RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 MED24O75448 989 aa14.14□□□□□ -0.15
SF3B3-206ENST00000565990 LETM1O95202 739 aaPredicted RBP14.14□□□□□ -0.15
SF3B3-206ENST00000565990 MYL3P08590 195 aa14.14□□□□□ -0.15
SF3B3-206ENST00000565990 CDC25AP30304 524 aa14.14□□□□□ -0.15
SF3B3-206ENST00000565990 CDK7P50613 346 aa14.14□□□□□ -0.15
SF3B3-206ENST00000565990 UGCGQ16739 394 aa14.14□□□□□ -0.15
SF3B3-206ENST00000565990 UTP14CQ5TAP6 766 aaKnown RBP14.14□□□□□ -0.15
SF3B3-206ENST00000565990 KRT79Q5XKE5 535 aa14.14□□□□□ -0.15
SF3B3-206ENST00000565990 SESTD1Q86VW0 696 aa14.14□□□□□ -0.15
SF3B3-206ENST00000565990 GLG1Q92896 1179 aa14.14□□□□□ -0.15
SF3B3-206ENST00000565990 ATP6V0A1Q93050 837 aa14.14□□□□□ -0.15
SF3B3-206ENST00000565990 DYDC2Q96IM9 177 aa14.14□□□□□ -0.15
SF3B3-206ENST00000565990 PDLIM2Q96JY6 352 aa14.14□□□□□ -0.15
SF3B3-206ENST00000565990 GLT1D1Q96MS3 346 aa14.14□□□□□ -0.15
SF3B3-206ENST00000565990 KATNAL1Q9BW62 490 aa14.14□□□□□ -0.15
SF3B3-206ENST00000565990 ZSWIM4Q9H7M6 989 aa14.14□□□□□ -0.15
SF3B3-206ENST00000565990 WRAP73Q9P2S5 460 aaPredicted RBP14.14□□□□□ -0.15
SF3B3-206ENST00000565990 TRIP12Q14669 1992 aaPredicted RBP14.13□□□□□ -0.15
SF3B3-206ENST00000565990 PP2D1A8MPX8 630 aa14.13□□□□□ -0.15
SF3B3-206ENST00000565990 BACH1O14867 736 aa14.13□□□□□ -0.15
SF3B3-206ENST00000565990 CMA1P23946 247 aa14.13□□□□□ -0.15
SF3B3-206ENST00000565990 HOXC8P31273 242 aa14.13□□□□□ -0.15
SF3B3-206ENST00000565990 PSEN2P49810 448 aa14.13□□□□□ -0.15
SF3B3-206ENST00000565990 TERF1P54274 439 aa14.13□□□□□ -0.15
SF3B3-206ENST00000565990 PTPN11Q06124 597 aaPredicted RBP14.13□□□□□ -0.15
SF3B3-206ENST00000565990 CTTNQ14247 550 aaKnown RBP14.13□□□□□ -0.15
SF3B3-206ENST00000565990 MFSD10Q14728 455 aa14.13□□□□□ -0.15
SF3B3-206ENST00000565990 PLCB4Q15147 1175 aa14.13□□□□□ -0.15
SF3B3-206ENST00000565990 ECM1Q16610 540 aa14.13□□□□□ -0.15
SF3B3-206ENST00000565990 NFRKBQ6P4R8 1299 aa14.13□□□□□ -0.15
SF3B3-206ENST00000565990 SHC4Q6S5L8 630 aa14.13□□□□□ -0.15
SF3B3-206ENST00000565990 USP49Q70CQ1 688 aa14.13□□□□□ -0.15
SF3B3-206ENST00000565990 TRIM50Q86XT4 487 aa14.13□□□□□ -0.15
SF3B3-206ENST00000565990 BBXQ8WY36 941 aaPredicted RBP14.13□□□□□ -0.15
SF3B3-206ENST00000565990 EPSTI1Q96J88 318 aa14.13□□□□□ -0.15
SF3B3-206ENST00000565990 CEP89Q96ST8 783 aa14.13□□□□□ -0.15
SF3B3-206ENST00000565990 NRBP2Q9NSY0 501 aa14.13□□□□□ -0.15
SF3B3-206ENST00000565990 ZNF215Q9UL58 517 aaPredicted RBP14.13□□□□□ -0.15
SF3B3-206ENST00000565990 LOXHD1Q8IVV2 1947 aa14.13□□□□□ -0.15
SF3B3-206ENST00000565990 FAM237AA0A1B0GTK4 181 aa14.12□□□□□ -0.15
SF3B3-206ENST00000565990 A0A1W2PQ27 194 aa14.12□□□□□ -0.15
SF3B3-206ENST00000565990 A0A1W2PQ64 194 aa14.12□□□□□ -0.15
SF3B3-206ENST00000565990 A0A1W2PQD8 194 aa14.12□□□□□ -0.15
SF3B3-206ENST00000565990 POTEB3A0JP26 581 aa14.12□□□□□ -0.15
SF3B3-206ENST00000565990 MYCNP04198 464 aaPredicted RBP14.12□□□□□ -0.15
SF3B3-206ENST00000565990 ZNF286BP0CG31 522 aa14.12□□□□□ -0.15
SF3B3-206ENST00000565990 UBA7P41226 1012 aa14.12□□□□□ -0.15
SF3B3-206ENST00000565990 ME1P48163 572 aa14.12□□□□□ -0.15
SF3B3-206ENST00000565990 ADAM17P78536 824 aa14.12□□□□□ -0.15
SF3B3-206ENST00000565990 ITGA7Q13683 1181 aa14.12□□□□□ -0.15
SF3B3-206ENST00000565990 SNX17Q15036 470 aa14.12□□□□□ -0.15
SF3B3-206ENST00000565990 KIAA0753Q2KHM9 967 aa14.12□□□□□ -0.15
SF3B3-206ENST00000565990 UVSSAQ2YD98 709 aa14.12□□□□□ -0.15
SF3B3-206ENST00000565990 NBPF20Q3BBV1 942 aa14.12□□□□□ -0.15
SF3B3-206ENST00000565990 HAUS3Q68CZ6 603 aa14.12□□□□□ -0.15
SF3B3-206ENST00000565990 CAVIN1Q6NZI2 390 aaKnown RBP14.12□□□□□ -0.15
SF3B3-206ENST00000565990 PDXDC2PQ6P474 469 aa14.12□□□□□ -0.15
SF3B3-206ENST00000565990 POTEBQ6S5H4 581 aa14.12□□□□□ -0.15
SF3B3-206ENST00000565990 SLC39A5Q6ZMH5 540 aa14.12□□□□□ -0.15
SF3B3-206ENST00000565990 ZSCAN30Q86W11 494 aa14.12□□□□□ -0.15
SF3B3-206ENST00000565990 TPH2Q8IWU9 490 aa14.12□□□□□ -0.15
SF3B3-206ENST00000565990 BANK1Q8NDB2 785 aa14.12□□□□□ -0.15
SF3B3-206ENST00000565990 DIS3LQ8TF46 1054 aaKnown RBP14.12□□□□□ -0.15
SF3B3-206ENST00000565990 ATP8B4Q8TF62 1192 aa14.12□□□□□ -0.15
SF3B3-206ENST00000565990 PAWRQ96IZ0 340 aaKnown RBP14.12□□□□□ -0.15
SF3B3-206ENST00000565990 PNMA5Q96PV4 448 aa14.12□□□□□ -0.15
SF3B3-206ENST00000565990 LXNQ9BS40 222 aa14.12□□□□□ -0.15
SF3B3-206ENST00000565990 C11orf49Q9H6J7 331 aa14.12□□□□□ -0.15
SF3B3-206ENST00000565990 GDPD2Q9HCC8 539 aa14.12□□□□□ -0.15
SF3B3-206ENST00000565990 HBP1O60381 514 aa14.11□□□□□ -0.15
SF3B3-206ENST00000565990 PRPF40AO75400 957 aaKnown RBP14.11□□□□□ -0.15
SF3B3-206ENST00000565990 OATP04181 439 aa14.11□□□□□ -0.15
SF3B3-206ENST00000565990 CCT6AP40227 531 aaKnown RBP14.11□□□□□ -0.15
SF3B3-206ENST00000565990 PSMC6P62333 389 aa14.11□□□□□ -0.15
SF3B3-206ENST00000565990 CYP4A11Q02928 519 aa14.11□□□□□ -0.15
SF3B3-206ENST00000565990 TARBP2Q15633 366 aaKnown RBP14.11□□□□□ -0.15
SF3B3-206ENST00000565990 XKR3Q5GH77 459 aa14.11□□□□□ -0.15
SF3B3-206ENST00000565990 ZNF484Q5JVG2 852 aa14.11□□□□□ -0.15
SF3B3-206ENST00000565990 SPECC1Q5M775 1068 aa14.11□□□□□ -0.15
SF3B3-206ENST00000565990 RESP18Q5W5W9 173 aa14.11□□□□□ -0.15
SF3B3-206ENST00000565990 ANO5Q75V66 913 aa14.11□□□□□ -0.15
SF3B3-206ENST00000565990 NECAB2Q7Z6G3 386 aa14.11□□□□□ -0.15
SF3B3-206ENST00000565990 CABP7Q86V35 215 aa14.11□□□□□ -0.15
SF3B3-206ENST00000565990 SNX29Q8TEQ0 813 aa14.11□□□□□ -0.15
SF3B3-206ENST00000565990 SYMPKQ92797 1274 aaKnown RBP14.11□□□□□ -0.15
SF3B3-206ENST00000565990 FAM167AQ96KS9 214 aa14.11□□□□□ -0.15
SF3B3-206ENST00000565990 NACC1Q96RE7 527 aa14.11□□□□□ -0.15
SF3B3-206ENST00000565990 SENP6Q9GZR1 1112 aaPredicted RBP14.11□□□□□ -0.15
SF3B3-206ENST00000565990 NT5C3AQ9H0P0 336 aa14.11□□□□□ -0.15
SF3B3-206ENST00000565990 STARD7Q9NQZ5 370 aa14.11□□□□□ -0.15
SF3B3-206ENST00000565990 ANKEF1Q9NU02 776 aa14.11□□□□□ -0.15
SF3B3-206ENST00000565990 EVPLQ92817 2033 aa14.1□□□□□ -0.15
SF3B3-206ENST00000565990 A0A0U1RQG5 324 aaPredicted RBP14.1□□□□□ -0.15
SF3B3-206ENST00000565990 CCDC85CA6NKD9 419 aa14.1□□□□□ -0.15
SF3B3-206ENST00000565990 ZBTB42B2RXF5 422 aa14.1□□□□□ -0.15
SF3B3-206ENST00000565990 ARVCFO00192 962 aa14.1□□□□□ -0.15
SF3B3-206ENST00000565990 ZBTB39O15060 712 aa14.1□□□□□ -0.15
SF3B3-206ENST00000565990 GRB10Q13322 594 aa14.1□□□□□ -0.15
SF3B3-206ENST00000565990 HIC1Q14526 733 aa14.1□□□□□ -0.15
SF3B3-206ENST00000565990 TMEM119Q4V9L6 283 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms