RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 UHRF1BP1Q6BDS2 1440 aa6.65□□□□□ -1.35
SMG1-206ENST00000562668 ARHGAP23Q9P227 1491 aa6.65□□□□□ -1.35
SMG1-206ENST00000562668 ADGRB3O60242 1522 aa6.65□□□□□ -1.35
SMG1-206ENST00000562668 IQCA1LA6NCM1 817 aa6.64□□□□□ -1.35
SMG1-206ENST00000562668 KRIT1O00522 736 aa6.64□□□□□ -1.35
SMG1-206ENST00000562668 KLF4O43474 513 aa6.64□□□□□ -1.35
SMG1-206ENST00000562668 MSCO60682 206 aa6.64□□□□□ -1.35
SMG1-206ENST00000562668 LRG1P02750 347 aa6.64□□□□□ -1.35
SMG1-206ENST00000562668 ADAM17P78536 824 aa6.64□□□□□ -1.35
SMG1-206ENST00000562668 TTC9BQ8N6N2 239 aa6.64□□□□□ -1.35
SMG1-206ENST00000562668 TTLL11Q8NHH1 800 aa6.64□□□□□ -1.35
SMG1-206ENST00000562668 MPHOSPH9Q99550 1183 aa6.64□□□□□ -1.35
SMG1-206ENST00000562668 PPARGC1AQ9UBK2 798 aaKnown RBP6.64□□□□□ -1.35
SMG1-206ENST00000562668 ASH2LQ9UBL3 628 aa6.64□□□□□ -1.35
SMG1-206ENST00000562668 SLIT1O75093 1534 aa6.64□□□□□ -1.35
SMG1-206ENST00000562668 NEURL4Q96JN8 1562 aa6.64□□□□□ -1.35
SMG1-206ENST00000562668 CYP7B1O75881 506 aa6.63□□□□□ -1.35
SMG1-206ENST00000562668 POLR1AO95602 1720 aaPredicted RBP6.63□□□□□ -1.35
SMG1-206ENST00000562668 IDI1Q13907 227 aa6.63□□□□□ -1.35
SMG1-206ENST00000562668 ZXDCQ2QGD7 858 aaPredicted RBP6.63□□□□□ -1.35
SMG1-206ENST00000562668 PIP4K2CQ8TBX8 421 aa6.63□□□□□ -1.35
SMG1-206ENST00000562668 ZCCHC14Q8WYQ9 949 aaKnown RBP6.63□□□□□ -1.35
SMG1-206ENST00000562668 YTHDC1Q96MU7 727 aaKnown RBP6.63□□□□□ -1.35
SMG1-206ENST00000562668 L2HGDHQ9H9P8 463 aa6.63□□□□□ -1.35
SMG1-206ENST00000562668 SLC6A20Q9NP91 592 aa6.63□□□□□ -1.35
SMG1-206ENST00000562668 ARHGEF4Q9NR80 690 aa6.63□□□□□ -1.35
SMG1-206ENST00000562668 CROTQ9UKG9 612 aa6.63□□□□□ -1.35
SMG1-206ENST00000562668 IFT172Q9UG01 1749 aa6.62□□□□□ -1.35
SMG1-206ENST00000562668 ZFYVE9O95405 1425 aa6.62□□□□□ -1.35
SMG1-206ENST00000562668 ANKRD30BQ9BXX2 1392 aa6.62□□□□□ -1.35
SMG1-206ENST00000562668 CYP1A1P04798 512 aaPredicted RBP6.62□□□□□ -1.35
SMG1-206ENST00000562668 FGFR1P11362 822 aa6.62□□□□□ -1.35
SMG1-206ENST00000562668 GRK2P25098 689 aa6.62□□□□□ -1.35
SMG1-206ENST00000562668 GRK3P35626 688 aa6.62□□□□□ -1.35
SMG1-206ENST00000562668 HSPA2P54652 639 aa6.62□□□□□ -1.35
SMG1-206ENST00000562668 TMC5Q6UXY8 1006 aa6.62□□□□□ -1.35
SMG1-206ENST00000562668 PLEKHH3Q7Z736 793 aa6.62□□□□□ -1.35
SMG1-206ENST00000562668 TRIM48Q8IWZ4 208 aa6.62□□□□□ -1.35
SMG1-206ENST00000562668 ST13P5Q8NFI4 369 aaPredicted RBP6.62□□□□□ -1.35
SMG1-206ENST00000562668 DCAF4Q8WV16 495 aa6.62□□□□□ -1.35
SMG1-206ENST00000562668 SAMD11Q96NU1 681 aa6.62□□□□□ -1.35
SMG1-206ENST00000562668 GPR20Q99678 358 aa6.62□□□□□ -1.35
SMG1-206ENST00000562668 JAM3Q9BX67 310 aa6.62□□□□□ -1.35
SMG1-206ENST00000562668 KRTAP17-1Q9BYP8 105 aa6.62□□□□□ -1.35
SMG1-206ENST00000562668 KRTAP3-1Q9BYR8 98 aa6.62□□□□□ -1.35
SMG1-206ENST00000562668 HSPBP1Q9NZL4 362 aa6.62□□□□□ -1.35
SMG1-206ENST00000562668 WASF3Q9UPY6 502 aa6.62□□□□□ -1.35
SMG1-206ENST00000562668 MYRFQ9Y2G1 1151 aa6.62□□□□□ -1.35
SMG1-206ENST00000562668 KIF1BO60333 1816 aa6.62□□□□□ -1.35
SMG1-206ENST00000562668 SPATA31E1Q6ZUB1 1445 aa6.61□□□□□ -1.35
SMG1-206ENST00000562668 DHX57Q6P158 1386 aaKnown RBP6.61□□□□□ -1.35
SMG1-206ENST00000562668 PRODHO43272 600 aa6.61□□□□□ -1.35
SMG1-206ENST00000562668 B4GALT3O60512 393 aa6.61□□□□□ -1.35
SMG1-206ENST00000562668 INSRRP14616 1297 aa6.61□□□□□ -1.35
SMG1-206ENST00000562668 IL13P35225 146 aa6.61□□□□□ -1.35
SMG1-206ENST00000562668 MLLT6P55198 1093 aaPredicted RBP6.61□□□□□ -1.35
SMG1-206ENST00000562668 SURF1Q15526 300 aa6.61□□□□□ -1.35
SMG1-206ENST00000562668 KIZQ2M2Z5 673 aa6.61□□□□□ -1.35
SMG1-206ENST00000562668 MBD6Q96DN6 1003 aa6.61□□□□□ -1.35
SMG1-206ENST00000562668 LOXL4Q96JB6 756 aa6.61□□□□□ -1.35
SMG1-206ENST00000562668 ZFYVE21Q9BQ24 234 aa6.61□□□□□ -1.35
SMG1-206ENST00000562668 TMEM168Q9H0V1 697 aa6.61□□□□□ -1.35
SMG1-206ENST00000562668 SLC52A1Q9NWF4 448 aa6.61□□□□□ -1.35
SMG1-206ENST00000562668 NEXMIFQ5QGS0 1516 aa6.6□□□□□ -1.35
SMG1-206ENST00000562668 MED14O60244 1454 aa6.6□□□□□ -1.35
SMG1-206ENST00000562668 PPLO60437 1756 aa6.6□□□□□ -1.35
SMG1-206ENST00000562668 ZNF536O15090 1300 aa6.6□□□□□ -1.35
SMG1-206ENST00000562668 SLC27A2O14975 620 aa6.6□□□□□ -1.35
SMG1-206ENST00000562668 LAMTOR5O43504 91 aa6.6□□□□□ -1.35
SMG1-206ENST00000562668 PABPC1P11940 636 aaKnown RBP6.6□□□□□ -1.35
SMG1-206ENST00000562668 RAB33AQ14088 237 aa6.6□□□□□ -1.35
SMG1-206ENST00000562668 PUM1Q14671 1186 aaKnown RBP eCLIP6.6□□□□□ -1.35
SMG1-206ENST00000562668 NTRK3Q16288 839 aa6.6□□□□□ -1.35
SMG1-206ENST00000562668 VASNQ6EMK4 673 aa6.6□□□□□ -1.35
SMG1-206ENST00000562668 PKN3Q6P5Z2 889 aa6.6□□□□□ -1.35
SMG1-206ENST00000562668 LBX2Q6XYB7 198 aa6.6□□□□□ -1.35
SMG1-206ENST00000562668 OTOP3Q7RTS5 596 aa6.6□□□□□ -1.35
SMG1-206ENST00000562668 UHMK1Q8TAS1 419 aaKnown RBP6.6□□□□□ -1.35
SMG1-206ENST00000562668 OSBP2Q969R2 916 aa6.6□□□□□ -1.35
SMG1-206ENST00000562668 C8orf49Q96NF6 230 aa6.6□□□□□ -1.35
SMG1-206ENST00000562668 SSBP3Q9BWW4 388 aaPredicted RBP6.6□□□□□ -1.35
SMG1-206ENST00000562668 RBPJLQ9UBG7 517 aa6.6□□□□□ -1.35
SMG1-206ENST00000562668 FTSJ1Q9UET6 329 aa6.6□□□□□ -1.35
SMG1-206ENST00000562668 NRXN3Q9Y4C0 1643 aa6.6□□□□□ -1.35
SMG1-206ENST00000562668 TMEM2Q9UHN6 1383 aa6.59□□□□□ -1.35
SMG1-206ENST00000562668 TRAV20A0A0B4J274 112 aa6.59□□□□□ -1.35
SMG1-206ENST00000562668 GPR85P60893 370 aa6.59□□□□□ -1.35
SMG1-206ENST00000562668 GRIN1Q05586 938 aa6.59□□□□□ -1.35
SMG1-206ENST00000562668 STYK1Q6J9G0 422 aa6.59□□□□□ -1.35
SMG1-206ENST00000562668 TRMT10BQ6PF06 316 aaKnown RBP6.59□□□□□ -1.35
SMG1-206ENST00000562668 KCNT2Q6UVM3 1135 aa6.59□□□□□ -1.35
SMG1-206ENST00000562668 GLB1LQ6UWU2 654 aa6.59□□□□□ -1.35
SMG1-206ENST00000562668 PROSER1Q86XN7 944 aa6.59□□□□□ -1.35
SMG1-206ENST00000562668 LRRC47Q8N1G4 583 aaKnown RBP6.59□□□□□ -1.35
SMG1-206ENST00000562668 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.59□□□□□ -1.351e-14■■■■■ 34.4
SMG1-206ENST00000562668 DLL4Q9NR61 685 aa6.59□□□□□ -1.35
SMG1-206ENST00000562668 NUB1Q9Y5A7 615 aa6.59□□□□□ -1.35
SMG1-206ENST00000562668 SETD1AO15047 1707 aaKnown RBP6.59□□□□□ -1.36
SMG1-206ENST00000562668 IQGAP1P46940 1657 aa6.58□□□□□ -1.36
SMG1-206ENST00000562668 GNAT1P11488 350 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms