RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 RXRBP28702 533 aa14.64□□□□□ -0.07
CX3CL1-204ENST00000565912 FAM133BQ5BKY9 247 aaKnown RBP14.64□□□□□ -0.07
CX3CL1-204ENST00000565912 CATSPER4Q7RTX7 472 aa14.64□□□□□ -0.07
CX3CL1-204ENST00000565912 SAMSN1Q9NSI8 373 aaKnown RBP14.64□□□□□ -0.07
CX3CL1-204ENST00000565912 KDM5CP41229 1560 aa14.64□□□□□ -0.07
CX3CL1-204ENST00000565912 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.64□□□□□ -0.07
CX3CL1-204ENST00000565912 CHEK2O96017 543 aa14.64□□□□□ -0.07
CX3CL1-204ENST00000565912 SERPING1P05155 500 aa14.64□□□□□ -0.07
CX3CL1-204ENST00000565912 HSPA8P11142 646 aaKnown RBP14.64□□□□□ -0.07
CX3CL1-204ENST00000565912 PLS3P13797 630 aa14.64□□□□□ -0.07
CX3CL1-204ENST00000565912 EEF1B2P24534 225 aaKnown RBP14.64□□□□□ -0.07
CX3CL1-204ENST00000565912 FAM160B2Q86V87 743 aa14.64□□□□□ -0.07
CX3CL1-204ENST00000565912 ERICH1Q86X53 443 aa14.64□□□□□ -0.07
CX3CL1-204ENST00000565912 THNSL1Q8IYQ7 743 aa14.64□□□□□ -0.07
CX3CL1-204ENST00000565912 DRC3Q9H069 523 aa14.64□□□□□ -0.07
CX3CL1-204ENST00000565912 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.64□□□□□ -0.07
CX3CL1-204ENST00000565912 SOWAHDA6NJG2 315 aa14.64□□□□□ -0.07
CX3CL1-204ENST00000565912 SH2B2O14492 632 aaPredicted RBP14.64□□□□□ -0.07
CX3CL1-204ENST00000565912 SLMAPQ14BN4 828 aa14.64□□□□□ -0.07
CX3CL1-204ENST00000565912 TDRD7Q8NHU6 1098 aaKnown RBP14.64□□□□□ -0.07
CX3CL1-204ENST00000565912 AP1M1Q9BXS5 423 aa14.64□□□□□ -0.07
CX3CL1-204ENST00000565912 ANLNQ9NQW6 1124 aa14.64□□□□□ -0.07
CX3CL1-204ENST00000565912 SFI1A8K8P3 1242 aa14.64□□□□□ -0.07
CX3CL1-204ENST00000565912 IKBKBO14920 756 aa14.64□□□□□ -0.07
CX3CL1-204ENST00000565912 SYNMO15061 1565 aa14.64□□□□□ -0.07
CX3CL1-204ENST00000565912 PEX19P40855 299 aa14.64□□□□□ -0.07
CX3CL1-204ENST00000565912 OCRLQ01968 901 aa14.64□□□□□ -0.07
CX3CL1-204ENST00000565912 CIAPIN1Q6FI81 312 aa14.64□□□□□ -0.07
CX3CL1-204ENST00000565912 TRMT10CQ7L0Y3 403 aaKnown RBP14.64□□□□□ -0.07
CX3CL1-204ENST00000565912 ZNF341Q9BYN7 854 aa14.64□□□□□ -0.07
CX3CL1-204ENST00000565912 PRR36Q9H6K5 1346 aa14.64□□□□□ -0.07
CX3CL1-204ENST00000565912 SUDS3Q9H7L9 328 aaPredicted RBP14.64□□□□□ -0.07
CX3CL1-204ENST00000565912 DNAJC17Q9NVM6 304 aaKnown RBP14.64□□□□□ -0.07
CX3CL1-204ENST00000565912 HACD3Q9P035 362 aa14.64□□□□□ -0.07
CX3CL1-204ENST00000565912 PRAMEF22A3QJZ6 481 aa14.64□□□□□ -0.07
CX3CL1-204ENST00000565912 RPSAP08865 295 aaKnown RBP14.64□□□□□ -0.07
CX3CL1-204ENST00000565912 CDC25BP30305 580 aa14.64□□□□□ -0.07
CX3CL1-204ENST00000565912 DALRD3Q5D0E6 543 aaKnown RBP14.64□□□□□ -0.07
CX3CL1-204ENST00000565912 HABP4Q5JVS0 413 aaKnown RBP14.64□□□□□ -0.07
CX3CL1-204ENST00000565912 KLC3Q6P597 504 aa14.64□□□□□ -0.07
CX3CL1-204ENST00000565912 F8W8V4 182 aa14.63□□□□□ -0.07
CX3CL1-204ENST00000565912 PEX3P56589 373 aa14.63□□□□□ -0.07
CX3CL1-204ENST00000565912 RMDN2Q96LZ7 410 aa14.63□□□□□ -0.07
CX3CL1-204ENST00000565912 GPR101Q96P66 508 aaPredicted RBP14.63□□□□□ -0.07
CX3CL1-204ENST00000565912 NGRNQ9NPE2 291 aaKnown RBP14.63□□□□□ -0.07
CX3CL1-204ENST00000565912 ZSWIM5Q9P217 1185 aa14.63□□□□□ -0.07
CX3CL1-204ENST00000565912 THEGQ9P2T0 379 aa14.63□□□□□ -0.07
CX3CL1-204ENST00000565912 STAP2Q9UGK3 403 aa14.63□□□□□ -0.07
CX3CL1-204ENST00000565912 PCDHA13Q9Y5I0 950 aa14.63□□□□□ -0.07
CX3CL1-204ENST00000565912 PRPF3O43395 683 aaKnown RBP14.63□□□□□ -0.07
CX3CL1-204ENST00000565912 CCNE1P24864 410 aa14.63□□□□□ -0.07
CX3CL1-204ENST00000565912 PSMA2P25787 234 aa14.63□□□□□ -0.07
CX3CL1-204ENST00000565912 PPARGP37231 505 aaPredicted RBP14.63□□□□□ -0.07
CX3CL1-204ENST00000565912 ELMSAN1Q6PJG2 1045 aa14.63□□□□□ -0.07
CX3CL1-204ENST00000565912 PNMA6FA0A0J9YX94 578 aa14.63□□□□□ -0.07
CX3CL1-204ENST00000565912 MYL1P05976 194 aa14.63□□□□□ -0.07
CX3CL1-204ENST00000565912 MECOMQ03112 1051 aa14.63□□□□□ -0.07
CX3CL1-204ENST00000565912 PSMD2Q13200 908 aa14.63□□□□□ -0.07
CX3CL1-204ENST00000565912 NKX1-1Q15270 411 aaPredicted RBP14.63□□□□□ -0.07
CX3CL1-204ENST00000565912 PRPF38AQ8NAV1 312 aaKnown RBP14.63□□□□□ -0.07
CX3CL1-204ENST00000565912 IGSF1Q8N6C5 1336 aa14.63□□□□□ -0.07
CX3CL1-204ENST00000565912 HSPA6P17066 643 aa14.63□□□□□ -0.07
CX3CL1-204ENST00000565912 CIITAP33076 1130 aa14.63□□□□□ -0.07
CX3CL1-204ENST00000565912 DR1Q01658 176 aa14.63□□□□□ -0.07
CX3CL1-204ENST00000565912 RNF207Q6ZRF8 634 aa14.63□□□□□ -0.07
CX3CL1-204ENST00000565912 NDUFAF2Q8N183 169 aa14.63□□□□□ -0.07
CX3CL1-204ENST00000565912 PYROXD1Q8WU10 500 aa14.63□□□□□ -0.07
CX3CL1-204ENST00000565912 TRIM4Q9C037 500 aa14.63□□□□□ -0.07
CX3CL1-204ENST00000565912 THAP9Q9H5L6 903 aa14.63□□□□□ -0.07
CX3CL1-204ENST00000565912 PCDHB6Q9Y5E3 794 aa14.63□□□□□ -0.07
CX3CL1-204ENST00000565912 ZBBXA8MT70 800 aa14.62□□□□□ -0.07
CX3CL1-204ENST00000565912 CDK8P49336 464 aa14.62□□□□□ -0.07
CX3CL1-204ENST00000565912 ESRRGP62508 458 aa14.62□□□□□ -0.07
CX3CL1-204ENST00000565912 PPP6R3Q5H9R7 873 aaPredicted RBP14.62□□□□□ -0.07
CX3CL1-204ENST00000565912 RC3H1Q5TC82 1133 aaKnown RBP14.62□□□□□ -0.07
CX3CL1-204ENST00000565912 MMTAG2Q9BU76 263 aaKnown RBP14.62□□□□□ -0.07
CX3CL1-204ENST00000565912 RASGRF2O14827 1237 aa14.62□□□□□ -0.07
CX3CL1-204ENST00000565912 ZNF500O60304 480 aaPredicted RBP14.62□□□□□ -0.07
CX3CL1-204ENST00000565912 NSUN2Q08J23 767 aaKnown RBP eCLIP14.62□□□□□ -0.07
CX3CL1-204ENST00000565912 ZNF394Q53GI3 561 aa14.62□□□□□ -0.07
CX3CL1-204ENST00000565912 RNF219Q5W0B1 726 aaPredicted RBP14.62□□□□□ -0.07
CX3CL1-204ENST00000565912 KRT27Q7Z3Y8 459 aa14.62□□□□□ -0.07
CX3CL1-204ENST00000565912 LINC00301Q8NCQ3 95 aa14.62□□□□□ -0.07
CX3CL1-204ENST00000565912 MAML1Q92585 1016 aa14.62□□□□□ -0.07
CX3CL1-204ENST00000565912 KLHL29Q96CT2 875 aa14.62□□□□□ -0.07
CX3CL1-204ENST00000565912 BHMT2Q9H2M3 363 aa14.62□□□□□ -0.07
CX3CL1-204ENST00000565912 HNRNPCL2B2RXH8 293 aa14.62□□□□□ -0.07
CX3CL1-204ENST00000565912 HNRNPCL1O60812 293 aaKnown RBP14.62□□□□□ -0.07
CX3CL1-204ENST00000565912 ZBED6P86452 979 aa14.62□□□□□ -0.07
CX3CL1-204ENST00000565912 SEPT2Q15019 361 aa14.62□□□□□ -0.07
CX3CL1-204ENST00000565912 ATG16L1Q676U5 607 aa14.62□□□□□ -0.07
CX3CL1-204ENST00000565912 DHX38Q92620 1227 aaKnown RBP14.62□□□□□ -0.07
CX3CL1-204ENST00000565912 OSBP2Q969R2 916 aa14.62□□□□□ -0.07
CX3CL1-204ENST00000565912 SLFN12LQ6IEE8 588 aa14.62□□□□□ -0.07
CX3CL1-204ENST00000565912 SZRD1Q7Z422 152 aa14.62□□□□□ -0.07
CX3CL1-204ENST00000565912 PDIK1LQ8N165 341 aa14.62□□□□□ -0.07
CX3CL1-204ENST00000565912 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.62□□□□□ -0.07
CX3CL1-204ENST00000565912 MID2Q9UJV3 735 aa14.62□□□□□ -0.07
CX3CL1-204ENST00000565912 NOVA2Q9UNW9 492 aaKnown RBP14.62□□□□□ -0.07
CX3CL1-204ENST00000565912 CYP27A1Q02318 531 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms