RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 ADCY8P40145 1251 aa5.05□□□□□ -1.6
DENND4A-205ENST00000562540 KCNQ1P51787 676 aa5.05□□□□□ -1.6
DENND4A-205ENST00000562540 TBR1Q16650 682 aa5.05□□□□□ -1.6
DENND4A-205ENST00000562540 DNAJC10Q8IXB1 793 aa5.05□□□□□ -1.6
DENND4A-205ENST00000562540 ZNF483Q8TF39 744 aaPredicted RBP5.05□□□□□ -1.6
DENND4A-205ENST00000562540 ZDHHC5Q9C0B5 715 aa5.05□□□□□ -1.6
DENND4A-205ENST00000562540 MMRN2Q9H8L6 949 aa5.05□□□□□ -1.6
DENND4A-205ENST00000562540 ZNF408Q9H9D4 720 aa5.05□□□□□ -1.6
DENND4A-205ENST00000562540 MSL2Q9HCI7 577 aa5.05□□□□□ -1.6
DENND4A-205ENST00000562540 ARHGEF4Q9NR80 690 aa5.05□□□□□ -1.6
DENND4A-205ENST00000562540 TLR9Q9NR96 1032 aa5.05□□□□□ -1.6
DENND4A-205ENST00000562540 ST7Q9NRC1 585 aa5.05□□□□□ -1.6
DENND4A-205ENST00000562540 KIAA1522Q9P206 1035 aaPredicted RBP5.05□□□□□ -1.6
DENND4A-205ENST00000562540 FBXO10Q9UK96 956 aa5.05□□□□□ -1.6
DENND4A-205ENST00000562540 IQCA1LA6NCM1 817 aa5.04□□□□□ -1.6
DENND4A-205ENST00000562540 U2SURPO15042 1029 aaKnown RBP5.04□□□□□ -1.6
DENND4A-205ENST00000562540 PPFIA2O75334 1257 aa5.04□□□□□ -1.6
DENND4A-205ENST00000562540 PTPN1P18031 435 aaKnown RBP5.04□□□□□ -1.6
DENND4A-205ENST00000562540 DNAJA1P31689 397 aaKnown RBP5.04□□□□□ -1.6
DENND4A-205ENST00000562540 IL13RA1P78552 427 aa5.04□□□□□ -1.6
DENND4A-205ENST00000562540 IFRD2Q12894 506 aaPredicted RBP5.04□□□□□ -1.6
DENND4A-205ENST00000562540 FOXL1Q12952 345 aa5.04□□□□□ -1.6
DENND4A-205ENST00000562540 NSMFQ6X4W1 530 aa5.04□□□□□ -1.6
DENND4A-205ENST00000562540 NLGN4XQ8N0W4 816 aa5.04□□□□□ -1.6
DENND4A-205ENST00000562540 SH3RF2Q8TEC5 729 aa5.04□□□□□ -1.6
DENND4A-205ENST00000562540 HNRNPLLQ8WVV9 542 aaKnown RBP5.04□□□□□ -1.6
DENND4A-205ENST00000562540 OSBP2Q969R2 916 aa5.04□□□□□ -1.6
DENND4A-205ENST00000562540 SRPK3Q9UPE1 567 aa5.04□□□□□ -1.6
DENND4A-205ENST00000562540 FAM90A27PA6NNH2 459 aa5.03□□□□□ -1.6
DENND4A-205ENST00000562540 MAKP20794 623 aa5.03□□□□□ -1.6
DENND4A-205ENST00000562540 PTGS1P23219 599 aa5.03□□□□□ -1.6
DENND4A-205ENST00000562540 HHEXQ03014 270 aa5.03□□□□□ -1.6
DENND4A-205ENST00000562540 GNL2Q13823 731 aaKnown RBP5.03□□□□□ -1.6
DENND4A-205ENST00000562540 USP30Q70CQ3 517 aa5.03□□□□□ -1.6
DENND4A-205ENST00000562540 LARP4Q71RC2 724 aaKnown RBP eCLIP5.03□□□□□ -1.6
DENND4A-205ENST00000562540 DPH6Q7L8W6 267 aa5.03□□□□□ -1.6
DENND4A-205ENST00000562540 LDLRAD3Q86YD5 345 aa5.03□□□□□ -1.6
DENND4A-205ENST00000562540 CFHR4Q92496 578 aa5.03□□□□□ -1.6
DENND4A-205ENST00000562540 INCENPQ9NQS7 918 aa5.03□□□□□ -1.6
DENND4A-205ENST00000562540 AURKAIP1Q9NWT8 199 aaPredicted RBP5.03□□□□□ -1.6
DENND4A-205ENST00000562540 PLA2G3Q9NZ20 509 aa5.03□□□□□ -1.6
DENND4A-205ENST00000562540 TRAV20A0A0B4J274 112 aa5.02□□□□□ -1.61
DENND4A-205ENST00000562540 TCRBV5S4A2TA0A5A2 114 aa5.02□□□□□ -1.61
DENND4A-205ENST00000562540 GJA4P35212 333 aa5.02□□□□□ -1.61
DENND4A-205ENST00000562540 MEOX1P50221 254 aa5.02□□□□□ -1.61
DENND4A-205ENST00000562540 GPR19Q15760 415 aa5.02□□□□□ -1.61
DENND4A-205ENST00000562540 DDR2Q16832 855 aa5.02□□□□□ -1.61
DENND4A-205ENST00000562540 FNDC7Q5VTL7 733 aa5.02□□□□□ -1.61
DENND4A-205ENST00000562540 ARHGAP36Q6ZRI8 547 aa5.02□□□□□ -1.61
DENND4A-205ENST00000562540 EP400NLQ6ZTU2 488 aa5.02□□□□□ -1.61
DENND4A-205ENST00000562540 CXXC5Q7LFL8 322 aaKnown RBP5.02□□□□□ -1.61
DENND4A-205ENST00000562540 OTOP2Q7RTS6 562 aa5.02□□□□□ -1.61
DENND4A-205ENST00000562540 SGMS1Q86VZ5 419 aa5.02□□□□□ -1.61
DENND4A-205ENST00000562540 CELF2-AS1Q8N7Q2 184 aa5.02□□□□□ -1.61
DENND4A-205ENST00000562540 LARP4BQ92615 738 aaKnown RBP5.02□□□□□ -1.61
DENND4A-205ENST00000562540 NELFAQ9H3P2 528 aa5.02□□□□□ -1.61
DENND4A-205ENST00000562540 GALNT8Q9NY28 637 aa5.02□□□□□ -1.61
DENND4A-205ENST00000562540 CDC42EP3Q9UKI2 254 aa5.02□□□□□ -1.61
DENND4A-205ENST00000562540 REXO2Q9Y3B8 237 aaKnown RBP5.02□□□□□ -1.61
DENND4A-205ENST00000562540 ATP23Q9Y6H3 246 aa5.02□□□□□ -1.61
DENND4A-205ENST00000562540 ASXL2Q76L83 1435 aa5.02□□□□□ -1.61
DENND4A-205ENST00000562540 PRAMEF25A6NGN4 478 aa5.01□□□□□ -1.61
DENND4A-205ENST00000562540 FGRP09769 529 aa5.01□□□□□ -1.61
DENND4A-205ENST00000562540 PDE6AP16499 860 aa5.01□□□□□ -1.61
DENND4A-205ENST00000562540 ERCC5P28715 1186 aaPredicted RBP5.01□□□□□ -1.61
DENND4A-205ENST00000562540 PAK1Q13153 545 aa5.01□□□□□ -1.61
DENND4A-205ENST00000562540 GRM7Q14831 915 aa5.01□□□□□ -1.61
DENND4A-205ENST00000562540 EIF4HQ15056 248 aaKnown RBP5.01□□□□□ -1.61
DENND4A-205ENST00000562540 PCOLCEQ15113 449 aa5.01□□□□□ -1.61
DENND4A-205ENST00000562540 FIGNQ5HY92 759 aa5.01□□□□□ -1.61
DENND4A-205ENST00000562540 FILIP1Q7Z7B0 1213 aa5.01□□□□□ -1.61
DENND4A-205ENST00000562540 MRGPRGQ86SM5 289 aa5.01□□□□□ -1.61
DENND4A-205ENST00000562540 MTDHQ86UE4 582 aaKnown RBP5.01□□□□□ -1.61
DENND4A-205ENST00000562540 RTKN2Q8IZC4 609 aa5.01□□□□□ -1.61
DENND4A-205ENST00000562540 D2HGDHQ8N465 521 aa5.01□□□□□ -1.61
DENND4A-205ENST00000562540 OR14K1Q8NGZ2 314 aa5.01□□□□□ -1.61
DENND4A-205ENST00000562540 WDR48Q8TAF3 677 aa5.01□□□□□ -1.61
DENND4A-205ENST00000562540 ZG16BQ96DA0 208 aa5.01□□□□□ -1.61
DENND4A-205ENST00000562540 CRAMP1Q96RY5 1269 aa5.01□□□□□ -1.61
DENND4A-205ENST00000562540 OR10A2Q9H208 303 aa5.01□□□□□ -1.61
DENND4A-205ENST00000562540 GIT1Q9Y2X7 761 aa5.01□□□□□ -1.61
DENND4A-205ENST00000562540 TRAF6Q9Y4K3 522 aa5.01□□□□□ -1.61
DENND4A-205ENST00000562540 CAPN14A8MX76 684 aa5□□□□□ -1.61
DENND4A-205ENST00000562540 E9PSI1 815 aa5□□□□□ -1.61
DENND4A-205ENST00000562540 MAN2B1O00754 1011 aa5□□□□□ -1.61
DENND4A-205ENST00000562540 LMO1P25800 156 aa5□□□□□ -1.61
DENND4A-205ENST00000562540 AOAHP28039 575 aa5□□□□□ -1.61
DENND4A-205ENST00000562540 MC4RP32245 332 aa5□□□□□ -1.61
DENND4A-205ENST00000562540 MRE11P49959 708 aa5□□□□□ -1.61
DENND4A-205ENST00000562540 STILQ15468 1287 aa5□□□□□ -1.61
DENND4A-205ENST00000562540 YOD1Q5VVQ6 348 aaPredicted RBP5□□□□□ -1.61
DENND4A-205ENST00000562540 ADGRE4PQ86SQ3 457 aa5□□□□□ -1.61
DENND4A-205ENST00000562540 PTRH1Q86Y79 214 aaKnown RBP5□□□□□ -1.61
DENND4A-205ENST00000562540 VOPP1Q96AW1 172 aa5□□□□□ -1.61
DENND4A-205ENST00000562540 CLIP3Q96DZ5 547 aa5□□□□□ -1.61
DENND4A-205ENST00000562540 ZNF703Q9H7S9 590 aaPredicted RBP5□□□□□ -1.61
DENND4A-205ENST00000562540 CATSPERZQ9NTU4 200 aa5□□□□□ -1.61
DENND4A-205ENST00000562540 PARPBPQ9NWS1 579 aa5□□□□□ -1.61
DENND4A-205ENST00000562540 CYP27B1O15528 508 aa4.99□□□□□ -1.61
DENND4A-205ENST00000562540 TCF3P15923 654 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms