RNA–Protein interactions for RNA: ENST00000563888.6

TCF4-221, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-221ENST00000563888 SEZ6LQ9BYH1 1024 aa8.72□□□□□ -1.01
TCF4-221ENST00000563888 EHD4Q9H223 541 aa8.72□□□□□ -1.01
TCF4-221ENST00000563888 FOXD3Q9UJU5 478 aaPredicted RBP8.72□□□□□ -1.01
TCF4-221ENST00000563888 ZNF214Q9UL59 606 aaPredicted RBP8.72□□□□□ -1.01
TCF4-221ENST00000563888 RIPK3Q9Y572 518 aa8.72□□□□□ -1.01
TCF4-221ENST00000563888 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.72□□□□□ -1.01
TCF4-221ENST00000563888 SIPA1L1O43166 1804 aa8.72□□□□□ -1.01
TCF4-221ENST00000563888 SETXQ7Z333 2677 aaKnown RBP8.71□□□□□ -1.01
TCF4-221ENST00000563888 EP300Q09472 2414 aaPredicted RBP8.71□□□□□ -1.01
TCF4-221ENST00000563888 CDC14CA4D256 554 aa8.71□□□□□ -1.02
TCF4-221ENST00000563888 GJB5O95377 273 aa8.71□□□□□ -1.02
TCF4-221ENST00000563888 CYP7A1P22680 504 aa8.71□□□□□ -1.02
TCF4-221ENST00000563888 COPB2P35606 906 aa8.71□□□□□ -1.02
TCF4-221ENST00000563888 LTBRP36941 435 aa8.71□□□□□ -1.02
TCF4-221ENST00000563888 CHMP4BP1P59074 171 aa8.71□□□□□ -1.02
TCF4-221ENST00000563888 DLX2Q07687 328 aaPredicted RBP8.71□□□□□ -1.02
TCF4-221ENST00000563888 TIGD5Q53EQ6 642 aa8.71□□□□□ -1.02
TCF4-221ENST00000563888 TMEM63BQ5T3F8 832 aa8.71□□□□□ -1.02
TCF4-221ENST00000563888 LCE2AQ5TA79 106 aaPredicted RBP8.71□□□□□ -1.02
TCF4-221ENST00000563888 RPAINQ86UA6 219 aa8.71□□□□□ -1.02
TCF4-221ENST00000563888 SIAH1Q8IUQ4 282 aa8.71□□□□□ -1.02
TCF4-221ENST00000563888 CPXCR1Q8N123 301 aa8.71□□□□□ -1.02
TCF4-221ENST00000563888 FBF1Q8TES7 1133 aa8.71□□□□□ -1.02
TCF4-221ENST00000563888 NKD2Q969F2 451 aaPredicted RBP8.71□□□□□ -1.02
TCF4-221ENST00000563888 GTPBP3Q969Y2 492 aaKnown RBP8.71□□□□□ -1.02
TCF4-221ENST00000563888 RMDN1Q96DB5 314 aa8.71□□□□□ -1.02
TCF4-221ENST00000563888 IGFLR1Q9H665 355 aa8.71□□□□□ -1.02
TCF4-221ENST00000563888 VCPKMTQ9H867 229 aa8.71□□□□□ -1.02
TCF4-221ENST00000563888 TMEM63CQ9P1W3 806 aa8.71□□□□□ -1.02
TCF4-221ENST00000563888 KIAA1522Q9P206 1035 aaPredicted RBP8.71□□□□□ -1.02
TCF4-221ENST00000563888 ADAMTS5Q9UNA0 930 aa8.71□□□□□ -1.02
TCF4-221ENST00000563888 DDX49Q9Y6V7 483 aaKnown RBP8.71□□□□□ -1.02
TCF4-221ENST00000563888 DNAJC25-GNG10A0A024R161 153 aa8.7□□□□□ -1.02
TCF4-221ENST00000563888 TERTO14746 1132 aaKnown RBP8.7□□□□□ -1.02
TCF4-221ENST00000563888 WDR46O15213 610 aaKnown RBP8.7□□□□□ -1.02
TCF4-221ENST00000563888 MBTPS2O43462 519 aa8.7□□□□□ -1.02
TCF4-221ENST00000563888 BNIP3LO60238 219 aa8.7□□□□□ -1.02
TCF4-221ENST00000563888 SORBS3O60504 671 aa8.7□□□□□ -1.02
TCF4-221ENST00000563888 CSPG5O95196 566 aa8.7□□□□□ -1.02
TCF4-221ENST00000563888 MYL3P08590 195 aa8.7□□□□□ -1.02
TCF4-221ENST00000563888 UBTFL1P0CB47 393 aaPredicted RBP8.7□□□□□ -1.02
TCF4-221ENST00000563888 CES1P23141 567 aa8.7□□□□□ -1.02
TCF4-221ENST00000563888 NKX3-2P78367 333 aa8.7□□□□□ -1.02
TCF4-221ENST00000563888 CNTN2Q02246 1040 aa8.7□□□□□ -1.02
TCF4-221ENST00000563888 NFX1Q12986 1120 aaKnown RBP8.7□□□□□ -1.02
TCF4-221ENST00000563888 GPM6BQ13491 265 aa8.7□□□□□ -1.02
TCF4-221ENST00000563888 COL9A2Q14055 689 aaPredicted RBP8.7□□□□□ -1.02
TCF4-221ENST00000563888 EEPD1Q7L9B9 569 aa8.7□□□□□ -1.02
TCF4-221ENST00000563888 ABHD17AQ96GS6 310 aa8.7□□□□□ -1.02
TCF4-221ENST00000563888 TEX13BQ9BXU2 312 aa8.7□□□□□ -1.02
TCF4-221ENST00000563888 NSUN3Q9H649 340 aaKnown RBP8.7□□□□□ -1.02
TCF4-221ENST00000563888 SH2D4AQ9H788 454 aa8.7□□□□□ -1.02
TCF4-221ENST00000563888 COPRSQ9NQ92 184 aa8.7□□□□□ -1.02
TCF4-221ENST00000563888 PDGFCQ9NRA1 345 aa8.7□□□□□ -1.02
TCF4-221ENST00000563888 CUEDC1Q9NWM3 386 aaPredicted RBP8.7□□□□□ -1.02
TCF4-221ENST00000563888 RALYQ9UKM9 306 aaKnown RBP8.7□□□□□ -1.02
TCF4-221ENST00000563888 PPP1R9AQ9ULJ8 1098 aa8.7□□□□□ -1.02
TCF4-221ENST00000563888 ATXN7L1Q9ULK2 861 aaPredicted RBP8.7□□□□□ -1.02
TCF4-221ENST00000563888 TMX2Q9Y320 296 aa8.7□□□□□ -1.02
TCF4-221ENST00000563888 EFSO43281 561 aa8.69□□□□□ -1.02
TCF4-221ENST00000563888 PDGFBP01127 241 aaPredicted RBP8.69□□□□□ -1.02
TCF4-221ENST00000563888 CYP2E1P05181 493 aaPredicted RBP8.69□□□□□ -1.02
TCF4-221ENST00000563888 UQCRFS1P1P0C7P4 283 aa8.69□□□□□ -1.02
TCF4-221ENST00000563888 RARAP10276 462 aa8.69□□□□□ -1.02
TCF4-221ENST00000563888 TARSP26639 723 aaKnown RBP8.69□□□□□ -1.02
TCF4-221ENST00000563888 GRNP28799 593 aaKnown RBP8.69□□□□□ -1.02
TCF4-221ENST00000563888 NBL1P41271 181 aa8.69□□□□□ -1.02
TCF4-221ENST00000563888 ICA1Q05084 483 aa8.69□□□□□ -1.02
TCF4-221ENST00000563888 SIGLEC14Q08ET2 396 aa8.69□□□□□ -1.02
TCF4-221ENST00000563888 BFSP2Q13515 415 aa8.69□□□□□ -1.02
TCF4-221ENST00000563888 EPC2Q52LR7 807 aa8.69□□□□□ -1.02
TCF4-221ENST00000563888 FAM83BQ5T0W9 1011 aa8.69□□□□□ -1.02
TCF4-221ENST00000563888 TMEM179Q6ZVK1 233 aa8.69□□□□□ -1.02
TCF4-221ENST00000563888 REPS2Q8NFH8 660 aa8.69□□□□□ -1.02
TCF4-221ENST00000563888 ZNF837Q96EG3 531 aaPredicted RBP8.69□□□□□ -1.02
TCF4-221ENST00000563888 FGD4Q96M96 766 aa8.69□□□□□ -1.02
TCF4-221ENST00000563888 FRMD6Q96NE9 622 aa8.69□□□□□ -1.02
TCF4-221ENST00000563888 GSX2Q9BZM3 304 aa8.69□□□□□ -1.02
TCF4-221ENST00000563888 KATNBL1Q9H079 304 aa8.69□□□□□ -1.02
TCF4-221ENST00000563888 PIH1D3Q9NQM4 214 aaKnown RBP8.69□□□□□ -1.02
TCF4-221ENST00000563888 VTI1BQ9UEU0 232 aa8.69□□□□□ -1.02
TCF4-221ENST00000563888 CTDP1Q9Y5B0 961 aaPredicted RBP8.69□□□□□ -1.02
TCF4-221ENST00000563888 COL4A4P53420 1690 aaPredicted RBP8.69□□□□□ -1.02
TCF4-221ENST00000563888 PPFIA3O75145 1194 aa8.68□□□□□ -1.02
TCF4-221ENST00000563888 THBS1P07996 1170 aa8.68□□□□□ -1.02
TCF4-221ENST00000563888 AKR1B1P15121 316 aa8.68□□□□□ -1.02
TCF4-221ENST00000563888 CD33P20138 364 aa8.68□□□□□ -1.02
TCF4-221ENST00000563888 VAMP1P23763 118 aa8.68□□□□□ -1.02
TCF4-221ENST00000563888 SPEM2Q0P670 501 aa8.68□□□□□ -1.02
TCF4-221ENST00000563888 DDX10Q13206 875 aaKnown RBP8.68□□□□□ -1.02
TCF4-221ENST00000563888 SMAD4Q13485 552 aaKnown RBP8.68□□□□□ -1.02
TCF4-221ENST00000563888 TCTN1Q2MV58 587 aa8.68□□□□□ -1.02
TCF4-221ENST00000563888 TSNAXIP1Q2TAA8 658 aa8.68□□□□□ -1.02
TCF4-221ENST00000563888 TTC39AQ5SRH9 613 aa8.68□□□□□ -1.02
TCF4-221ENST00000563888 SV2AQ7L0J3 742 aa8.68□□□□□ -1.02
TCF4-221ENST00000563888 VWA5B2Q8N398 1253 aa8.68□□□□□ -1.02
TCF4-221ENST00000563888 MAGEB6Q8N7X4 407 aa8.68□□□□□ -1.02
TCF4-221ENST00000563888 C1orf127Q8N9H9 656 aa8.68□□□□□ -1.02
TCF4-221ENST00000563888 KCNG4Q8TDN1 519 aa8.68□□□□□ -1.02
TCF4-221ENST00000563888 BHMTQ93088 406 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms