RNA–Protein interactions for RNA: ENST00000562884.1

CYLD-204, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 3

Gene CYLD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-204ENST00000562884 CCDC83Q8IWF9 413 aa10.04□□□□□ -0.8
CYLD-204ENST00000562884 CKAP2LQ8IYA6 745 aa10.04□□□□□ -0.8
CYLD-204ENST00000562884 ZNF710Q8N1W2 664 aa10.04□□□□□ -0.8
CYLD-204ENST00000562884 FAM184AQ8NB25 1140 aa10.04□□□□□ -0.8
CYLD-204ENST00000562884 ATP8B4Q8TF62 1192 aa10.04□□□□□ -0.8
CYLD-204ENST00000562884 BBXQ8WY36 941 aaPredicted RBP10.04□□□□□ -0.8
CYLD-204ENST00000562884 APBB2Q92870 758 aa10.04□□□□□ -0.8
CYLD-204ENST00000562884 SLC9A7Q96T83 725 aa10.04□□□□□ -0.8
CYLD-204ENST00000562884 DISC1Q9NRI5 854 aa10.04□□□□□ -0.8
CYLD-204ENST00000562884 NRBP2Q9NSY0 501 aa10.04□□□□□ -0.8
CYLD-204ENST00000562884 DDX25Q9UHL0 483 aaKnown RBP10.04□□□□□ -0.8
CYLD-204ENST00000562884 CEP131Q9UPN4 1083 aa10.04□□□□□ -0.8
CYLD-204ENST00000562884 TELO2Q9Y4R8 837 aa10.04□□□□□ -0.8
CYLD-204ENST00000562884 MAFBQ9Y5Q3 323 aaPredicted RBP10.04□□□□□ -0.8
CYLD-204ENST00000562884 SMIM35A0A1B0GVV1 85 aa10.03□□□□□ -0.8
CYLD-204ENST00000562884 M0QZ92 97 aa10.03□□□□□ -0.8
CYLD-204ENST00000562884 CCNT1O60563 726 aaKnown RBP10.03□□□□□ -0.8
CYLD-204ENST00000562884 DKC1O60832 514 aaKnown RBP eCLIP10.03□□□□□ -0.8
CYLD-204ENST00000562884 PSMD10O75832 226 aa10.03□□□□□ -0.8
CYLD-204ENST00000562884 ATP2A2P16615 1042 aaKnown RBP10.03□□□□□ -0.8
CYLD-204ENST00000562884 HIC1Q14526 733 aa10.03□□□□□ -0.8
CYLD-204ENST00000562884 IER5Q5VY09 327 aa10.03□□□□□ -0.8
CYLD-204ENST00000562884 KRT40Q6A162 431 aa10.03□□□□□ -0.8
CYLD-204ENST00000562884 PIK3AP1Q6ZUJ8 805 aa10.03□□□□□ -0.8
CYLD-204ENST00000562884 MIER3Q7Z3K6 550 aa10.03□□□□□ -0.8
CYLD-204ENST00000562884 CCDC60Q8IWA6 550 aaPredicted RBP10.03□□□□□ -0.8
CYLD-204ENST00000562884 SLFN12Q8IYM2 578 aa10.03□□□□□ -0.8
CYLD-204ENST00000562884 SEPT8Q92599 483 aa10.03□□□□□ -0.8
CYLD-204ENST00000562884 C8orf76Q96K31 380 aa10.03□□□□□ -0.8
CYLD-204ENST00000562884 TBC1D32Q96NH3 1257 aa10.03□□□□□ -0.8
CYLD-204ENST00000562884 PCDHA2Q9Y5H9 948 aa10.03□□□□□ -0.8
CYLD-204ENST00000562884 PCDHA11Q9Y5I1 949 aa10.03□□□□□ -0.8
CYLD-204ENST00000562884 SQORQ9Y6N5 450 aa10.03□□□□□ -0.8
CYLD-204ENST00000562884 MAGEB2O15479 319 aa10.02□□□□□ -0.81
CYLD-204ENST00000562884 EDIL3O43854 480 aa10.02□□□□□ -0.81
CYLD-204ENST00000562884 JAK2O60674 1132 aa10.02□□□□□ -0.81
CYLD-204ENST00000562884 NBNO60934 754 aa10.02□□□□□ -0.81
CYLD-204ENST00000562884 TDP2O95551 362 aa10.02□□□□□ -0.81
CYLD-204ENST00000562884 DNAJB2P25686 324 aa10.02□□□□□ -0.81
CYLD-204ENST00000562884 IGBP1P78318 339 aa10.02□□□□□ -0.81
CYLD-204ENST00000562884 GNL2Q13823 731 aaKnown RBP10.02□□□□□ -0.81
CYLD-204ENST00000562884 ODR4Q5SWX8 454 aa10.02□□□□□ -0.81
CYLD-204ENST00000562884 MARCH8Q5T0T0 291 aa10.02□□□□□ -0.81
CYLD-204ENST00000562884 TRAF7Q6Q0C0 670 aa10.02□□□□□ -0.81
CYLD-204ENST00000562884 DIS3L2Q8IYB7 885 aaKnown RBP10.02□□□□□ -0.81
CYLD-204ENST00000562884 USP38Q8NB14 1042 aa10.02□□□□□ -0.81
CYLD-204ENST00000562884 ETNPPLQ8TBG4 499 aa10.02□□□□□ -0.81
CYLD-204ENST00000562884 OXER1Q8TDS5 423 aa10.02□□□□□ -0.81
CYLD-204ENST00000562884 TIFAQ96CG3 184 aa10.02□□□□□ -0.81
CYLD-204ENST00000562884 VWCEQ96DN2 955 aa10.02□□□□□ -0.81
CYLD-204ENST00000562884 SEMA6BQ9H3T3 888 aa10.02□□□□□ -0.81
CYLD-204ENST00000562884 MTMR10Q9NXD2 777 aa10.02□□□□□ -0.81
CYLD-204ENST00000562884 CXXC1Q9P0U4 656 aaPredicted RBP10.02□□□□□ -0.81
CYLD-204ENST00000562884 GABBR1Q9UBS5 961 aa10.02□□□□□ -0.81
CYLD-204ENST00000562884 BTBD18B2RXH4 712 aa10.01□□□□□ -0.81
CYLD-204ENST00000562884 KLRC1P26715 233 aa10.01□□□□□ -0.81
CYLD-204ENST00000562884 TMOD1P28289 359 aa10.01□□□□□ -0.81
CYLD-204ENST00000562884 MRPS6P82932 125 aaKnown RBP10.01□□□□□ -0.81
CYLD-204ENST00000562884 CDC42EP1Q00587 391 aa10.01□□□□□ -0.81
CYLD-204ENST00000562884 NR5A1Q13285 461 aa10.01□□□□□ -0.81
CYLD-204ENST00000562884 PPP2R5CQ13362 524 aa10.01□□□□□ -0.81
CYLD-204ENST00000562884 ORC2Q13416 577 aaPredicted RBP10.01□□□□□ -0.81
CYLD-204ENST00000562884 GPNMBQ14956 572 aa10.01□□□□□ -0.81
CYLD-204ENST00000562884 PLEKHG4Q58EX7 1191 aa10.01□□□□□ -0.81
CYLD-204ENST00000562884 MTHFD1LQ6UB35 978 aa10.01□□□□□ -0.81
CYLD-204ENST00000562884 EXOC8Q8IYI6 725 aa10.01□□□□□ -0.81
CYLD-204ENST00000562884 FBXO18Q8NFZ0 1043 aa10.01□□□□□ -0.81
CYLD-204ENST00000562884 DNAJB3Q8WWF6 145 aa10.01□□□□□ -0.81
CYLD-204ENST00000562884 TNFRSF25Q93038 417 aa10.01□□□□□ -0.81
CYLD-204ENST00000562884 WNT8BQ93098 351 aa10.01□□□□□ -0.81
CYLD-204ENST00000562884 PBX4Q9BYU1 374 aa10.01□□□□□ -0.81
CYLD-204ENST00000562884 FOXP1Q9H334 677 aaPredicted RBP10.01□□□□□ -0.81
CYLD-204ENST00000562884 UNC45AQ9H3U1 944 aa10.01□□□□□ -0.81
CYLD-204ENST00000562884 SLC28A3Q9HAS3 691 aa10.01□□□□□ -0.81
CYLD-204ENST00000562884 KCNMB3Q9NPA1 279 aa10.01□□□□□ -0.81
CYLD-204ENST00000562884 GJB4Q9NTQ9 266 aa10.01□□□□□ -0.81
CYLD-204ENST00000562884 IGSF9BQ9UPX0 1349 aa10.01□□□□□ -0.81
CYLD-204ENST00000562884 TTC3P53804 2025 aa10□□□□□ -0.81
CYLD-204ENST00000562884 CHMP2AO43633 222 aa10□□□□□ -0.81
CYLD-204ENST00000562884 AMHP03971 560 aa10□□□□□ -0.81
CYLD-204ENST00000562884 OATP04181 439 aa10□□□□□ -0.81
CYLD-204ENST00000562884 CTSHP09668 335 aa10□□□□□ -0.81
CYLD-204ENST00000562884 WDR5P61964 334 aaKnown RBP10□□□□□ -0.81
CYLD-204ENST00000562884 ST3GAL1Q11201 340 aa10□□□□□ -0.81
CYLD-204ENST00000562884 MBTPS1Q14703 1052 aa10□□□□□ -0.81
CYLD-204ENST00000562884 XKR3Q5GH77 459 aa10□□□□□ -0.81
CYLD-204ENST00000562884 B3GNT9Q6UX72 402 aa10□□□□□ -0.81
CYLD-204ENST00000562884 RUFY4Q6ZNE9 571 aa10□□□□□ -0.81
CYLD-204ENST00000562884 HERC6Q8IVU3 1022 aa10□□□□□ -0.81
CYLD-204ENST00000562884 DBF4BQ8NFT6 615 aa10□□□□□ -0.81
CYLD-204ENST00000562884 UIMC1Q96RL1 719 aa10□□□□□ -0.81
CYLD-204ENST00000562884 JPH2Q9BR39 696 aaPredicted RBP10□□□□□ -0.81
CYLD-204ENST00000562884 ZBED2Q9BTP6 218 aa10□□□□□ -0.81
CYLD-204ENST00000562884 FTHL17Q9BXU8 183 aa10□□□□□ -0.81
CYLD-204ENST00000562884 IFIH1Q9BYX4 1025 aaKnown RBP10□□□□□ -0.81
CYLD-204ENST00000562884 ZNF576Q9H609 170 aa10□□□□□ -0.81
CYLD-204ENST00000562884 PPME1Q9Y570 386 aa10□□□□□ -0.81
CYLD-204ENST00000562884 ZSCAN21Q9Y5A6 473 aaPredicted RBP10□□□□□ -0.81
CYLD-204ENST00000562884 KDM3AQ9Y4C1 1321 aa10□□□□□ -0.81
CYLD-204ENST00000562884 PTPRSQ13332 1948 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms