RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, humanhuman

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-208ENST00000563092 KLRF2D3W0D1 207 aa9.63□□□□□ -0.87
CKLF-208ENST00000563092 NOP56O00567 594 aaKnown RBP9.63□□□□□ -0.87
CKLF-208ENST00000563092 CYTH3O43739 400 aa9.63□□□□□ -0.87
CKLF-208ENST00000563092 PTPN21Q16825 1174 aa9.63□□□□□ -0.87
CKLF-208ENST00000563092 FAM43BQ6ZT52 329 aaPredicted RBP9.63□□□□□ -0.87
CKLF-208ENST00000563092 NPAS4Q8IUM7 802 aa9.63□□□□□ -0.87
CKLF-208ENST00000563092 POF1BQ8WVV4 589 aa9.63□□□□□ -0.87
CKLF-208ENST00000563092 S1PR5Q9H228 398 aa9.63□□□□□ -0.87
CKLF-208ENST00000563092 FAM86C1Q9NVL1 165 aa9.63□□□□□ -0.87
CKLF-208ENST00000563092 BARX2Q9UMQ3 279 aaPredicted RBP9.63□□□□□ -0.87
CKLF-208ENST00000563092 KIAA1671Q9BY89 1806 aa9.62□□□□□ -0.87
CKLF-208ENST00000563092 FSD2A1L4K1 749 aa9.62□□□□□ -0.87
CKLF-208ENST00000563092 TRIM6-TRIM34B2RNG4 842 aa9.62□□□□□ -0.87
CKLF-208ENST00000563092 PPP1R37O75864 691 aa9.62□□□□□ -0.87
CKLF-208ENST00000563092 RPLP2P05387 115 aaKnown RBP9.62□□□□□ -0.87
CKLF-208ENST00000563092 SDSP20132 328 aa9.62□□□□□ -0.87
CKLF-208ENST00000563092 NBL1P41271 181 aa9.62□□□□□ -0.87
CKLF-208ENST00000563092 NRIP1P48552 1158 aa9.62□□□□□ -0.87
CKLF-208ENST00000563092 MFAP1P55081 439 aaKnown RBP9.62□□□□□ -0.87
CKLF-208ENST00000563092 UBE3AQ05086 875 aa9.62□□□□□ -0.87
CKLF-208ENST00000563092 TRAF1Q13077 416 aa9.62□□□□□ -0.87
CKLF-208ENST00000563092 PCNX4Q63HM2 1172 aa9.62□□□□□ -0.87
CKLF-208ENST00000563092 XRRA1Q6P2D8 792 aa9.62□□□□□ -0.87
CKLF-208ENST00000563092 RASGRP4Q8TDF6 673 aa9.62□□□□□ -0.87
CKLF-208ENST00000563092 FTHL17Q9BXU8 183 aa9.62□□□□□ -0.87
CKLF-208ENST00000563092 CDY2AQ9Y6F7 541 aa9.62□□□□□ -0.87
CKLF-208ENST00000563092 MYH6P13533 1939 aa9.62□□□□□ -0.87
CKLF-208ENST00000563092 KDM3AQ9Y4C1 1321 aa9.61□□□□□ -0.87
CKLF-208ENST00000563092 GSTTP1A0A1W2PQM5 241 aa9.61□□□□□ -0.87
CKLF-208ENST00000563092 PRR23AA6NEV1 266 aa9.61□□□□□ -0.87
CKLF-208ENST00000563092 PIK3CDO00329 1044 aa9.61□□□□□ -0.87
CKLF-208ENST00000563092 FSCN2O14926 492 aa9.61□□□□□ -0.87
CKLF-208ENST00000563092 DHX16O60231 1041 aaKnown RBP9.61□□□□□ -0.87
CKLF-208ENST00000563092 KCNA2P16389 499 aa9.61□□□□□ -0.87
CKLF-208ENST00000563092 CD52P31358 61 aa9.61□□□□□ -0.87
CKLF-208ENST00000563092 MRPS6P82932 125 aaKnown RBP9.61□□□□□ -0.87
CKLF-208ENST00000563092 RBM10P98175 930 aaKnown RBP9.61□□□□□ -0.87
CKLF-208ENST00000563092 PPFIA1Q13136 1202 aa9.61□□□□□ -0.87
CKLF-208ENST00000563092 GRIK4Q16099 956 aa9.61□□□□□ -0.87
CKLF-208ENST00000563092 DUSP6Q16828 381 aa9.61□□□□□ -0.87
CKLF-208ENST00000563092 ASCL5Q7RTU5 278 aa9.61□□□□□ -0.87
CKLF-208ENST00000563092 RSPH3Q86UC2 560 aa9.61□□□□□ -0.87
CKLF-208ENST00000563092 FCHSD1Q86WN1 690 aa9.61□□□□□ -0.87
CKLF-208ENST00000563092 GIMAP8Q8ND71 665 aaPredicted RBP9.61□□□□□ -0.87
CKLF-208ENST00000563092 DNAJB3Q8WWF6 145 aa9.61□□□□□ -0.87
CKLF-208ENST00000563092 RIPOR3Q96MK2 946 aa9.61□□□□□ -0.87
CKLF-208ENST00000563092 PIGSQ96S52 555 aa9.61□□□□□ -0.87
CKLF-208ENST00000563092 CDCA3Q99618 268 aaPredicted RBP9.61□□□□□ -0.87
CKLF-208ENST00000563092 DSCC1Q9BVC3 393 aa9.61□□□□□ -0.87
CKLF-208ENST00000563092 KRT23Q9C075 422 aa9.61□□□□□ -0.87
CKLF-208ENST00000563092 TUBE1Q9UJT0 475 aa9.61□□□□□ -0.87
CKLF-208ENST00000563092 PCDHGC5Q9Y5F6 944 aa9.61□□□□□ -0.87
CKLF-208ENST00000563092 IGSF9BQ9UPX0 1349 aa9.6□□□□□ -0.87
CKLF-208ENST00000563092 ZNF292O60281 2723 aa9.6□□□□□ -0.87
CKLF-208ENST00000563092 GVINP1Q7Z2Y8 2422 aa9.6□□□□□ -0.87
CKLF-208ENST00000563092 PNMA6FA0A0J9YX94 578 aa9.6□□□□□ -0.87
CKLF-208ENST00000563092 ATP9AO75110 1047 aa9.6□□□□□ -0.87
CKLF-208ENST00000563092 PDGFBP01127 241 aaPredicted RBP9.6□□□□□ -0.87
CKLF-208ENST00000563092 TCF7P36402 384 aaPredicted RBP9.6□□□□□ -0.87
CKLF-208ENST00000563092 TROAPQ12815 778 aa9.6□□□□□ -0.87
CKLF-208ENST00000563092 GRM4Q14833 912 aa9.6□□□□□ -0.87
CKLF-208ENST00000563092 IFIT1BQ5T764 474 aaKnown RBP9.6□□□□□ -0.87
CKLF-208ENST00000563092 UTP14CQ5TAP6 766 aaKnown RBP9.6□□□□□ -0.87
CKLF-208ENST00000563092 ANKRD45Q5TZF3 282 aa9.6□□□□□ -0.87
CKLF-208ENST00000563092 PDE12Q6L8Q7 609 aaKnown RBP9.6□□□□□ -0.87
CKLF-208ENST00000563092 SYCE2Q6PIF2 218 aa9.6□□□□□ -0.87
CKLF-208ENST00000563092 ERMP1Q7Z2K6 904 aa9.6□□□□□ -0.87
CKLF-208ENST00000563092 RBM23Q86U06 439 aaKnown RBP9.6□□□□□ -0.87
CKLF-208ENST00000563092 ATOH1Q92858 354 aaPredicted RBP9.6□□□□□ -0.87
CKLF-208ENST00000563092 RPGRIP1Q96KN7 1286 aa9.6□□□□□ -0.87
CKLF-208ENST00000563092 TMX1Q9H3N1 280 aa9.6□□□□□ -0.87
CKLF-208ENST00000563092 TLE6Q9H808 572 aa9.6□□□□□ -0.87
CKLF-208ENST00000563092 CNNM2Q9H8M5 875 aa9.6□□□□□ -0.87
CKLF-208ENST00000563092 ERAP1Q9NZ08 941 aa9.6□□□□□ -0.87
CKLF-208ENST00000563092 PADI3Q9ULW8 664 aa9.6□□□□□ -0.87
CKLF-208ENST00000563092 RIF1Q5UIP0 2472 aaKnown RBP9.6□□□□□ -0.87
CKLF-208ENST00000563092 PLXNA4Q9HCM2 1894 aa9.59□□□□□ -0.87
CKLF-208ENST00000563092 DNAH14Q0VDD8 3507 aa9.59□□□□□ -0.87
CKLF-208ENST00000563092 H0Y858 1186 aa9.59□□□□□ -0.87
CKLF-208ENST00000563092 MEIS2O14770 477 aa9.59□□□□□ -0.87
CKLF-208ENST00000563092 STAG3L1P0CL83 205 aa9.59□□□□□ -0.87
CKLF-208ENST00000563092 SCG2P13521 617 aa9.59□□□□□ -0.87
CKLF-208ENST00000563092 ITGB5P18084 799 aa9.59□□□□□ -0.87
CKLF-208ENST00000563092 GATMP50440 423 aa9.59□□□□□ -0.87
CKLF-208ENST00000563092 ERVFC1P60507 584 aa9.59□□□□□ -0.87
CKLF-208ENST00000563092 HDAC1Q13547 482 aaPredicted RBP9.59□□□□□ -0.87
CKLF-208ENST00000563092 IER5Q5VY09 327 aa9.59□□□□□ -0.87
CKLF-208ENST00000563092 CYB5R4Q7L1T6 521 aa9.59□□□□□ -0.87
CKLF-208ENST00000563092 SEPT1Q8WYJ6 367 aa9.59□□□□□ -0.87
CKLF-208ENST00000563092 GPRASP2Q96D09 838 aa9.59□□□□□ -0.87
CKLF-208ENST00000563092 NEK1Q96PY6 1258 aa9.59□□□□□ -0.87
CKLF-208ENST00000563092 PCYT2Q99447 389 aa9.59□□□□□ -0.87
CKLF-208ENST00000563092 UBAC1Q9BSL1 405 aa9.59□□□□□ -0.87
CKLF-208ENST00000563092 OSBPL3Q9H4L5 887 aa9.59□□□□□ -0.87
CKLF-208ENST00000563092 TLR9Q9NR96 1032 aa9.59□□□□□ -0.87
CKLF-208ENST00000563092 RTEL1Q9NZ71 1219 aa9.59□□□□□ -0.87
CKLF-208ENST00000563092 LZTS1Q9Y250 596 aa9.59□□□□□ -0.87
CKLF-208ENST00000563092 PCDHA2Q9Y5H9 948 aa9.59□□□□□ -0.87
CKLF-208ENST00000563092 WDR87Q6ZQQ6 2873 aa9.59□□□□□ -0.87
CKLF-208ENST00000563092 DOCK5Q9H7D0 1870 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms