RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 ZKSCAN4Q969J2 545 aaPredicted RBP11.38□□□□□ -0.59
RNF40-204ENST00000563683 CCPG1Q9ULG6 757 aa11.38□□□□□ -0.59
RNF40-204ENST00000563683 ODF2LQ9ULJ1 636 aa11.38□□□□□ -0.59
RNF40-204ENST00000563683 KIF13AQ9H1H9 1805 aa11.38□□□□□ -0.59
RNF40-204ENST00000563683 SIPA1L3O60292 1781 aaPredicted RBP11.38□□□□□ -0.59
RNF40-204ENST00000563683 SLC37A4O43826 429 aa11.38□□□□□ -0.59
RNF40-204ENST00000563683 PPP1R37O75864 691 aa11.38□□□□□ -0.59
RNF40-204ENST00000563683 SERPING1P05155 500 aa11.38□□□□□ -0.59
RNF40-204ENST00000563683 PLEKP08567 350 aaPredicted RBP11.38□□□□□ -0.59
RNF40-204ENST00000563683 EZRP15311 586 aaKnown RBP11.38□□□□□ -0.59
RNF40-204ENST00000563683 PLCB3Q01970 1234 aa11.38□□□□□ -0.59
RNF40-204ENST00000563683 ALKBH5Q6P6C2 394 aaKnown RBP11.38□□□□□ -0.59
RNF40-204ENST00000563683 CREG2Q8IUH2 290 aa11.38□□□□□ -0.59
RNF40-204ENST00000563683 ZNF473Q8WTR7 871 aaKnown RBP11.38□□□□□ -0.59
RNF40-204ENST00000563683 PURBQ96QR8 312 aaKnown RBP11.38□□□□□ -0.59
RNF40-204ENST00000563683 C7orf25Q9BPX7 421 aa11.38□□□□□ -0.59
RNF40-204ENST00000563683 POLLQ9UGP5 575 aa11.38□□□□□ -0.59
RNF40-204ENST00000563683 STK24Q9Y6E0 443 aa11.38□□□□□ -0.59
RNF40-204ENST00000563683 MYH8P13535 1937 aa11.38□□□□□ -0.59
RNF40-204ENST00000563683 ADRA2BP18089 450 aa11.38□□□□□ -0.59
RNF40-204ENST00000563683 FAM102BQ5T8I3 360 aa11.38□□□□□ -0.59
RNF40-204ENST00000563683 WDR59Q6PJI9 974 aa11.38□□□□□ -0.59
RNF40-204ENST00000563683 UHMK1Q8TAS1 419 aaKnown RBP11.38□□□□□ -0.59
RNF40-204ENST00000563683 CNKSR1Q969H4 720 aa11.38□□□□□ -0.59
RNF40-204ENST00000563683 CCDC114Q96M63 670 aa11.38□□□□□ -0.59
RNF40-204ENST00000563683 FNBP1Q96RU3 617 aa11.38□□□□□ -0.59
RNF40-204ENST00000563683 MCM8Q9UJA3 840 aa11.38□□□□□ -0.59
RNF40-204ENST00000563683 ESYT3A0FGR9 886 aa11.37□□□□□ -0.59
RNF40-204ENST00000563683 PALMO75781 387 aa11.37□□□□□ -0.59
RNF40-204ENST00000563683 NR1D1P20393 614 aa11.37□□□□□ -0.59
RNF40-204ENST00000563683 CDK17Q00537 523 aa11.37□□□□□ -0.59
RNF40-204ENST00000563683 SNCBQ16143 134 aa11.37□□□□□ -0.59
RNF40-204ENST00000563683 SEL1L2Q5TEA6 688 aa11.37□□□□□ -0.59
RNF40-204ENST00000563683 TMEM179Q6ZVK1 233 aa11.37□□□□□ -0.59
RNF40-204ENST00000563683 LACRTQ9GZZ8 138 aa11.37□□□□□ -0.59
RNF40-204ENST00000563683 JMJD4Q9H9V9 463 aa11.37□□□□□ -0.59
RNF40-204ENST00000563683 DMGDHQ9UI17 866 aaKnown RBP11.37□□□□□ -0.59
RNF40-204ENST00000563683 PDS5AQ29RF7 1337 aaKnown RBP11.37□□□□□ -0.59
RNF40-204ENST00000563683 ATRNO75882 1429 aa11.37□□□□□ -0.59
RNF40-204ENST00000563683 HMGB1P1B2RPK0 211 aaPredicted RBP11.37□□□□□ -0.59
RNF40-204ENST00000563683 KRT71Q3SY84 523 aa11.37□□□□□ -0.59
RNF40-204ENST00000563683 GRIPAP1Q4V328 841 aa11.37□□□□□ -0.59
RNF40-204ENST00000563683 XKR9Q5GH70 373 aa11.37□□□□□ -0.59
RNF40-204ENST00000563683 GSTA5Q7RTV2 222 aa11.37□□□□□ -0.59
RNF40-204ENST00000563683 LRRC45Q96CN5 670 aa11.37□□□□□ -0.59
RNF40-204ENST00000563683 ZIM3Q96PE6 472 aa11.37□□□□□ -0.59
RNF40-204ENST00000563683 TEKT3Q9BXF9 490 aa11.37□□□□□ -0.59
RNF40-204ENST00000563683 SMARCAL1Q9NZC9 954 aa11.37□□□□□ -0.59
RNF40-204ENST00000563683 RGL1Q9NZL6 768 aa11.37□□□□□ -0.59
RNF40-204ENST00000563683 RNF14Q9UBS8 474 aa11.37□□□□□ -0.59
RNF40-204ENST00000563683 ANKRD62A6NC57 917 aa11.37□□□□□ -0.59
RNF40-204ENST00000563683 CTNNA1P35221 906 aaKnown RBP11.37□□□□□ -0.59
RNF40-204ENST00000563683 PTGISQ16647 500 aa11.37□□□□□ -0.59
RNF40-204ENST00000563683 EMC10Q5UCC4 262 aa11.37□□□□□ -0.59
RNF40-204ENST00000563683 CDC42EP5Q6NZY7 148 aa11.37□□□□□ -0.59
RNF40-204ENST00000563683 PODNQ7Z5L7 613 aa11.37□□□□□ -0.59
RNF40-204ENST00000563683 NLRP14Q86W24 1093 aa11.37□□□□□ -0.59
RNF40-204ENST00000563683 SP8Q8IXZ3 490 aa11.37□□□□□ -0.59
RNF40-204ENST00000563683 SYCE1Q8N0S2 351 aa11.37□□□□□ -0.59
RNF40-204ENST00000563683 C3orf20Q8ND61 904 aa11.37□□□□□ -0.59
RNF40-204ENST00000563683 N4BP2L2Q92802 583 aaPredicted RBP11.37□□□□□ -0.59
RNF40-204ENST00000563683 MASTLQ96GX5 879 aa11.37□□□□□ -0.59
RNF40-204ENST00000563683 PAIP2Q9BPZ3 127 aaKnown RBP11.37□□□□□ -0.59
RNF40-204ENST00000563683 AP1M1Q9BXS5 423 aa11.37□□□□□ -0.59
RNF40-204ENST00000563683 CD248Q9HCU0 757 aa11.37□□□□□ -0.59
RNF40-204ENST00000563683 PPANQ9NQ55 473 aaKnown RBP11.37□□□□□ -0.59
RNF40-204ENST00000563683 KBTBD4Q9NVX7 518 aa11.37□□□□□ -0.59
RNF40-204ENST00000563683 MTUS1Q9ULD2 1270 aa11.37□□□□□ -0.59
RNF40-204ENST00000563683 BCL9LQ86UU0 1499 aa11.36□□□□□ -0.59
RNF40-204ENST00000563683 A0A1B0GUA9 196 aa11.36□□□□□ -0.59
RNF40-204ENST00000563683 DLATP10515 647 aaKnown RBP11.36□□□□□ -0.59
RNF40-204ENST00000563683 PSMC2P35998 433 aaKnown RBP11.36□□□□□ -0.59
RNF40-204ENST00000563683 NFIAQ12857 509 aa11.36□□□□□ -0.59
RNF40-204ENST00000563683 CALCOCO2Q13137 446 aa11.36□□□□□ -0.59
RNF40-204ENST00000563683 SEMA3FQ13275 785 aa11.36□□□□□ -0.59
RNF40-204ENST00000563683 PDIA5Q14554 519 aa11.36□□□□□ -0.59
RNF40-204ENST00000563683 AOC3Q16853 763 aa11.36□□□□□ -0.59
RNF40-204ENST00000563683 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.36□□□□□ -0.59
RNF40-204ENST00000563683 DPH6Q7L8W6 267 aa11.36□□□□□ -0.59
RNF40-204ENST00000563683 C1orf131Q8NDD1 294 aaKnown RBP11.36□□□□□ -0.59
RNF40-204ENST00000563683 CCT8L2Q96SF2 557 aa11.36□□□□□ -0.59
RNF40-204ENST00000563683 RTFDC1Q9BY42 306 aaPredicted RBP11.36□□□□□ -0.59
RNF40-204ENST00000563683 PHRF1Q9P1Y6 1649 aaKnown RBP11.36□□□□□ -0.59
RNF40-204ENST00000563683 FAM107AO95990 144 aa11.36□□□□□ -0.59
RNF40-204ENST00000563683 SATB1Q01826 763 aa11.36□□□□□ -0.59
RNF40-204ENST00000563683 IFT88Q13099 833 aa11.36□□□□□ -0.59
RNF40-204ENST00000563683 CCDC105Q8IYK2 499 aa11.36□□□□□ -0.59
RNF40-204ENST00000563683 SUPT20HQ8NEM7 779 aa11.36□□□□□ -0.59
RNF40-204ENST00000563683 ZNF507Q8TCN5 953 aa11.36□□□□□ -0.59
RNF40-204ENST00000563683 RNPC3Q96LT9 517 aaKnown RBP11.36□□□□□ -0.59
RNF40-204ENST00000563683 OSBPL9Q96SU4 736 aa11.36□□□□□ -0.59
RNF40-204ENST00000563683 PARVGQ9HBI0 331 aa11.36□□□□□ -0.59
RNF40-204ENST00000563683 MTRF1LQ9UGC7 380 aaKnown RBP11.36□□□□□ -0.59
RNF40-204ENST00000563683 NFU1Q9UMS0 254 aa11.36□□□□□ -0.59
RNF40-204ENST00000563683 C5P01031 1676 aa11.36□□□□□ -0.59
RNF40-204ENST00000563683 ECM2O94769 699 aaPredicted RBP11.36□□□□□ -0.59
RNF40-204ENST00000563683 MDH1P40925 334 aaKnown RBP11.36□□□□□ -0.59
RNF40-204ENST00000563683 TTI2Q6NXR4 508 aa11.36□□□□□ -0.59
RNF40-204ENST00000563683 FMNL3Q8IVF7 1028 aa11.36□□□□□ -0.59
RNF40-204ENST00000563683 CD302Q8IX05 232 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms