RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.08■□□□□ 0.97
SMPD3-203ENST00000563226 ZMYM2Q9UBW7 1377 aa21.08■□□□□ 0.97
SMPD3-203ENST00000563226 PDXKO00764 312 aa21.08■□□□□ 0.96
SMPD3-203ENST00000563226 DDNO94850 711 aaPredicted RBP21.08■□□□□ 0.96
SMPD3-203ENST00000563226 MAP3K9P80192 1104 aa21.08■□□□□ 0.96
SMPD3-203ENST00000563226 APBA1Q02410 837 aa21.08■□□□□ 0.96
SMPD3-203ENST00000563226 KSR1Q8IVT5 923 aa21.08■□□□□ 0.96
SMPD3-203ENST00000563226 SLC35F6Q8N357 371 aa21.08■□□□□ 0.96
SMPD3-203ENST00000563226 CARD6Q9BX69 1037 aa21.08■□□□□ 0.96
SMPD3-203ENST00000563226 PARVGQ9HBI0 331 aa21.08■□□□□ 0.96
SMPD3-203ENST00000563226 ZNF214Q9UL59 606 aaPredicted RBP21.08■□□□□ 0.96
SMPD3-203ENST00000563226 MRFAP1Q9Y605 127 aa21.08■□□□□ 0.96
SMPD3-203ENST00000563226 LRRC53A6NM62 1247 aa21.07■□□□□ 0.96
SMPD3-203ENST00000563226 RRP9O43818 475 aaKnown RBP21.07■□□□□ 0.96
SMPD3-203ENST00000563226 ATP9AO75110 1047 aa21.07■□□□□ 0.96
SMPD3-203ENST00000563226 FDX1P10109 184 aa21.07■□□□□ 0.96
SMPD3-203ENST00000563226 HSP90AA2PQ14568 343 aaPredicted RBP21.07■□□□□ 0.96
SMPD3-203ENST00000563226 SAMD3Q8N6K7 520 aa21.07■□□□□ 0.96
SMPD3-203ENST00000563226 IQCDQ96DY2 449 aa21.07■□□□□ 0.96
SMPD3-203ENST00000563226 CRACR2AQ9BSW2 395 aa21.07■□□□□ 0.96
SMPD3-203ENST00000563226 TYW1Q9NV66 732 aaKnown RBP21.07■□□□□ 0.96
SMPD3-203ENST00000563226 ADAMTS5Q9UNA0 930 aa21.07■□□□□ 0.96
SMPD3-203ENST00000563226 PLAGL2Q9UPG8 496 aa21.07■□□□□ 0.96
SMPD3-203ENST00000563226 PPP2R3BQ9Y5P8 575 aa21.07■□□□□ 0.96
SMPD3-203ENST00000563226 CLIC2O15247 247 aa21.06■□□□□ 0.96
SMPD3-203ENST00000563226 TGFB1I1O43294 461 aa21.06■□□□□ 0.96
SMPD3-203ENST00000563226 CALUO43852 315 aaPredicted RBP21.06■□□□□ 0.96
SMPD3-203ENST00000563226 NOL4O94818 638 aa21.06■□□□□ 0.96
SMPD3-203ENST00000563226 HNRNPH3P31942 346 aaKnown RBP21.06■□□□□ 0.96
SMPD3-203ENST00000563226 ZNF131P52739 623 aa21.06■□□□□ 0.96
SMPD3-203ENST00000563226 TMEM132BQ14DG7 1078 aa21.06■□□□□ 0.96
SMPD3-203ENST00000563226 ERCC6LQ2NKX8 1250 aa21.06■□□□□ 0.96
SMPD3-203ENST00000563226 ARHGEF16Q5VV41 709 aa21.06■□□□□ 0.96
SMPD3-203ENST00000563226 RRAGAQ7L523 313 aa21.06■□□□□ 0.96
SMPD3-203ENST00000563226 NEK11Q8NG66 645 aa21.06■□□□□ 0.96
SMPD3-203ENST00000563226 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.06■□□□□ 0.96
SMPD3-203ENST00000563226 NEK9Q8TD19 979 aa21.06■□□□□ 0.96
SMPD3-203ENST00000563226 ARHGAP20Q9P2F6 1191 aa21.06■□□□□ 0.96
SMPD3-203ENST00000563226 KIAA1217Q5T5P2 1943 aa21.06■□□□□ 0.96
SMPD3-203ENST00000563226 ARHGEF35A5YM69 484 aa21.06■□□□□ 0.96
SMPD3-203ENST00000563226 C19orf81C9J6K1 198 aa21.06■□□□□ 0.96
SMPD3-203ENST00000563226 AKAP3O75969 853 aa21.06■□□□□ 0.96
SMPD3-203ENST00000563226 NR3C1P04150 777 aa21.06■□□□□ 0.96
SMPD3-203ENST00000563226 CDK17Q00537 523 aa21.06■□□□□ 0.96
SMPD3-203ENST00000563226 NOL9Q5SY16 702 aaKnown RBP21.06■□□□□ 0.96
SMPD3-203ENST00000563226 DAW1Q8N136 415 aa21.06■□□□□ 0.96
SMPD3-203ENST00000563226 LSM14BQ9BX40 385 aaKnown RBP21.06■□□□□ 0.96
SMPD3-203ENST00000563226 AFG3L2Q9Y4W6 797 aa21.06■□□□□ 0.96
SMPD3-203ENST00000563226 PTPRFP10586 1907 aa21.05■□□□□ 0.96
SMPD3-203ENST00000563226 OTOFQ9HC10 1997 aa21.05■□□□□ 0.96
SMPD3-203ENST00000563226 RCCD1A6NED2 376 aa21.05■□□□□ 0.96
SMPD3-203ENST00000563226 USP2O75604 605 aaPredicted RBP21.05■□□□□ 0.96
SMPD3-203ENST00000563226 P4HBP07237 508 aaKnown RBP21.05■□□□□ 0.96
SMPD3-203ENST00000563226 CYLC1P35663 651 aaPredicted RBP21.05■□□□□ 0.96
SMPD3-203ENST00000563226 CASP4P49662 377 aa21.05■□□□□ 0.96
SMPD3-203ENST00000563226 MAPK7Q13164 816 aa21.05■□□□□ 0.96
SMPD3-203ENST00000563226 COG2Q14746 738 aa21.05■□□□□ 0.96
SMPD3-203ENST00000563226 CATSPERGQ6ZRH7 1159 aa21.05■□□□□ 0.96
SMPD3-203ENST00000563226 PNMA2Q9UL42 364 aa21.05■□□□□ 0.96
SMPD3-203ENST00000563226 SAMM50Q9Y512 469 aa21.05■□□□□ 0.96
SMPD3-203ENST00000563226 TESPA1A2RU30 521 aaPredicted RBP21.05■□□□□ 0.96
SMPD3-203ENST00000563226 EIF3CLB5ME19 914 aaKnown RBP21.05■□□□□ 0.96
SMPD3-203ENST00000563226 ZNF263O14978 683 aa21.05■□□□□ 0.96
SMPD3-203ENST00000563226 EIF3DO15371 548 aaKnown RBP eCLIP21.05■□□□□ 0.96
SMPD3-203ENST00000563226 HIP1RO75146 1068 aa21.05■□□□□ 0.96
SMPD3-203ENST00000563226 CYP27A1Q02318 531 aa21.05■□□□□ 0.96
SMPD3-203ENST00000563226 KCNH2Q12809 1159 aa21.05■□□□□ 0.96
SMPD3-203ENST00000563226 UGCGQ16739 394 aa21.05■□□□□ 0.96
SMPD3-203ENST00000563226 PDXDC1Q6P996 788 aa21.05■□□□□ 0.96
SMPD3-203ENST00000563226 CCDC170Q8IYT3 715 aa21.05■□□□□ 0.96
SMPD3-203ENST00000563226 PDCL2Q8N4E4 241 aa21.05■□□□□ 0.96
SMPD3-203ENST00000563226 EIF3CQ99613 913 aaKnown RBP21.05■□□□□ 0.96
SMPD3-203ENST00000563226 FHDC1Q9C0D6 1143 aaPredicted RBP21.05■□□□□ 0.96
SMPD3-203ENST00000563226 ZSWIM4Q9H7M6 989 aa21.05■□□□□ 0.96
SMPD3-203ENST00000563226 NLRC4Q9NPP4 1024 aa21.05■□□□□ 0.96
SMPD3-203ENST00000563226 GUCA1BQ9UMX6 200 aa21.05■□□□□ 0.96
SMPD3-203ENST00000563226 LCTP09848 1927 aa21.04■□□□□ 0.96
SMPD3-203ENST00000563226 DOCK5Q9H7D0 1870 aa21.04■□□□□ 0.96
SMPD3-203ENST00000563226 SRCAPQ6ZRS2 3230 aa21.04■□□□□ 0.96
SMPD3-203ENST00000563226 TMEM150BA6NC51 233 aa21.04■□□□□ 0.96
SMPD3-203ENST00000563226 GUCY2CP25092 1073 aa21.04■□□□□ 0.96
SMPD3-203ENST00000563226 PADI6Q6TGC4 694 aa21.04■□□□□ 0.96
SMPD3-203ENST00000563226 MAEAQ7L5Y9 396 aa21.04■□□□□ 0.96
SMPD3-203ENST00000563226 FRMD5Q7Z6J6 570 aa21.04■□□□□ 0.96
SMPD3-203ENST00000563226 SH2D3AQ9BRG2 576 aa21.04■□□□□ 0.96
SMPD3-203ENST00000563226 KCND2Q9NZV8 630 aa21.04■□□□□ 0.96
SMPD3-203ENST00000563226 FAM184BQ9ULE4 1060 aa21.04■□□□□ 0.96
SMPD3-203ENST00000563226 ODF2LQ9ULJ1 636 aa21.04■□□□□ 0.96
SMPD3-203ENST00000563226 WDR81Q562E7 1941 aa21.04■□□□□ 0.96
SMPD3-203ENST00000563226 PAPPA2Q9BXP8 1791 aa21.04■□□□□ 0.96
SMPD3-203ENST00000563226 TADA3O75528 432 aa21.03■□□□□ 0.96
SMPD3-203ENST00000563226 CCNE2O96020 404 aa21.03■□□□□ 0.96
SMPD3-203ENST00000563226 SUPT20HL1Q3ZLR7 823 aa21.03■□□□□ 0.96
SMPD3-203ENST00000563226 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.03■□□□□ 0.96
SMPD3-203ENST00000563226 ZNF720Q7Z2F6 126 aa21.03■□□□□ 0.96
SMPD3-203ENST00000563226 FAM178BQ8IXR5 827 aa21.03■□□□□ 0.96
SMPD3-203ENST00000563226 MAP7D2Q96T17 732 aa21.03■□□□□ 0.96
SMPD3-203ENST00000563226 ARID3AQ99856 593 aa21.03■□□□□ 0.96
SMPD3-203ENST00000563226 LACRTQ9GZZ8 138 aa21.03■□□□□ 0.96
SMPD3-203ENST00000563226 PDCL3Q9H2J4 239 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 163.6 ms