RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 GUCY1B3Q02153 619 aa7.01□□□□□ -1.29
CNOT1-204ENST00000563130 KIAA0753Q2KHM9 967 aa7.01□□□□□ -1.29
CNOT1-204ENST00000563130 SH3RF1Q7Z6J0 888 aa7.01□□□□□ -1.29
CNOT1-204ENST00000563130 ETNPPLQ8TBG4 499 aa7.01□□□□□ -1.29
CNOT1-204ENST00000563130 SLC5A5Q92911 643 aa7.01□□□□□ -1.29
CNOT1-204ENST00000563130 TRIM43Q96BQ3 446 aaPredicted RBP7.01□□□□□ -1.29
CNOT1-204ENST00000563130 INTS4Q96HW7 963 aaKnown RBP7.01□□□□□ -1.29
CNOT1-204ENST00000563130 PCYT2Q99447 389 aa7.01□□□□□ -1.29
CNOT1-204ENST00000563130 RIT2Q99578 217 aa7.01□□□□□ -1.29
CNOT1-204ENST00000563130 SDF4Q9BRK5 362 aa7.01□□□□□ -1.29
CNOT1-204ENST00000563130 ZNF577Q9BSK1 485 aa7.01□□□□□ -1.29
CNOT1-204ENST00000563130 PRO3102Q9H379 93 aa7.01□□□□□ -1.29
CNOT1-204ENST00000563130 KCNMB3Q9NPA1 279 aa7.01□□□□□ -1.29
CNOT1-204ENST00000563130 EMSYQ7Z589 1322 aa7.01□□□□□ -1.29
CNOT1-204ENST00000563130 K7ELQ4 463 aaPredicted RBP7.01□□□□□ -1.29
CNOT1-204ENST00000563130 WNT7AO00755 349 aa7.01□□□□□ -1.29
CNOT1-204ENST00000563130 SLC37A4O43826 429 aa7.01□□□□□ -1.29
CNOT1-204ENST00000563130 PSMD10O75832 226 aa7.01□□□□□ -1.29
CNOT1-204ENST00000563130 ITGB8P26012 769 aa7.01□□□□□ -1.29
CNOT1-204ENST00000563130 ACTR2P61160 394 aa7.01□□□□□ -1.29
CNOT1-204ENST00000563130 SP4Q02446 784 aa7.01□□□□□ -1.29
CNOT1-204ENST00000563130 SAFBQ15424 915 aaKnown RBP eCLIP7.01□□□□□ -1.29
CNOT1-204ENST00000563130 LETM2Q2VYF4 491 aa7.01□□□□□ -1.29
CNOT1-204ENST00000563130 ABHD15Q6UXT9 468 aa7.01□□□□□ -1.29
CNOT1-204ENST00000563130 TRIM50Q86XT4 487 aa7.01□□□□□ -1.29
CNOT1-204ENST00000563130 NAP1L4Q99733 375 aaKnown RBP7.01□□□□□ -1.29
CNOT1-204ENST00000563130 GDF15Q99988 308 aa7.01□□□□□ -1.29
CNOT1-204ENST00000563130 DDX25Q9UHL0 483 aaKnown RBP7.01□□□□□ -1.29
CNOT1-204ENST00000563130 GTF2IRD1Q9UHL9 959 aa7.01□□□□□ -1.29
CNOT1-204ENST00000563130 ZMYND8Q9ULU4 1186 aaPredicted RBP7.01□□□□□ -1.29
CNOT1-204ENST00000563130 KIF3AQ9Y496 699 aa7.01□□□□□ -1.29
CNOT1-204ENST00000563130 KIF28PB7ZC32 967 aa7□□□□□ -1.29
CNOT1-204ENST00000563130 TBX3O15119 743 aa7□□□□□ -1.29
CNOT1-204ENST00000563130 SYN1P17600 705 aa7□□□□□ -1.29
CNOT1-204ENST00000563130 CLCN1P35523 988 aa7□□□□□ -1.29
CNOT1-204ENST00000563130 ADAM17P78536 824 aa7□□□□□ -1.29
CNOT1-204ENST00000563130 KRT76Q01546 638 aa7□□□□□ -1.29
CNOT1-204ENST00000563130 ZNF746Q6NUN9 644 aaPredicted RBP7□□□□□ -1.29
CNOT1-204ENST00000563130 PLPPR4Q7Z2D5 763 aa7□□□□□ -1.29
CNOT1-204ENST00000563130 NOSTRINQ8IVI9 506 aa7□□□□□ -1.29
CNOT1-204ENST00000563130 SMAP1Q8IYB5 467 aaPredicted RBP7□□□□□ -1.29
CNOT1-204ENST00000563130 AFAP1L1Q8TED9 768 aa7□□□□□ -1.29
CNOT1-204ENST00000563130 PPP1R13LQ8WUF5 828 aa7□□□□□ -1.29
CNOT1-204ENST00000563130 NLRP7Q8WX94 980 aa7□□□□□ -1.29
CNOT1-204ENST00000563130 HAS1Q92839 578 aa7□□□□□ -1.29
CNOT1-204ENST00000563130 TRPV6Q9H1D0 765 aa7□□□□□ -1.29
CNOT1-204ENST00000563130 SLC24A3Q9HC58 644 aa7□□□□□ -1.29
CNOT1-204ENST00000563130 TRMT13Q9NUP7 481 aaKnown RBP7□□□□□ -1.29
CNOT1-204ENST00000563130 HDAC6Q9UBN7 1215 aa7□□□□□ -1.29
CNOT1-204ENST00000563130 SMC3Q9UQE7 1217 aa7□□□□□ -1.29
CNOT1-204ENST00000563130 CEP290O15078 2479 aa7□□□□□ -1.29
CNOT1-204ENST00000563130 RANBP2P49792 3224 aaKnown RBP7□□□□□ -1.29
CNOT1-204ENST00000563130 TLR3O15455 904 aaKnown RBP6.99□□□□□ -1.29
CNOT1-204ENST00000563130 CCNT1O60563 726 aaKnown RBP6.99□□□□□ -1.29
CNOT1-204ENST00000563130 SUPT20HL2P0C7V6 817 aa6.99□□□□□ -1.29
CNOT1-204ENST00000563130 PDIA4P13667 645 aaKnown RBP6.99□□□□□ -1.29
CNOT1-204ENST00000563130 MDM2Q00987 491 aaPredicted RBP6.99□□□□□ -1.29
CNOT1-204ENST00000563130 GDF6Q6KF10 455 aaPredicted RBP6.99□□□□□ -1.29
CNOT1-204ENST00000563130 GJA10Q969M2 543 aa6.99□□□□□ -1.29
CNOT1-204ENST00000563130 FAM20AQ96MK3 541 aa6.99□□□□□ -1.29
CNOT1-204ENST00000563130 UIMC1Q96RL1 719 aa6.99□□□□□ -1.29
CNOT1-204ENST00000563130 PRR14Q9BWN1 585 aa6.99□□□□□ -1.29
CNOT1-204ENST00000563130 RNPEPQ9H4A4 650 aa6.99□□□□□ -1.29
CNOT1-204ENST00000563130 SMARCAD1Q9H4L7 1026 aa6.99□□□□□ -1.29
CNOT1-204ENST00000563130 TMEM39AQ9NV64 488 aa6.99□□□□□ -1.29
CNOT1-204ENST00000563130 ERAP1Q9NZ08 941 aa6.99□□□□□ -1.29
CNOT1-204ENST00000563130 ZNF215Q9UL58 517 aaPredicted RBP6.99□□□□□ -1.29
CNOT1-204ENST00000563130 LTBP2Q14767 1821 aa6.99□□□□□ -1.29
CNOT1-204ENST00000563130 DDX39AO00148 427 aaKnown RBP6.99□□□□□ -1.29
CNOT1-204ENST00000563130 TRIM66O15016 1216 aa6.99□□□□□ -1.29
CNOT1-204ENST00000563130 TIMP1P01033 207 aa6.99□□□□□ -1.29
CNOT1-204ENST00000563130 SMIM10L2AP0DMW4 78 aa6.99□□□□□ -1.29
CNOT1-204ENST00000563130 SMIM10L2BP0DMW5 78 aa6.99□□□□□ -1.29
CNOT1-204ENST00000563130 BMP8BP34820 402 aa6.99□□□□□ -1.29
CNOT1-204ENST00000563130 MAGEA10P43363 369 aaPredicted RBP6.99□□□□□ -1.29
CNOT1-204ENST00000563130 TRAPPC10P48553 1259 aa6.99□□□□□ -1.29
CNOT1-204ENST00000563130 SLC26A2P50443 739 aa6.99□□□□□ -1.29
CNOT1-204ENST00000563130 STAT5BP51692 787 aa6.99□□□□□ -1.29
CNOT1-204ENST00000563130 RBL2Q08999 1139 aa6.99□□□□□ -1.29
CNOT1-204ENST00000563130 SPIRE1Q08AE8 756 aa6.99□□□□□ -1.29
CNOT1-204ENST00000563130 AMHR2Q16671 573 aa6.99□□□□□ -1.29
CNOT1-204ENST00000563130 FAM47CQ5HY64 1035 aa6.99□□□□□ -1.29
CNOT1-204ENST00000563130 UTP14CQ5TAP6 766 aaKnown RBP6.99□□□□□ -1.29
CNOT1-204ENST00000563130 LRCH2Q5VUJ6 765 aa6.99□□□□□ -1.29
CNOT1-204ENST00000563130 CCDC60Q8IWA6 550 aaPredicted RBP6.99□□□□□ -1.29
CNOT1-204ENST00000563130 C7orf31Q8N865 590 aa6.99□□□□□ -1.29
CNOT1-204ENST00000563130 NOC4LQ9BVI4 516 aaKnown RBP6.99□□□□□ -1.29
CNOT1-204ENST00000563130 PRDM5Q9NQX1 630 aaPredicted RBP6.99□□□□□ -1.29
CNOT1-204ENST00000563130 PRKAG2Q9UGJ0 569 aa6.99□□□□□ -1.29
CNOT1-204ENST00000563130 VAV3Q9UKW4 847 aa6.99□□□□□ -1.29
CNOT1-204ENST00000563130 PCDHA10Q9Y5I2 948 aa6.99□□□□□ -1.29
CNOT1-204ENST00000563130 MAFBQ9Y5Q3 323 aaPredicted RBP6.99□□□□□ -1.29
CNOT1-204ENST00000563130 NRCAMQ92823 1304 aa6.98□□□□□ -1.29
CNOT1-204ENST00000563130 WDR64B1ANS9 1081 aa6.98□□□□□ -1.29
CNOT1-204ENST00000563130 GAS7O60861 476 aa6.98□□□□□ -1.29
CNOT1-204ENST00000563130 ATP4AP20648 1035 aa6.98□□□□□ -1.29
CNOT1-204ENST00000563130 SFNP31947 248 aa6.98□□□□□ -1.29
CNOT1-204ENST00000563130 TOB1P50616 345 aaPredicted RBP6.98□□□□□ -1.29
CNOT1-204ENST00000563130 PPP2R5CQ13362 524 aa6.98□□□□□ -1.29
CNOT1-204ENST00000563130 ORC2Q13416 577 aaPredicted RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms