLK3-217ENST00000566126 TMEM266Q2M3C6 531 aa19.26■□□□□ 0.67
CLK3-217ENST00000566126 GNPTABQ3T906 1256 aa19.26■□□□□ 0.67
CLK3-217ENST00000566126 XRRA1Q6P2D8 792 aa19.26■□□□□ 0.67
CLK3-217ENST00000566126 C1orf210Q8IVY1 113 aa19.26■□□□□ 0.67
CLK3-217ENST00000566126 ACSF2Q96CM8 615 aaPredicted RBP19.26■□□□□ 0.67
CLK3-217ENST00000566126 AMNQ9BXJ7 453 aa19.26■□□□□ 0.67
CLK3-217ENST00000566126 TBC1D17Q9HA65 648 aa19.26■□□□□ 0.67
CLK3-217ENST00000566126 NCDNQ9UBB6 729 aa19.26■□□□□ 0.67
CLK3-217ENST00000566126 PCDHA1Q9Y5I3 950 aa19.26■□□□□ 0.67
CLK3-217ENST00000566126 POTEMA6NI47 508 aa19.25■□□□□ 0.67
CLK3-217ENST00000566126 PRR5-ARHGAP8B1AHC4 643 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms