RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 TRMT10BQ6PF06 316 aaKnown RBP4.68□□□□□ -1.66
CHD9-211ENST00000564600 C16orf59Q7L2K0 433 aa4.68□□□□□ -1.66
CHD9-211ENST00000564600 DPH6Q7L8W6 267 aa4.68□□□□□ -1.66
CHD9-211ENST00000564600 GPR155Q7Z3F1 870 aa4.68□□□□□ -1.66
CHD9-211ENST00000564600 ZC3H7AQ8IWR0 971 aaKnown RBP4.68□□□□□ -1.66
CHD9-211ENST00000564600 CISD2Q8N5K1 135 aaKnown RBP4.68□□□□□ -1.66
CHD9-211ENST00000564600 CLUHP3Q96NS8 147 aa4.68□□□□□ -1.66
CHD9-211ENST00000564600 IPO9Q96P70 1041 aaKnown RBP4.68□□□□□ -1.66
CHD9-211ENST00000564600 OSBPL2Q9H1P3 480 aa4.68□□□□□ -1.66
CHD9-211ENST00000564600 DLL4Q9NR61 685 aa4.68□□□□□ -1.66
CHD9-211ENST00000564600 KCND1Q9NSA2 647 aa4.68□□□□□ -1.66
CHD9-211ENST00000564600 C11orf21Q9P2W6 132 aa4.68□□□□□ -1.66
CHD9-211ENST00000564600 ZFP69BQ9UJL9 534 aa4.68□□□□□ -1.66
CHD9-211ENST00000564600 C9orf118A6NHY6 69 aa4.67□□□□□ -1.66
CHD9-211ENST00000564600 FOXS1O43638 330 aa4.67□□□□□ -1.66
CHD9-211ENST00000564600 KNG1P01042 644 aa4.67□□□□□ -1.66
CHD9-211ENST00000564600 EPHB4P54760 987 aa4.67□□□□□ -1.66
CHD9-211ENST00000564600 DBPQ10586 325 aaPredicted RBP4.67□□□□□ -1.66
CHD9-211ENST00000564600 TRIM61Q5EBN2 209 aa4.67□□□□□ -1.66
CHD9-211ENST00000564600 BTBD8Q5XKL5 378 aa4.67□□□□□ -1.66
CHD9-211ENST00000564600 PKN3Q6P5Z2 889 aa4.67□□□□□ -1.66
CHD9-211ENST00000564600 BRAPQ7Z569 592 aa4.67□□□□□ -1.66
CHD9-211ENST00000564600 PLEKHH3Q7Z736 793 aa4.67□□□□□ -1.66
CHD9-211ENST00000564600 THAP3Q8WTV1 239 aaPredicted RBP4.67□□□□□ -1.66
CHD9-211ENST00000564600 LRRC37BQ96QE4 947 aa4.67□□□□□ -1.66
CHD9-211ENST00000564600 TACO1Q9BSH4 297 aaKnown RBP4.67□□□□□ -1.66
CHD9-211ENST00000564600 TRIM39Q9HCM9 518 aa4.67□□□□□ -1.66
CHD9-211ENST00000564600 RIC8BQ9NVN3 520 aa4.67□□□□□ -1.66
CHD9-211ENST00000564600 TCRBV16S1A1N1A0A5B0 115 aa4.66□□□□□ -1.66
CHD9-211ENST00000564600 RAPGEF3O95398 923 aa4.66□□□□□ -1.66
CHD9-211ENST00000564600 C4BPAP04003 597 aaKnown RBP4.66□□□□□ -1.66
CHD9-211ENST00000564600 ENO2P09104 434 aaPredicted RBP4.66□□□□□ -1.66
CHD9-211ENST00000564600 MC4RP32245 332 aa4.66□□□□□ -1.66
CHD9-211ENST00000564600 SURF1Q15526 300 aa4.66□□□□□ -1.66
CHD9-211ENST00000564600 NRN1LQ496H8 165 aa4.66□□□□□ -1.66
CHD9-211ENST00000564600 NOSTRINQ8IVI9 506 aa4.66□□□□□ -1.66
CHD9-211ENST00000564600 PIF1Q9H611 641 aa4.66□□□□□ -1.66
CHD9-211ENST00000564600 NCOA5Q9HCD5 579 aaKnown RBP4.66□□□□□ -1.66
CHD9-211ENST00000564600 ARHGAP20Q9P2F6 1191 aa4.66□□□□□ -1.66
CHD9-211ENST00000564600 PTPN22Q9Y2R2 807 aa4.66□□□□□ -1.66
CHD9-211ENST00000564600 RASSF10A6NK89 507 aa4.65□□□□□ -1.67
CHD9-211ENST00000564600 KCNQ2O43526 872 aa4.65□□□□□ -1.67
CHD9-211ENST00000564600 CNOT4O95628 575 aaKnown RBP4.65□□□□□ -1.67
CHD9-211ENST00000564600 ST5P78524 1137 aa4.65□□□□□ -1.67
CHD9-211ENST00000564600 LACTBP83111 547 aaPredicted RBP4.65□□□□□ -1.67
CHD9-211ENST00000564600 NFATC3Q12968 1075 aa4.65□□□□□ -1.67
CHD9-211ENST00000564600 SMAD2Q15796 467 aaKnown RBP4.65□□□□□ -1.67
CHD9-211ENST00000564600 CRY1Q16526 586 aa4.65□□□□□ -1.67
CHD9-211ENST00000564600 CCDC144BQ3MJ40 725 aa4.65□□□□□ -1.67
CHD9-211ENST00000564600 SOGA3Q5TF21 947 aa4.65□□□□□ -1.67
CHD9-211ENST00000564600 OVCH1Q7RTY7 1134 aa4.65□□□□□ -1.67
CHD9-211ENST00000564600 ZSWIM2Q8NEG5 633 aa4.65□□□□□ -1.67
CHD9-211ENST00000564600 EXTL1Q92935 676 aa4.65□□□□□ -1.67
CHD9-211ENST00000564600 CHFRQ96EP1 664 aa4.65□□□□□ -1.67
CHD9-211ENST00000564600 ADOQ96SZ5 270 aa4.65□□□□□ -1.67
CHD9-211ENST00000564600 BTBD7Q9P203 1132 aa4.65□□□□□ -1.67
CHD9-211ENST00000564600 FTSJ1Q9UET6 329 aa4.65□□□□□ -1.67
CHD9-211ENST00000564600 SFMBT1Q9UHJ3 866 aa4.65□□□□□ -1.67
CHD9-211ENST00000564600 ATP23Q9Y6H3 246 aa4.65□□□□□ -1.67
CHD9-211ENST00000564600 SCDO00767 359 aa4.64□□□□□ -1.67
CHD9-211ENST00000564600 PPP1R12AO14974 1030 aaPredicted RBP4.64□□□□□ -1.67
CHD9-211ENST00000564600 MPIG6BO95866 241 aa4.64□□□□□ -1.67
CHD9-211ENST00000564600 FOXE3Q13461 319 aa4.64□□□□□ -1.67
CHD9-211ENST00000564600 USP39Q53GS9 565 aaKnown RBP4.64□□□□□ -1.67
CHD9-211ENST00000564600 FIGNQ5HY92 759 aa4.64□□□□□ -1.67
CHD9-211ENST00000564600 ZC3H12BQ5HYM0 836 aaKnown RBP4.64□□□□□ -1.67
CHD9-211ENST00000564600 SLFN13Q68D06 897 aa4.64□□□□□ -1.67
CHD9-211ENST00000564600 TCTN3Q6NUS6 607 aa4.64□□□□□ -1.67
CHD9-211ENST00000564600 LRSAM1Q6UWE0 723 aa4.64□□□□□ -1.67
CHD9-211ENST00000564600 MAGEB10Q96LZ2 347 aaPredicted RBP4.64□□□□□ -1.67
CHD9-211ENST00000564600 CSRNP2Q9H175 543 aa4.64□□□□□ -1.67
CHD9-211ENST00000564600 IKZF4Q9H2S9 585 aa4.64□□□□□ -1.67
CHD9-211ENST00000564600 ZSWIM4Q9H7M6 989 aa4.64□□□□□ -1.67
CHD9-211ENST00000564600 PRAMEF25A6NGN4 478 aa4.63□□□□□ -1.67
CHD9-211ENST00000564600 PLSCR1O15162 318 aa4.63□□□□□ -1.67
CHD9-211ENST00000564600 EFCAB14O75071 495 aa4.63□□□□□ -1.67
CHD9-211ENST00000564600 FBXO21O94952 628 aa4.63□□□□□ -1.67
CHD9-211ENST00000564600 ZNF202O95125 648 aa4.63□□□□□ -1.67
CHD9-211ENST00000564600 MMEP08473 750 aa4.63□□□□□ -1.67
CHD9-211ENST00000564600 ZNF888P0CJ79 500 aaPredicted RBP4.63□□□□□ -1.67
CHD9-211ENST00000564600 TGFB2P61812 414 aa4.63□□□□□ -1.67
CHD9-211ENST00000564600 ZNF460Q14592 562 aa4.63□□□□□ -1.67
CHD9-211ENST00000564600 FAM47CQ5HY64 1035 aa4.63□□□□□ -1.67
CHD9-211ENST00000564600 Q6ZUG5 572 aa4.63□□□□□ -1.67
CHD9-211ENST00000564600 NLGN4XQ8N0W4 816 aa4.63□□□□□ -1.67
CHD9-211ENST00000564600 KLHL36Q8N4N3 616 aa4.63□□□□□ -1.67
CHD9-211ENST00000564600 IGSF22Q8N9C0 903 aa4.63□□□□□ -1.67
CHD9-211ENST00000564600 SH3TC2Q8TF17 1288 aa4.63□□□□□ -1.67
CHD9-211ENST00000564600 WRNIP1Q96S55 665 aa4.63□□□□□ -1.67
CHD9-211ENST00000564600 AMNQ9BXJ7 453 aa4.63□□□□□ -1.67
CHD9-211ENST00000564600 MRPL4Q9BYD3 311 aaKnown RBP4.63□□□□□ -1.67
CHD9-211ENST00000564600 CELF4Q9BZC1 486 aaKnown RBP4.63□□□□□ -1.67
CHD9-211ENST00000564600 ADAM29Q9UKF5 820 aa4.63□□□□□ -1.67
CHD9-211ENST00000564600 NUB1Q9Y5A7 615 aa4.63□□□□□ -1.67
CHD9-211ENST00000564600 CLASP2O75122 1294 aaKnown RBP4.62□□□□□ -1.67
CHD9-211ENST00000564600 CYP7B1O75881 506 aa4.62□□□□□ -1.67
CHD9-211ENST00000564600 DNAJC8O75937 253 aaPredicted RBP4.62□□□□□ -1.67
CHD9-211ENST00000564600 ZBTB48P10074 688 aaPredicted RBP4.62□□□□□ -1.67
CHD9-211ENST00000564600 SDSP20132 328 aa4.62□□□□□ -1.67
CHD9-211ENST00000564600 AOAHP28039 575 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms