RNA–Protein interactions for RNA: ENST00000562914.1

HERPUD1-205, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-205ENST00000562914 CLUL1Q15846 466 aa18.02■□□□□ 0.48
HERPUD1-205ENST00000562914 SMRP1Q8NCR6 262 aa18.02■□□□□ 0.48
HERPUD1-205ENST00000562914 SPPL3Q8TCT6 385 aa18.02■□□□□ 0.48
HERPUD1-205ENST00000562914 LINC01599Q8WXQ3 324 aa18.02■□□□□ 0.48
HERPUD1-205ENST00000562914 SDF4Q9BRK5 362 aa18.02■□□□□ 0.48
HERPUD1-205ENST00000562914 MYL10Q9BUA6 226 aa18.02■□□□□ 0.48
HERPUD1-205ENST00000562914 CELF4Q9BZC1 486 aaKnown RBP18.02■□□□□ 0.48
HERPUD1-205ENST00000562914 FAM49AQ9H0Q0 323 aaPredicted RBP18.02■□□□□ 0.48
HERPUD1-205ENST00000562914 AAASQ9NRG9 546 aa18.02■□□□□ 0.48
HERPUD1-205ENST00000562914 MUTYHQ9UIF7 546 aa18.02■□□□□ 0.48
HERPUD1-205ENST00000562914 LRFN2Q9ULH4 789 aa18.02■□□□□ 0.48
HERPUD1-205ENST00000562914 PADI3Q9ULW8 664 aa18.02■□□□□ 0.48
HERPUD1-205ENST00000562914 ATG2AQ2TAZ0 1938 aa18.02■□□□□ 0.47
HERPUD1-205ENST00000562914 PLEKHA8P1O95397 391 aa18.01■□□□□ 0.47
HERPUD1-205ENST00000562914 PDE4AP27815 886 aa18.01■□□□□ 0.47
HERPUD1-205ENST00000562914 RTN4RL1Q86UN2 441 aaPredicted RBP18.01■□□□□ 0.47
HERPUD1-205ENST00000562914 KLHL23Q8NBE8 558 aa18.01■□□□□ 0.47
HERPUD1-205ENST00000562914 MXRA8Q9BRK3 442 aa18.01■□□□□ 0.47
HERPUD1-205ENST00000562914 KCNH7Q9NS40 1196 aa18.01■□□□□ 0.47
HERPUD1-205ENST00000562914 RBM8AQ9Y5S9 174 aaKnown RBP18.01■□□□□ 0.47
HERPUD1-205ENST00000562914 SH2B2O14492 632 aaPredicted RBP18■□□□□ 0.47
HERPUD1-205ENST00000562914 LINC01565O15544 149 aa18■□□□□ 0.47
HERPUD1-205ENST00000562914 FOSP01100 380 aaPredicted RBP18■□□□□ 0.47
HERPUD1-205ENST00000562914 GTF2F1P35269 517 aaKnown RBP eCLIP18■□□□□ 0.47
HERPUD1-205ENST00000562914 STAT5BP51692 787 aa18■□□□□ 0.47
HERPUD1-205ENST00000562914 KRT76Q01546 638 aa18■□□□□ 0.47
HERPUD1-205ENST00000562914 PDE12Q6L8Q7 609 aaKnown RBP18■□□□□ 0.47
HERPUD1-205ENST00000562914 POF1BQ8WVV4 589 aa18■□□□□ 0.47
HERPUD1-205ENST00000562914 PCYT2Q99447 389 aa18■□□□□ 0.47
HERPUD1-205ENST00000562914 PKD2L1Q9P0L9 805 aa18■□□□□ 0.47
HERPUD1-205ENST00000562914 PCDHB12Q9Y5F1 795 aa18■□□□□ 0.47
HERPUD1-205ENST00000562914 SLC12A7Q9Y666 1083 aa18■□□□□ 0.47
HERPUD1-205ENST00000562914 MYO7AQ13402 2215 aa17.99■□□□□ 0.47
HERPUD1-205ENST00000562914 DNAJB1P25685 340 aa17.99■□□□□ 0.47
HERPUD1-205ENST00000562914 SARSP49591 514 aaKnown RBP17.99■□□□□ 0.47
HERPUD1-205ENST00000562914 ACTR2P61160 394 aa17.99■□□□□ 0.47
HERPUD1-205ENST00000562914 CBX2Q14781 532 aaPredicted RBP17.99■□□□□ 0.47
HERPUD1-205ENST00000562914 PLCB4Q15147 1175 aa17.99■□□□□ 0.47
HERPUD1-205ENST00000562914 UBE2SQ16763 222 aa17.99■□□□□ 0.47
HERPUD1-205ENST00000562914 PPP1R18Q6NYC8 613 aa17.99■□□□□ 0.47
HERPUD1-205ENST00000562914 CDCA3Q99618 268 aaPredicted RBP17.99■□□□□ 0.47
HERPUD1-205ENST00000562914 C1orf112Q9NSG2 853 aa17.99■□□□□ 0.47
HERPUD1-205ENST00000562914 CLEC1BQ9P126 229 aa17.99■□□□□ 0.47
HERPUD1-205ENST00000562914 PCDHB7Q9Y5E2 793 aa17.99■□□□□ 0.47
HERPUD1-205ENST00000562914 LOC730098B7Z3J9 87 aa17.98■□□□□ 0.47
HERPUD1-205ENST00000562914 ATG7O95352 703 aa17.98■□□□□ 0.47
HERPUD1-205ENST00000562914 NRIP1P48552 1158 aa17.98■□□□□ 0.47
HERPUD1-205ENST00000562914 MTHFD1LQ6UB35 978 aa17.98■□□□□ 0.47
HERPUD1-205ENST00000562914 TRIM67Q6ZTA4 783 aa17.98■□□□□ 0.47
HERPUD1-205ENST00000562914 TMTC3Q6ZXV5 915 aa17.98■□□□□ 0.47
HERPUD1-205ENST00000562914 HEATR3Q7Z4Q2 680 aa17.98■□□□□ 0.47
HERPUD1-205ENST00000562914 FANCBQ8NB91 859 aa17.98■□□□□ 0.47
HERPUD1-205ENST00000562914 GLT8D2Q9H1C3 349 aa17.98■□□□□ 0.47
HERPUD1-205ENST00000562914 COL1A2P08123 1366 aa17.98■□□□□ 0.47
HERPUD1-205ENST00000562914 hCG_1984214I3L0E3 225 aa17.97■□□□□ 0.47
HERPUD1-205ENST00000562914 HBP1O60381 514 aa17.97■□□□□ 0.47
HERPUD1-205ENST00000562914 SRGAP2BP0DMP2 458 aa17.97■□□□□ 0.47
HERPUD1-205ENST00000562914 ATF7P17544 494 aaPredicted RBP17.97■□□□□ 0.47
HERPUD1-205ENST00000562914 PTPN5P54829 565 aa17.97■□□□□ 0.47
HERPUD1-205ENST00000562914 TMEM62Q0P6H9 643 aa17.97■□□□□ 0.47
HERPUD1-205ENST00000562914 PAN2Q504Q3 1202 aaKnown RBP17.97■□□□□ 0.47
HERPUD1-205ENST00000562914 CEP55Q53EZ4 464 aa17.97■□□□□ 0.47
HERPUD1-205ENST00000562914 SYNE3Q6ZMZ3 975 aa17.97■□□□□ 0.47
HERPUD1-205ENST00000562914 ADGRD2Q7Z7M1 963 aa17.97■□□□□ 0.47
HERPUD1-205ENST00000562914 SGMS1Q86VZ5 419 aa17.97■□□□□ 0.47
HERPUD1-205ENST00000562914 CMTR1Q8N1G2 835 aaKnown RBP17.97■□□□□ 0.47
HERPUD1-205ENST00000562914 ZNF713Q8N859 430 aaPredicted RBP17.97■□□□□ 0.47
HERPUD1-205ENST00000562914 PHF7Q9BWX1 381 aaPredicted RBP17.97■□□□□ 0.47
HERPUD1-205ENST00000562914 TLE6Q9H808 572 aa17.97■□□□□ 0.47
HERPUD1-205ENST00000562914 ZNF318Q5VUA4 2279 aa17.96■□□□□ 0.47
HERPUD1-205ENST00000562914 IGKV6D-21A0A0A0MT36 114 aa17.96■□□□□ 0.47
HERPUD1-205ENST00000562914 TMEM221A6NGB7 291 aa17.96■□□□□ 0.47
HERPUD1-205ENST00000562914 M0R296 226 aa17.96■□□□□ 0.47
HERPUD1-205ENST00000562914 GPR182O15218 404 aa17.96■□□□□ 0.47
HERPUD1-205ENST00000562914 RPS6KA5O75582 802 aa17.96■□□□□ 0.47
HERPUD1-205ENST00000562914 CSPG5O95196 566 aa17.96■□□□□ 0.47
HERPUD1-205ENST00000562914 NFX1Q12986 1120 aaKnown RBP17.96■□□□□ 0.47
HERPUD1-205ENST00000562914 AP3B2Q13367 1082 aa17.96■□□□□ 0.47
HERPUD1-205ENST00000562914 FAM160B1Q5W0V3 765 aa17.96■□□□□ 0.47
HERPUD1-205ENST00000562914 SLC24A5Q71RS6 500 aa17.96■□□□□ 0.47
HERPUD1-205ENST00000562914 NIPA1Q7RTP0 329 aa17.96■□□□□ 0.47
HERPUD1-205ENST00000562914 SUGP1Q8IWZ8 645 aaKnown RBP17.96■□□□□ 0.47
HERPUD1-205ENST00000562914 MICAL1Q8TDZ2 1067 aa17.96■□□□□ 0.47
HERPUD1-205ENST00000562914 PBXIP1Q96AQ6 731 aa17.96■□□□□ 0.47
HERPUD1-205ENST00000562914 TMX1Q9H3N1 280 aa17.96■□□□□ 0.47
HERPUD1-205ENST00000562914 RIC8AQ9NPQ8 531 aa17.96■□□□□ 0.47
HERPUD1-205ENST00000562914 TLR9Q9NR96 1032 aa17.96■□□□□ 0.47
HERPUD1-205ENST00000562914 RGS18Q9NS28 235 aa17.96■□□□□ 0.47
HERPUD1-205ENST00000562914 RBM28Q9NW13 759 aaKnown RBP17.96■□□□□ 0.47
HERPUD1-205ENST00000562914 DENND3A2RUS2 1198 aa17.95■□□□□ 0.46
HERPUD1-205ENST00000562914 RXRAP19793 462 aa17.95■□□□□ 0.46
HERPUD1-205ENST00000562914 ZXDAP98168 799 aa17.95■□□□□ 0.46
HERPUD1-205ENST00000562914 ZNF484Q5JVG2 852 aa17.95■□□□□ 0.46
HERPUD1-205ENST00000562914 SPOUT1Q5T280 376 aaKnown RBP17.95■□□□□ 0.46
HERPUD1-205ENST00000562914 ATP8B4Q8TF62 1192 aa17.95■□□□□ 0.46
HERPUD1-205ENST00000562914 TRAPPC12Q8WVT3 735 aa17.95■□□□□ 0.46
HERPUD1-205ENST00000562914 ZBTB10Q96DT7 871 aa17.95■□□□□ 0.46
HERPUD1-205ENST00000562914 AGO4Q9HCK5 861 aaKnown RBP17.95■□□□□ 0.46
HERPUD1-205ENST00000562914 ERVK-5Q9HDB9 667 aa17.95■□□□□ 0.46
HERPUD1-205ENST00000562914 LZTS1Q9Y250 596 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms