RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 CUL4BQ13620 913 aa8.23□□□□□ -1.09
TCF4-216ENST00000562680 MFSD14CQ5VZR4 134 aa8.23□□□□□ -1.09
TCF4-216ENST00000562680 POTEBQ6S5H4 581 aa8.23□□□□□ -1.09
TCF4-216ENST00000562680 ACER1Q8TDN7 264 aa8.23□□□□□ -1.09
TCF4-216ENST00000562680 PSPC1Q8WXF1 523 aaKnown RBP8.23□□□□□ -1.09
TCF4-216ENST00000562680 EDEM3Q9BZQ6 932 aa8.23□□□□□ -1.09
TCF4-216ENST00000562680 MYO1AQ9UBC5 1043 aa8.23□□□□□ -1.09
TCF4-216ENST00000562680 FAM198AQ9UFP1 575 aa8.23□□□□□ -1.09
TCF4-216ENST00000562680 INO80B-WBP1J3KQ70 363 aa8.23□□□□□ -1.09
TCF4-216ENST00000562680 RPA1P27694 616 aa8.23□□□□□ -1.09
TCF4-216ENST00000562680 SH3BGRP55822 239 aaPredicted RBP8.23□□□□□ -1.09
TCF4-216ENST00000562680 SNRPFP62306 86 aaKnown RBP8.23□□□□□ -1.09
TCF4-216ENST00000562680 PPP2R5EQ16537 467 aa8.23□□□□□ -1.09
TCF4-216ENST00000562680 CEP128Q6ZU80 1094 aa8.23□□□□□ -1.09
TCF4-216ENST00000562680 OTUD6BQ8N6M0 293 aa8.23□□□□□ -1.09
TCF4-216ENST00000562680 GPRC5AQ8NFJ5 357 aa8.23□□□□□ -1.09
TCF4-216ENST00000562680 MAIP1Q8WWC4 291 aa8.23□□□□□ -1.09
TCF4-216ENST00000562680 ATG4CQ96DT6 458 aa8.23□□□□□ -1.09
TCF4-216ENST00000562680 IFIH1Q9BYX4 1025 aaKnown RBP8.23□□□□□ -1.09
TCF4-216ENST00000562680 TRIM9Q9C026 710 aa8.23□□□□□ -1.09
TCF4-216ENST00000562680 DGAT1O75907 488 aa8.23□□□□□ -1.09
TCF4-216ENST00000562680 PHKA2P46019 1235 aa8.23□□□□□ -1.09
TCF4-216ENST00000562680 TNFAIP2Q03169 654 aa8.23□□□□□ -1.09
TCF4-216ENST00000562680 TAF1CQ15572 869 aaPredicted RBP8.23□□□□□ -1.09
TCF4-216ENST00000562680 KYAT1Q16773 422 aa8.23□□□□□ -1.09
TCF4-216ENST00000562680 TRIM58Q8NG06 486 aa8.23□□□□□ -1.09
TCF4-216ENST00000562680 TRIM11Q96F44 468 aa8.23□□□□□ -1.09
TCF4-216ENST00000562680 ZFYVE28Q9HCC9 887 aa8.23□□□□□ -1.09
TCF4-216ENST00000562680 NLRC4Q9NPP4 1024 aa8.23□□□□□ -1.09
TCF4-216ENST00000562680 ANKEF1Q9NU02 776 aa8.23□□□□□ -1.09
TCF4-216ENST00000562680 AKT3Q9Y243 479 aa8.23□□□□□ -1.09
TCF4-216ENST00000562680 CCL15-CCL14A0A0B4J2E2 113 aa8.22□□□□□ -1.09
TCF4-216ENST00000562680 NDC80O14777 642 aa8.22□□□□□ -1.09
TCF4-216ENST00000562680 GBP2P32456 591 aaPredicted RBP8.22□□□□□ -1.09
TCF4-216ENST00000562680 HLTFQ14527 1009 aaKnown RBP eCLIP8.22□□□□□ -1.09
TCF4-216ENST00000562680 PTPAQ15257 358 aa8.22□□□□□ -1.09
TCF4-216ENST00000562680 CCL15Q16663 113 aa8.22□□□□□ -1.09
TCF4-216ENST00000562680 LRRC8AQ8IWT6 810 aa8.22□□□□□ -1.09
TCF4-216ENST00000562680 HVCN1Q96D96 273 aa8.22□□□□□ -1.09
TCF4-216ENST00000562680 GSTTP1A0A1W2PQM5 241 aa8.22□□□□□ -1.09
TCF4-216ENST00000562680 POLR2BP30876 1174 aaKnown RBP8.22□□□□□ -1.09
TCF4-216ENST00000562680 MXI1P50539 228 aa8.22□□□□□ -1.09
TCF4-216ENST00000562680 EFNA5P52803 228 aa8.22□□□□□ -1.09
TCF4-216ENST00000562680 IRX1P78414 480 aaPredicted RBP8.22□□□□□ -1.09
TCF4-216ENST00000562680 TCP11X2Q5H9J9 407 aa8.22□□□□□ -1.09
TCF4-216ENST00000562680 C10orf76Q5T2E6 689 aa8.22□□□□□ -1.09
TCF4-216ENST00000562680 SYT10Q6XYQ8 523 aa8.22□□□□□ -1.09
TCF4-216ENST00000562680 NIPA1Q7RTP0 329 aa8.22□□□□□ -1.09
TCF4-216ENST00000562680 CCDC170Q8IYT3 715 aa8.22□□□□□ -1.09
TCF4-216ENST00000562680 SCFD2Q8WU76 684 aa8.22□□□□□ -1.09
TCF4-216ENST00000562680 ANKRD36BP1Q96IX9 119 aa8.22□□□□□ -1.09
TCF4-216ENST00000562680 WDR18Q9BV38 432 aa8.22□□□□□ -1.09
TCF4-216ENST00000562680 STRCP1A6NGW2 1772 aa8.22□□□□□ -1.09
TCF4-216ENST00000562680 ZNF233A6NK53 670 aa8.22□□□□□ -1.09
TCF4-216ENST00000562680 PLA2G6O60733 806 aa8.22□□□□□ -1.09
TCF4-216ENST00000562680 RHOBTB3O94955 611 aa8.22□□□□□ -1.09
TCF4-216ENST00000562680 H2AFZP0C0S5 128 aa8.22□□□□□ -1.09
TCF4-216ENST00000562680 RFX1P22670 979 aa8.22□□□□□ -1.09
TCF4-216ENST00000562680 PPATQ06203 517 aa8.22□□□□□ -1.09
TCF4-216ENST00000562680 SEPT7Q16181 437 aaKnown RBP8.22□□□□□ -1.09
TCF4-216ENST00000562680 NBPF12Q5TAG4 269 aaPredicted RBP8.22□□□□□ -1.09
TCF4-216ENST00000562680 H2AFVQ71UI9 128 aa8.22□□□□□ -1.09
TCF4-216ENST00000562680 SFR1Q86XK3 245 aa8.22□□□□□ -1.09
TCF4-216ENST00000562680 RDH13Q8NBN7 331 aa8.22□□□□□ -1.09
TCF4-216ENST00000562680 SEPT1Q8WYJ6 367 aa8.22□□□□□ -1.09
TCF4-216ENST00000562680 PANX2Q96RD6 677 aa8.22□□□□□ -1.09
TCF4-216ENST00000562680 NDST4Q9H3R1 872 aa8.22□□□□□ -1.09
TCF4-216ENST00000562680 DONSONQ9NYP3 566 aa8.22□□□□□ -1.09
TCF4-216ENST00000562680 LTBP3Q9NS15 1303 aa8.22□□□□□ -1.09
TCF4-216ENST00000562680 LGALS16A8MUM7 142 aa8.22□□□□□ -1.09
TCF4-216ENST00000562680 E9PMD0 336 aa8.22□□□□□ -1.09
TCF4-216ENST00000562680 SPOPO43791 374 aa8.22□□□□□ -1.09
TCF4-216ENST00000562680 ECM2O94769 699 aaPredicted RBP8.22□□□□□ -1.09
TCF4-216ENST00000562680 CD19P15391 556 aa8.22□□□□□ -1.09
TCF4-216ENST00000562680 PKN1Q16512 942 aa8.22□□□□□ -1.09
TCF4-216ENST00000562680 KNOP1Q1ED39 458 aaKnown RBP8.22□□□□□ -1.09
TCF4-216ENST00000562680 ZNF746Q6NUN9 644 aaPredicted RBP8.22□□□□□ -1.09
TCF4-216ENST00000562680 XXYLT1Q8NBI6 393 aa8.22□□□□□ -1.09
TCF4-216ENST00000562680 ACRBPQ8NEB7 543 aa8.22□□□□□ -1.09
TCF4-216ENST00000562680 MTRQ99707 1265 aa8.22□□□□□ -1.09
TCF4-216ENST00000562680 FHDC1Q9C0D6 1143 aaPredicted RBP8.22□□□□□ -1.09
TCF4-216ENST00000562680 GBA2Q9HCG7 927 aaPredicted RBP8.22□□□□□ -1.09
TCF4-216ENST00000562680 GABBR1Q9UBS5 961 aa8.22□□□□□ -1.09
TCF4-216ENST00000562680 PDXKO00764 312 aa8.22□□□□□ -1.09
TCF4-216ENST00000562680 GAS2O43903 313 aaKnown RBP8.22□□□□□ -1.09
TCF4-216ENST00000562680 MYZAPP0CAP1 466 aa8.22□□□□□ -1.09
TCF4-216ENST00000562680 PDE6CP51160 858 aa8.22□□□□□ -1.09
TCF4-216ENST00000562680 MAPK6Q16659 721 aa8.22□□□□□ -1.09
TCF4-216ENST00000562680 SKIDA1Q1XH10 827 aa8.22□□□□□ -1.09
TCF4-216ENST00000562680 ERO1AQ96HE7 468 aa8.22□□□□□ -1.09
TCF4-216ENST00000562680 EPN1Q9Y6I3 576 aaPredicted RBP8.22□□□□□ -1.09
TCF4-216ENST00000562680 KRT19P08727 400 aa8.21□□□□□ -1.09
TCF4-216ENST00000562680 VCAM1P19320 739 aa8.21□□□□□ -1.09
TCF4-216ENST00000562680 RFC5P40937 340 aa8.21□□□□□ -1.09
TCF4-216ENST00000562680 HUNKP57058 714 aa8.21□□□□□ -1.09
TCF4-216ENST00000562680 POLR2FP61218 127 aaKnown RBP8.21□□□□□ -1.09
TCF4-216ENST00000562680 FKBP1BP68106 108 aa8.21□□□□□ -1.09
TCF4-216ENST00000562680 PTK2Q05397 1052 aa8.21□□□□□ -1.09
TCF4-216ENST00000562680 LRRC41Q15345 812 aa8.21□□□□□ -1.09
TCF4-216ENST00000562680 RINLQ6ZS11 566 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms