RNA–Protein interactions for RNA: ENST00000563829.5

SCAMP2-204, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 3,162 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-204ENST00000563829 TMX4Q9H1E5 349 aaPredicted RBP13.42□□□□□ -0.26
SCAMP2-204ENST00000563829 NR2E1Q9Y466 385 aa13.42□□□□□ -0.26
SCAMP2-204ENST00000563829 RPS6KL1Q9Y6S9 549 aa13.42□□□□□ -0.26
SCAMP2-204ENST00000563829 CCDC194A0A1B0GVG4 234 aa13.42□□□□□ -0.26
SCAMP2-204ENST00000563829 CCDC188H7C350 402 aa13.42□□□□□ -0.26
SCAMP2-204ENST00000563829 CCNG1P51959 295 aa13.42□□□□□ -0.26
SCAMP2-204ENST00000563829 CENPPQ6IPU0 288 aa13.42□□□□□ -0.26
SCAMP2-204ENST00000563829 GBP7Q8N8V2 638 aaPredicted RBP13.42□□□□□ -0.26
SCAMP2-204ENST00000563829 SPATA5Q8NB90 893 aa13.42□□□□□ -0.26
SCAMP2-204ENST00000563829 ANKIB1Q9P2G1 1089 aa13.42□□□□□ -0.26
SCAMP2-204ENST00000563829 FER1L4A9Z1Z3 1794 aa13.42□□□□□ -0.26
SCAMP2-204ENST00000563829 SIPA1L3O60292 1781 aaPredicted RBP13.42□□□□□ -0.26
SCAMP2-204ENST00000563829 KCNA6P17658 529 aa13.42□□□□□ -0.26
SCAMP2-204ENST00000563829 TXNRD1Q16881 649 aa13.42□□□□□ -0.26
SCAMP2-204ENST00000563829 BLIDQ8IZY5 108 aa13.42□□□□□ -0.26
SCAMP2-204ENST00000563829 ANKRD42Q8N9B4 389 aa13.42□□□□□ -0.26
SCAMP2-204ENST00000563829 GLG1Q92896 1179 aa13.42□□□□□ -0.26
SCAMP2-204ENST00000563829 PGM2Q96G03 612 aa13.42□□□□□ -0.26
SCAMP2-204ENST00000563829 EPB41L4BQ9H329 900 aa13.42□□□□□ -0.26
SCAMP2-204ENST00000563829 PABPC3Q9H361 631 aaKnown RBP13.42□□□□□ -0.26
SCAMP2-204ENST00000563829 GREM2Q9H772 168 aa13.42□□□□□ -0.26
SCAMP2-204ENST00000563829 TCP11L1Q9NUJ3 509 aa13.42□□□□□ -0.26
SCAMP2-204ENST00000563829 CEP72Q9P209 647 aa13.42□□□□□ -0.26
SCAMP2-204ENST00000563829 WDR35Q9P2L0 1181 aa13.42□□□□□ -0.26
SCAMP2-204ENST00000563829 SNX24Q9Y343 169 aa13.42□□□□□ -0.26
SCAMP2-204ENST00000563829 CNTNAP5Q8WYK1 1306 aa13.42□□□□□ -0.26
SCAMP2-204ENST00000563829 PKD1L3Q7Z443 1732 aa13.42□□□□□ -0.26
SCAMP2-204ENST00000563829 CHD4Q14839 1912 aa13.42□□□□□ -0.26
SCAMP2-204ENST00000563829 AKAP11Q9UKA4 1901 aa13.42□□□□□ -0.26
SCAMP2-204ENST00000563829 NFAT5O94916 1531 aa13.41□□□□□ -0.26
SCAMP2-204ENST00000563829 NOL4O94818 638 aa13.41□□□□□ -0.26
SCAMP2-204ENST00000563829 FGGP02679 453 aa13.41□□□□□ -0.26
SCAMP2-204ENST00000563829 CNGA1P29973 690 aa13.41□□□□□ -0.26
SCAMP2-204ENST00000563829 KLC1Q07866 573 aa13.41□□□□□ -0.26
SCAMP2-204ENST00000563829 CUL3Q13618 768 aa13.41□□□□□ -0.26
SCAMP2-204ENST00000563829 CNGA2Q16280 664 aa13.41□□□□□ -0.26
SCAMP2-204ENST00000563829 SPATA21Q7Z572 469 aa13.41□□□□□ -0.26
SCAMP2-204ENST00000563829 GDAP1Q8TB36 358 aa13.41□□□□□ -0.26
SCAMP2-204ENST00000563829 RMDN2Q96LZ7 410 aa13.41□□□□□ -0.26
SCAMP2-204ENST00000563829 LRRC42Q9Y546 428 aa13.41□□□□□ -0.26
SCAMP2-204ENST00000563829 NMT2O60551 498 aa13.41□□□□□ -0.26
SCAMP2-204ENST00000563829 FLOT1O75955 427 aa13.41□□□□□ -0.26
SCAMP2-204ENST00000563829 PYGBP11216 843 aa13.41□□□□□ -0.26
SCAMP2-204ENST00000563829 PLS1Q14651 629 aa13.41□□□□□ -0.26
SCAMP2-204ENST00000563829 LRRC23Q53EV4 343 aaPredicted RBP13.41□□□□□ -0.26
SCAMP2-204ENST00000563829 IFNL2Q8IZJ0 200 aa13.41□□□□□ -0.26
SCAMP2-204ENST00000563829 KLHL23Q8NBE8 558 aa13.41□□□□□ -0.26
SCAMP2-204ENST00000563829 MOV10L1Q9BXT6 1211 aaKnown RBP13.41□□□□□ -0.26
SCAMP2-204ENST00000563829 TRIM7Q9C029 511 aa13.41□□□□□ -0.26
SCAMP2-204ENST00000563829 CCSER1Q9C0I3 900 aa13.41□□□□□ -0.26
SCAMP2-204ENST00000563829 SEMA4AQ9H3S1 761 aa13.41□□□□□ -0.26
SCAMP2-204ENST00000563829 SLITRK6Q9H5Y7 841 aa13.41□□□□□ -0.26
SCAMP2-204ENST00000563829 FBXO3Q9UK99 471 aa13.41□□□□□ -0.26
SCAMP2-204ENST00000563829 SLIT3O75094 1523 aa13.41□□□□□ -0.26
SCAMP2-204ENST00000563829 NPTXRO95502 500 aa13.4□□□□□ -0.26
SCAMP2-204ENST00000563829 GNAZP19086 355 aa13.4□□□□□ -0.26
SCAMP2-204ENST00000563829 SESN3P58005 492 aa13.4□□□□□ -0.26
SCAMP2-204ENST00000563829 ASRGL1Q7L266 308 aa13.4□□□□□ -0.26
SCAMP2-204ENST00000563829 ATP8B4Q8TF62 1192 aa13.4□□□□□ -0.26
SCAMP2-204ENST00000563829 PAIP2Q9BPZ3 127 aaKnown RBP13.4□□□□□ -0.26
SCAMP2-204ENST00000563829 RNPEPL1Q9HAU8 725 aa13.4□□□□□ -0.26
SCAMP2-204ENST00000563829 MYH4Q9Y623 1939 aa13.4□□□□□ -0.26
SCAMP2-204ENST00000563829 RIC1Q4ADV7 1423 aa13.4□□□□□ -0.26
SCAMP2-204ENST00000563829 GPR75-ASB3A0A0A6YYF3 556 aa13.4□□□□□ -0.26
SCAMP2-204ENST00000563829 ATP6V1C1P21283 382 aa13.4□□□□□ -0.26
SCAMP2-204ENST00000563829 FGFR4P22455 802 aa13.4□□□□□ -0.26
SCAMP2-204ENST00000563829 CALB2P22676 271 aa13.4□□□□□ -0.26
SCAMP2-204ENST00000563829 SP100P23497 879 aaPredicted RBP13.4□□□□□ -0.26
SCAMP2-204ENST00000563829 ARID4AP29374 1257 aaPredicted RBP13.4□□□□□ -0.26
SCAMP2-204ENST00000563829 RASGRF1Q13972 1273 aa13.4□□□□□ -0.26
SCAMP2-204ENST00000563829 GLIS3Q8NEA6 775 aa13.4□□□□□ -0.26
SCAMP2-204ENST00000563829 FBXO25Q8TCJ0 367 aa13.4□□□□□ -0.26
SCAMP2-204ENST00000563829 TMEM237Q96Q45 408 aa13.4□□□□□ -0.26
SCAMP2-204ENST00000563829 NUDCD1Q96RS6 583 aa13.4□□□□□ -0.26
SCAMP2-204ENST00000563829 ARL2BPQ9Y2Y0 163 aa13.4□□□□□ -0.26
SCAMP2-204ENST00000563829 ASB3Q9Y575 518 aa13.4□□□□□ -0.26
SCAMP2-204ENST00000563829 LMTK3Q96Q04 1460 aa13.4□□□□□ -0.26
SCAMP2-204ENST00000563829 CES2O00748 559 aa13.4□□□□□ -0.26
SCAMP2-204ENST00000563829 FGFR1OPO95684 399 aaKnown RBP13.4□□□□□ -0.26
SCAMP2-204ENST00000563829 ASIC2Q16515 512 aa13.4□□□□□ -0.26
SCAMP2-204ENST00000563829 C6orf118Q5T5N4 469 aa13.4□□□□□ -0.26
SCAMP2-204ENST00000563829 FAM81AQ8TBF8 368 aa13.4□□□□□ -0.26
SCAMP2-204ENST00000563829 UCMAQ8WVF2 138 aa13.4□□□□□ -0.26
SCAMP2-204ENST00000563829 UTP4Q969X6 686 aaKnown RBP13.4□□□□□ -0.26
SCAMP2-204ENST00000563829 RBM41Q96IZ5 413 aaKnown RBP13.4□□□□□ -0.26
SCAMP2-204ENST00000563829 RXFP1Q9HBX9 757 aa13.4□□□□□ -0.26
SCAMP2-204ENST00000563829 KCNK9Q9NPC2 374 aa13.4□□□□□ -0.26
SCAMP2-204ENST00000563829 PCMTD2Q9NV79 361 aa13.4□□□□□ -0.26
SCAMP2-204ENST00000563829 ABCF2Q9UG63 623 aa13.4□□□□□ -0.26
SCAMP2-204ENST00000563829 FOXO6A8MYZ6 492 aa13.39□□□□□ -0.27
SCAMP2-204ENST00000563829 BHMG1C9JSJ3 638 aaPredicted RBP13.39□□□□□ -0.27
SCAMP2-204ENST00000563829 PDE8BO95263 885 aa13.39□□□□□ -0.27
SCAMP2-204ENST00000563829 OAS1P00973 400 aaKnown RBP13.39□□□□□ -0.27
SCAMP2-204ENST00000563829 AGTP01019 485 aa13.39□□□□□ -0.27
SCAMP2-204ENST00000563829 NUDT17P0C025 328 aa13.39□□□□□ -0.27
SCAMP2-204ENST00000563829 CREB1P16220 341 aa13.39□□□□□ -0.27
SCAMP2-204ENST00000563829 PTK2Q05397 1052 aa13.39□□□□□ -0.27
SCAMP2-204ENST00000563829 MUM1Q2TAK8 710 aa13.39□□□□□ -0.27
SCAMP2-204ENST00000563829 LBHD1Q9BQE6 289 aaPredicted RBP13.39□□□□□ -0.27
SCAMP2-204ENST00000563829 CHCHD3Q9NX63 227 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms