RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 NEK9Q8TD19 979 aa17.93■□□□□ 0.46
RAB40C-208ENST00000564703 NOC4LQ9BVI4 516 aaKnown RBP17.93■□□□□ 0.46
RAB40C-208ENST00000564703 ZSWIM4Q9H7M6 989 aa17.93■□□□□ 0.46
RAB40C-208ENST00000564703 TUBE1Q9UJT0 475 aa17.93■□□□□ 0.46
RAB40C-208ENST00000564703 TRIP12Q14669 1992 aaPredicted RBP17.93■□□□□ 0.46
RAB40C-208ENST00000564703 RPLP2P05387 115 aaKnown RBP17.92■□□□□ 0.46
RAB40C-208ENST00000564703 ZSCAN22P10073 491 aaPredicted RBP17.92■□□□□ 0.46
RAB40C-208ENST00000564703 KLRC1P26715 233 aa17.92■□□□□ 0.46
RAB40C-208ENST00000564703 CCL23P55773 120 aa17.92■□□□□ 0.46
RAB40C-208ENST00000564703 PRKCEQ02156 737 aa17.92■□□□□ 0.46
RAB40C-208ENST00000564703 RESTQ13127 1097 aa17.92■□□□□ 0.46
RAB40C-208ENST00000564703 FOXD4L5Q5VV16 416 aaPredicted RBP17.92■□□□□ 0.46
RAB40C-208ENST00000564703 TAF2Q6P1X5 1199 aa17.92■□□□□ 0.46
RAB40C-208ENST00000564703 SERINC5Q86VE9 423 aa17.92■□□□□ 0.46
RAB40C-208ENST00000564703 FOXD4L4Q8WXT5 416 aaPredicted RBP17.92■□□□□ 0.46
RAB40C-208ENST00000564703 DYDC2Q96IM9 177 aa17.92■□□□□ 0.46
RAB40C-208ENST00000564703 EIF2AK1Q9BQI3 630 aaKnown RBP17.92■□□□□ 0.46
RAB40C-208ENST00000564703 LRWD1Q9UFC0 647 aa17.92■□□□□ 0.46
RAB40C-208ENST00000564703 IGSF9BQ9UPX0 1349 aa17.92■□□□□ 0.46
RAB40C-208ENST00000564703 COL1A2P08123 1366 aa17.91■□□□□ 0.46
RAB40C-208ENST00000564703 PITPNM1O00562 1244 aa17.91■□□□□ 0.46
RAB40C-208ENST00000564703 MAGEB2O15479 319 aa17.91■□□□□ 0.46
RAB40C-208ENST00000564703 ZNF862O60290 1169 aa17.91■□□□□ 0.46
RAB40C-208ENST00000564703 HOXC8P31273 242 aa17.91■□□□□ 0.46
RAB40C-208ENST00000564703 ANP32AP39687 249 aaKnown RBP17.91■□□□□ 0.46
RAB40C-208ENST00000564703 THPOP40225 353 aa17.91■□□□□ 0.46
RAB40C-208ENST00000564703 MAGEA10P43363 369 aaPredicted RBP17.91■□□□□ 0.46
RAB40C-208ENST00000564703 FXR2P51116 673 aaKnown RBP eCLIP17.91■□□□□ 0.46
RAB40C-208ENST00000564703 ADAM17P78536 824 aa17.91■□□□□ 0.46
RAB40C-208ENST00000564703 CYP4A11Q02928 519 aa17.91■□□□□ 0.46
RAB40C-208ENST00000564703 FPGSQ05932 587 aa17.91■□□□□ 0.46
RAB40C-208ENST00000564703 SPIRE1Q08AE8 756 aa17.91■□□□□ 0.46
RAB40C-208ENST00000564703 PPIGQ13427 754 aaKnown RBP eCLIP17.91■□□□□ 0.46
RAB40C-208ENST00000564703 CTTNQ14247 550 aaKnown RBP17.91■□□□□ 0.46
RAB40C-208ENST00000564703 HIC1Q14526 733 aa17.91■□□□□ 0.46
RAB40C-208ENST00000564703 SF3A1Q15459 793 aaKnown RBP17.91■□□□□ 0.46
RAB40C-208ENST00000564703 UGCGQ16739 394 aa17.91■□□□□ 0.46
RAB40C-208ENST00000564703 ARL6IP4Q66PJ3 421 aaKnown RBP17.91■□□□□ 0.46
RAB40C-208ENST00000564703 C4orf19Q8IY42 314 aa17.91■□□□□ 0.46
RAB40C-208ENST00000564703 RPUSD2Q8IZ73 545 aaKnown RBP17.91■□□□□ 0.46
RAB40C-208ENST00000564703 ZNF396Q96N95 335 aaPredicted RBP17.91■□□□□ 0.46
RAB40C-208ENST00000564703 UBE2OQ9C0C9 1292 aaKnown RBP17.91■□□□□ 0.46
RAB40C-208ENST00000564703 RGL1Q9NZL6 768 aa17.91■□□□□ 0.46
RAB40C-208ENST00000564703 SEPT9Q9UHD8 586 aaPredicted RBP17.91■□□□□ 0.46
RAB40C-208ENST00000564703 CEP290O15078 2479 aa17.9■□□□□ 0.46
RAB40C-208ENST00000564703 MBLAC1A4D2B0 266 aaPredicted RBP17.9■□□□□ 0.46
RAB40C-208ENST00000564703 POTEMA6NI47 508 aa17.9■□□□□ 0.46
RAB40C-208ENST00000564703 SLITRK3O94933 977 aa17.9■□□□□ 0.46
RAB40C-208ENST00000564703 PARNO95453 639 aaKnown RBP17.9■□□□□ 0.46
RAB40C-208ENST00000564703 CKBP12277 381 aa17.9■□□□□ 0.46
RAB40C-208ENST00000564703 ITGB8P26012 769 aa17.9■□□□□ 0.46
RAB40C-208ENST00000564703 TMOD1P28289 359 aa17.9■□□□□ 0.46
RAB40C-208ENST00000564703 ATP2C1P98194 919 aaPredicted RBP17.9■□□□□ 0.46
RAB40C-208ENST00000564703 HAUS3Q68CZ6 603 aa17.9■□□□□ 0.46
RAB40C-208ENST00000564703 MTHFD1LQ6UB35 978 aa17.9■□□□□ 0.46
RAB40C-208ENST00000564703 EXOC8Q8IYI6 725 aa17.9■□□□□ 0.46
RAB40C-208ENST00000564703 TRAPPC12Q8WVT3 735 aa17.9■□□□□ 0.46
RAB40C-208ENST00000564703 HSD17B14Q9BPX1 270 aa17.9■□□□□ 0.46
RAB40C-208ENST00000564703 LXNQ9BS40 222 aa17.9■□□□□ 0.46
RAB40C-208ENST00000564703 NIFKQ9BYG3 293 aaKnown RBP17.9■□□□□ 0.46
RAB40C-208ENST00000564703 PCDHA2Q9Y5H9 948 aa17.9■□□□□ 0.46
RAB40C-208ENST00000564703 M0QZ92 97 aa17.89■□□□□ 0.45
RAB40C-208ENST00000564703 CAND2O75155 1236 aa17.89■□□□□ 0.45
RAB40C-208ENST00000564703 IQCF3P0C7M6 154 aa17.89■□□□□ 0.45
RAB40C-208ENST00000564703 SELPP16109 830 aa17.89■□□□□ 0.45
RAB40C-208ENST00000564703 CEBPZQ03701 1054 aaKnown RBP17.89■□□□□ 0.45
RAB40C-208ENST00000564703 TBC1D8BQ0IIM8 1120 aa17.89■□□□□ 0.45
RAB40C-208ENST00000564703 MARCH8Q5T0T0 291 aa17.89■□□□□ 0.45
RAB40C-208ENST00000564703 KRT79Q5XKE5 535 aa17.89■□□□□ 0.45
RAB40C-208ENST00000564703 FAM173BQ6P4H8 233 aa17.89■□□□□ 0.45
RAB40C-208ENST00000564703 NME8Q8N427 588 aa17.89■□□□□ 0.45
RAB40C-208ENST00000564703 METTL13Q8N6R0 699 aa17.89■□□□□ 0.45
RAB40C-208ENST00000564703 CCDC43Q96MW1 224 aaKnown RBP17.89■□□□□ 0.45
RAB40C-208ENST00000564703 CTAGE1Q96RT6 745 aa17.89■□□□□ 0.45
RAB40C-208ENST00000564703 TUFT1Q9NNX1 390 aa17.89■□□□□ 0.45
RAB40C-208ENST00000564703 MKI67P46013 3256 aaKnown RBP17.89■□□□□ 0.45
RAB40C-208ENST00000564703 DNAH12Q6ZR08 3092 aa17.88■□□□□ 0.45
RAB40C-208ENST00000564703 WDR81Q562E7 1941 aa17.88■□□□□ 0.45
RAB40C-208ENST00000564703 VWA3AA6NCI4 1184 aa17.88■□□□□ 0.45
RAB40C-208ENST00000564703 RSPH10B2B2RC85 870 aa17.88■□□□□ 0.45
RAB40C-208ENST00000564703 F13A1P00488 732 aa17.88■□□□□ 0.45
RAB40C-208ENST00000564703 RSPH10BP0C881 870 aa17.88■□□□□ 0.45
RAB40C-208ENST00000564703 XRCC6P12956 609 aaKnown RBP eCLIP17.88■□□□□ 0.45
RAB40C-208ENST00000564703 CSF2RAP15509 400 aa17.88■□□□□ 0.45
RAB40C-208ENST00000564703 YWHABP31946 246 aaKnown RBP17.88■□□□□ 0.45
RAB40C-208ENST00000564703 RFC2P35250 354 aa17.88■□□□□ 0.45
RAB40C-208ENST00000564703 CCT6AP40227 531 aaKnown RBP17.88■□□□□ 0.45
RAB40C-208ENST00000564703 DNM2P50570 870 aa17.88■□□□□ 0.45
RAB40C-208ENST00000564703 MTERF2Q49AM1 385 aa17.88■□□□□ 0.45
RAB40C-208ENST00000564703 ZNF618Q5T7W0 954 aa17.88■□□□□ 0.45
RAB40C-208ENST00000564703 IER5Q5VY09 327 aa17.88■□□□□ 0.45
RAB40C-208ENST00000564703 CHRDL2Q6WN34 429 aa17.88■□□□□ 0.45
RAB40C-208ENST00000564703 LRRC8DQ7L1W4 858 aa17.88■□□□□ 0.45
RAB40C-208ENST00000564703 DNAJB3Q8WWF6 145 aa17.88■□□□□ 0.45
RAB40C-208ENST00000564703 DHX38Q92620 1227 aaKnown RBP17.88■□□□□ 0.45
RAB40C-208ENST00000564703 SCLYQ96I15 445 aa17.88■□□□□ 0.45
RAB40C-208ENST00000564703 CEP170P1Q96L14 293 aa17.88■□□□□ 0.45
RAB40C-208ENST00000564703 GDF15Q99988 308 aa17.88■□□□□ 0.45
RAB40C-208ENST00000564703 JPH2Q9BR39 696 aaPredicted RBP17.88■□□□□ 0.45
RAB40C-208ENST00000564703 POLR3CQ9BUI4 534 aaPredicted RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms