RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 PSMC5P62195 406 aa23.68■■□□□ 1.38
SHCBP1-205ENST00000566016 MDM2Q00987 491 aaPredicted RBP23.68■■□□□ 1.38
SHCBP1-205ENST00000566016 PRKCEQ02156 737 aa23.68■■□□□ 1.38
SHCBP1-205ENST00000566016 EPHA7Q15375 998 aa23.68■■□□□ 1.38
SHCBP1-205ENST00000566016 UGCGQ16739 394 aa23.68■■□□□ 1.38
SHCBP1-205ENST00000566016 TRIM71Q2Q1W2 868 aaKnown RBP23.68■■□□□ 1.38
SHCBP1-205ENST00000566016 MARCH8Q5T0T0 291 aa23.68■■□□□ 1.38
SHCBP1-205ENST00000566016 CKAP2LQ8IYA6 745 aa23.68■■□□□ 1.38
SHCBP1-205ENST00000566016 TMEM199Q8N511 208 aa23.68■■□□□ 1.38
SHCBP1-205ENST00000566016 WNT8AQ9H1J5 351 aa23.68■■□□□ 1.38
SHCBP1-205ENST00000566016 CEP131Q9UPN4 1083 aa23.68■■□□□ 1.38
SHCBP1-205ENST00000566016 UMODL1Q5DID0 1318 aa23.67■■□□□ 1.38
SHCBP1-205ENST00000566016 DKC1O60832 514 aaKnown RBP eCLIP23.67■■□□□ 1.38
SHCBP1-205ENST00000566016 P4HBP07237 508 aaKnown RBP23.67■■□□□ 1.38
SHCBP1-205ENST00000566016 CYP2C18P33260 490 aa23.67■■□□□ 1.38
SHCBP1-205ENST00000566016 PRPHP41219 470 aa23.67■■□□□ 1.38
SHCBP1-205ENST00000566016 FPGSQ05932 587 aa23.67■■□□□ 1.38
SHCBP1-205ENST00000566016 PTGDRQ13258 359 aa23.67■■□□□ 1.38
SHCBP1-205ENST00000566016 BECN1Q14457 450 aa23.67■■□□□ 1.38
SHCBP1-205ENST00000566016 ZNF484Q5JVG2 852 aa23.67■■□□□ 1.38
SHCBP1-205ENST00000566016 NCAPH2Q6IBW4 605 aa23.67■■□□□ 1.38
SHCBP1-205ENST00000566016 RPAINQ86UA6 219 aa23.67■■□□□ 1.38
SHCBP1-205ENST00000566016 NEK9Q8TD19 979 aa23.67■■□□□ 1.38
SHCBP1-205ENST00000566016 ARID2Q68CP9 1835 aa23.67■■□□□ 1.38
SHCBP1-205ENST00000566016 ZBTB42B2RXF5 422 aa23.66■■□□□ 1.38
SHCBP1-205ENST00000566016 QARSP47897 775 aaKnown RBP23.66■■□□□ 1.38
SHCBP1-205ENST00000566016 FXR2P51116 673 aaKnown RBP eCLIP23.66■■□□□ 1.38
SHCBP1-205ENST00000566016 RESTQ13127 1097 aa23.66■■□□□ 1.38
SHCBP1-205ENST00000566016 CHRDL2Q6WN34 429 aa23.66■■□□□ 1.38
SHCBP1-205ENST00000566016 FERMT3Q86UX7 667 aa23.66■■□□□ 1.38
SHCBP1-205ENST00000566016 ZSCAN16Q9H4T2 348 aaPredicted RBP23.66■■□□□ 1.38
SHCBP1-205ENST00000566016 A0A1W2PPC1 479 aa23.65■■□□□ 1.38
SHCBP1-205ENST00000566016 PARNO95453 639 aaKnown RBP23.65■■□□□ 1.38
SHCBP1-205ENST00000566016 CKBP12277 381 aa23.65■■□□□ 1.38
SHCBP1-205ENST00000566016 RFC2P35250 354 aa23.65■■□□□ 1.38
SHCBP1-205ENST00000566016 PPIGQ13427 754 aaKnown RBP eCLIP23.65■■□□□ 1.38
SHCBP1-205ENST00000566016 XKR3Q5GH77 459 aa23.65■■□□□ 1.38
SHCBP1-205ENST00000566016 RETREG2Q8NC44 543 aa23.65■■□□□ 1.38
SHCBP1-205ENST00000566016 TET1Q8NFU7 2136 aa23.65■■□□□ 1.38
SHCBP1-205ENST00000566016 WNT8BQ93098 351 aa23.65■■□□□ 1.38
SHCBP1-205ENST00000566016 NRBP2Q9NSY0 501 aa23.65■■□□□ 1.38
SHCBP1-205ENST00000566016 SIP14410 1827 aa23.64■■□□□ 1.38
SHCBP1-205ENST00000566016 BMP15O95972 392 aa23.64■■□□□ 1.38
SHCBP1-205ENST00000566016 SELPP16109 830 aa23.64■■□□□ 1.38
SHCBP1-205ENST00000566016 ATP2C1P98194 919 aaPredicted RBP23.64■■□□□ 1.38
SHCBP1-205ENST00000566016 TMEM266Q2M3C6 531 aa23.64■■□□□ 1.38
SHCBP1-205ENST00000566016 BANK1Q8NDB2 785 aa23.64■■□□□ 1.38
SHCBP1-205ENST00000566016 HSD17B14Q9BPX1 270 aa23.64■■□□□ 1.38
SHCBP1-205ENST00000566016 PCDH10Q9P2E7 1040 aa23.64■■□□□ 1.38
SHCBP1-205ENST00000566016 PCDHA2Q9Y5H9 948 aa23.64■■□□□ 1.38
SHCBP1-205ENST00000566016 LAMA2P24043 3122 aaKnown RBP23.64■■□□□ 1.37
SHCBP1-205ENST00000566016 LOXHD1Q8IVV2 1947 aa23.63■■□□□ 1.37
SHCBP1-205ENST00000566016 POTEMA6NI47 508 aa23.63■■□□□ 1.37
SHCBP1-205ENST00000566016 IQCF3P0C7M6 154 aa23.63■■□□□ 1.37
SHCBP1-205ENST00000566016 CSF2RAP15509 400 aa23.63■■□□□ 1.37
SHCBP1-205ENST00000566016 IGBP1P78318 339 aa23.63■■□□□ 1.37
SHCBP1-205ENST00000566016 LRRC8DQ7L1W4 858 aa23.63■■□□□ 1.37
SHCBP1-205ENST00000566016 C4orf19Q8IY42 314 aa23.63■■□□□ 1.37
SHCBP1-205ENST00000566016 EIF2AK1Q9BQI3 630 aaKnown RBP23.63■■□□□ 1.37
SHCBP1-205ENST00000566016 LXNQ9BS40 222 aa23.63■■□□□ 1.37
SHCBP1-205ENST00000566016 NIFKQ9BYG3 293 aaKnown RBP23.63■■□□□ 1.37
SHCBP1-205ENST00000566016 RAB34Q9BZG1 259 aa23.63■■□□□ 1.37
SHCBP1-205ENST00000566016 UBE2OQ9C0C9 1292 aaKnown RBP23.63■■□□□ 1.37
SHCBP1-205ENST00000566016 STBD1O95210 358 aa23.62■■□□□ 1.37
SHCBP1-205ENST00000566016 LYPLA2O95372 231 aa23.62■■□□□ 1.37
SHCBP1-205ENST00000566016 PFKMP08237 780 aa23.62■■□□□ 1.37
SHCBP1-205ENST00000566016 CCL23P55773 120 aa23.62■■□□□ 1.37
SHCBP1-205ENST00000566016 PDIA5Q14554 519 aa23.62■■□□□ 1.37
SHCBP1-205ENST00000566016 ARL6IP4Q66PJ3 421 aaKnown RBP23.62■■□□□ 1.37
SHCBP1-205ENST00000566016 MTHFD1LQ6UB35 978 aa23.62■■□□□ 1.37
SHCBP1-205ENST00000566016 TRAPPC12Q8WVT3 735 aa23.62■■□□□ 1.37
SHCBP1-205ENST00000566016 ZSWIM4Q9H7M6 989 aa23.62■■□□□ 1.37
SHCBP1-205ENST00000566016 SMIM35A0A1B0GVV1 85 aa23.62■■□□□ 1.37
SHCBP1-205ENST00000566016 C22orf31O95567 290 aa23.62■■□□□ 1.37
SHCBP1-205ENST00000566016 THPOP40225 353 aa23.62■■□□□ 1.37
SHCBP1-205ENST00000566016 TECP42680 631 aa23.62■■□□□ 1.37
SHCBP1-205ENST00000566016 TARBP2Q15633 366 aaKnown RBP23.62■■□□□ 1.37
SHCBP1-205ENST00000566016 TRAF7Q6Q0C0 670 aa23.62■■□□□ 1.37
SHCBP1-205ENST00000566016 RUFY4Q6ZNE9 571 aa23.62■■□□□ 1.37
SHCBP1-205ENST00000566016 RSPH3Q86UC2 560 aa23.62■■□□□ 1.37
SHCBP1-205ENST00000566016 IGSF22Q8N9C0 903 aa23.62■■□□□ 1.37
SHCBP1-205ENST00000566016 RGL1Q9NZL6 768 aa23.62■■□□□ 1.37
SHCBP1-205ENST00000566016 WRAP73Q9P2S5 460 aaPredicted RBP23.62■■□□□ 1.37
SHCBP1-205ENST00000566016 COLQQ9Y215 455 aaPredicted RBP23.62■■□□□ 1.37
SHCBP1-205ENST00000566016 PPME1Q9Y570 386 aa23.62■■□□□ 1.37
SHCBP1-205ENST00000566016 MAGEB2O15479 319 aa23.61■■□□□ 1.37
SHCBP1-205ENST00000566016 SLITRK3O94933 977 aa23.61■■□□□ 1.37
SHCBP1-205ENST00000566016 KLRC1P26715 233 aa23.61■■□□□ 1.37
SHCBP1-205ENST00000566016 ZNF618Q5T7W0 954 aa23.61■■□□□ 1.37
SHCBP1-205ENST00000566016 ANO5Q75V66 913 aa23.61■■□□□ 1.37
SHCBP1-205ENST00000566016 ERMNQ8TAM6 284 aa23.61■■□□□ 1.37
SHCBP1-205ENST00000566016 SCLYQ96I15 445 aa23.61■■□□□ 1.37
SHCBP1-205ENST00000566016 DYDC2Q96IM9 177 aa23.61■■□□□ 1.37
SHCBP1-205ENST00000566016 TUFT1Q9NNX1 390 aa23.61■■□□□ 1.37
SHCBP1-205ENST00000566016 IL23AQ9NPF7 189 aa23.61■■□□□ 1.37
SHCBP1-205ENST00000566016 SEPT9Q9UHD8 586 aaPredicted RBP23.61■■□□□ 1.37
SHCBP1-205ENST00000566016 STK24Q9Y6E0 443 aa23.61■■□□□ 1.37
SHCBP1-205ENST00000566016 CYP4A11Q02928 519 aa23.6■■□□□ 1.37
SHCBP1-205ENST00000566016 FAM26DQ5JW98 314 aa23.6■■□□□ 1.37
SHCBP1-205ENST00000566016 HAUS3Q68CZ6 603 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms