RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, human

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC28-222	ENST00000561431	NOP58	Q9Y2X3	529 aa	Known RBP	5.38	□□□□□ -1.55
LRRC28-222	ENST00000561431	NUB1	Q9Y5A7	615 aa		5.38	□□□□□ -1.55
LRRC28-222	ENST00000561431	ZMYM3	Q14202	1370 aa		5.38	□□□□□ -1.55
LRRC28-222	ENST00000561431	KIF15	Q9NS87	1388 aa		5.38	□□□□□ -1.55
LRRC28-222	ENST00000561431	UHRF1BP1	Q6BDS2	1440 aa		5.38	□□□□□ -1.55
LRRC28-222	ENST00000561431	ERBIN	Q96RT1	1412 aa		5.38	□□□□□ -1.55
LRRC28-222	ENST00000561431	PZP	P20742	1482 aa		5.38	□□□□□ -1.55
LRRC28-222	ENST00000561431	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	5.38	□□□□□ -1.55
LRRC28-222	ENST00000561431	ADAMTS20	P59510	1910 aa		5.37	□□□□□ -1.55
LRRC28-222	ENST00000561431	LOC102724159	A0A0B4J2E5	919 aa		5.37	□□□□□ -1.55
LRRC28-222	ENST00000561431	GSG1L2	A8MUP6	293 aa		5.37	□□□□□ -1.55
LRRC28-222	ENST00000561431	NUDT19	A8MXV4	375 aa		5.37	□□□□□ -1.55
LRRC28-222	ENST00000561431	KRT37	O76014	449 aa		5.37	□□□□□ -1.55
LRRC28-222	ENST00000561431	MPO	P05164	745 aa		5.37	□□□□□ -1.55
LRRC28-222	ENST00000561431	PDE6A	P16499	860 aa		5.37	□□□□□ -1.55
LRRC28-222	ENST00000561431	HSPA2	P54652	639 aa		5.37	□□□□□ -1.55
LRRC28-222	ENST00000561431	SET	Q01105	290 aa	Predicted RBP	5.37	□□□□□ -1.55
LRRC28-222	ENST00000561431	PWP2	Q15269	919 aa	Known RBP	5.37	□□□□□ -1.55
LRRC28-222	ENST00000561431	PCBP1	Q15365	356 aa	Known RBP eCLIP	5.37	□□□□□ -1.55
LRRC28-222	ENST00000561431	SKOR2	Q2VWA4	1001 aa	Predicted RBP	5.37	□□□□□ -1.55
LRRC28-222	ENST00000561431	TMEM177	Q53S58	311 aa		5.37	□□□□□ -1.55
LRRC28-222	ENST00000561431	STEAP3	Q658P3	488 aa		5.37	□□□□□ -1.55
LRRC28-222	ENST00000561431	PKN3	Q6P5Z2	889 aa		5.37	□□□□□ -1.55
LRRC28-222	ENST00000561431	C16orf59	Q7L2K0	433 aa		5.37	□□□□□ -1.55
LRRC28-222	ENST00000561431	NLRX1	Q86UT6	975 aa		5.37	□□□□□ -1.55
LRRC28-222	ENST00000561431	OSTM1	Q86WC4	334 aa		5.37	□□□□□ -1.55
LRRC28-222	ENST00000561431	DCP2	Q8IU60	420 aa	Known RBP	5.37	□□□□□ -1.55
LRRC28-222	ENST00000561431	MARCH10	Q8NA82	808 aa	Predicted RBP	5.37	□□□□□ -1.55
LRRC28-222	ENST00000561431	OR2W6P	Q8NHA6	318 aa		5.37	□□□□□ -1.55
LRRC28-222	ENST00000561431	PLEKHO2	Q8TD55	490 aa		5.37	□□□□□ -1.55
LRRC28-222	ENST00000561431	USP7	Q93009	1102 aa		5.37	□□□□□ -1.55
LRRC28-222	ENST00000561431	MTA3	Q9BTC8	594 aa		5.37	□□□□□ -1.55
LRRC28-222	ENST00000561431	RNF32	Q9H0A6	362 aa		5.37	□□□□□ -1.55
LRRC28-222	ENST00000561431	CRTAC1	Q9NQ79	661 aa		5.37	□□□□□ -1.55
LRRC28-222	ENST00000561431	RTEL1	Q9NZ71	1219 aa		5.37	□□□□□ -1.55
LRRC28-222	ENST00000561431	MCM8	Q9UJA3	840 aa		5.37	□□□□□ -1.55
LRRC28-222	ENST00000561431	VWDE	Q8N2E2	1590 aa		5.37	□□□□□ -1.55
LRRC28-222	ENST00000561431	CAMSAP1	Q5T5Y3	1602 aa		5.37	□□□□□ -1.55
LRRC28-222	ENST00000561431	CEP152	O94986	1710 aa		5.37	□□□□□ -1.55
LRRC28-222	ENST00000561431	NOTO	A8MTQ0	251 aa		5.36	□□□□□ -1.55
LRRC28-222	ENST00000561431		F8W031	263 aa	Predicted RBP	5.36	□□□□□ -1.55
LRRC28-222	ENST00000561431	KIF3B	O15066	747 aa		5.36	□□□□□ -1.55
LRRC28-222	ENST00000561431	TRIM13	O60858	407 aa		5.36	□□□□□ -1.55
LRRC28-222	ENST00000561431	GLRX3	O76003	335 aa	Known RBP	5.36	□□□□□ -1.55
LRRC28-222	ENST00000561431	TSPY4	P0CV99	314 aa		5.36	□□□□□ -1.55
LRRC28-222	ENST00000561431	TSPY10	P0CW01	314 aa		5.36	□□□□□ -1.55
LRRC28-222	ENST00000561431	SDHB	P21912	280 aa		5.36	□□□□□ -1.55
LRRC28-222	ENST00000561431	IL2	P60568	153 aa		5.36	□□□□□ -1.55
LRRC28-222	ENST00000561431	DLG4	P78352	724 aa		5.36	□□□□□ -1.55
LRRC28-222	ENST00000561431	RAB3GAP1	Q15042	981 aa		5.36	□□□□□ -1.55
LRRC28-222	ENST00000561431	GGT6	Q6P531	493 aa		5.36	□□□□□ -1.55
LRRC28-222	ENST00000561431	ABHD17C	Q6PCB6	329 aa		5.36	□□□□□ -1.55
LRRC28-222	ENST00000561431	ARHGAP36	Q6ZRI8	547 aa		5.36	□□□□□ -1.55
LRRC28-222	ENST00000561431	PIP4K2C	Q8TBX8	421 aa		5.36	□□□□□ -1.55
LRRC28-222	ENST00000561431	PEX11G	Q96HA9	241 aa		5.36	□□□□□ -1.55
LRRC28-222	ENST00000561431	GPATCH3	Q96I76	525 aa		5.36	□□□□□ -1.55
LRRC28-222	ENST00000561431	YIPF4	Q9BSR8	244 aa		5.36	□□□□□ -1.55
LRRC28-222	ENST00000561431	CELF4	Q9BZC1	486 aa	Known RBP	5.36	□□□□□ -1.55
LRRC28-222	ENST00000561431	MCOLN1	Q9GZU1	580 aa		5.36	□□□□□ -1.55
LRRC28-222	ENST00000561431	SLC6A17	Q9H1V8	727 aa		5.36	□□□□□ -1.55
LRRC28-222	ENST00000561431	RXFP1	Q9HBX9	757 aa		5.36	□□□□□ -1.55
LRRC28-222	ENST00000561431	DSE	Q9UL01	958 aa		5.36	□□□□□ -1.55
LRRC28-222	ENST00000561431		X6R8D5	127 aa		5.36	□□□□□ -1.55
LRRC28-222	ENST00000561431	NCOA1	Q15788	1441 aa		5.36	□□□□□ -1.55
LRRC28-222	ENST00000561431	SPATA31D1	Q6ZQQ2	1576 aa		5.36	□□□□□ -1.55
LRRC28-222	ENST00000561431	ZC3H12D	A2A288	527 aa	Known RBP	5.35	□□□□□ -1.55
LRRC28-222	ENST00000561431	HGS	O14964	777 aa	Predicted RBP	5.35	□□□□□ -1.55
LRRC28-222	ENST00000561431	CKM	P06732	381 aa		5.35	□□□□□ -1.55
LRRC28-222	ENST00000561431	VIL1	P09327	827 aa	Known RBP	5.35	□□□□□ -1.55
LRRC28-222	ENST00000561431	TMEM62	Q0P6H9	643 aa		5.35	□□□□□ -1.55
LRRC28-222	ENST00000561431	GPR19	Q15760	415 aa		5.35	□□□□□ -1.55
LRRC28-222	ENST00000561431	ARHGAP44	Q17R89	818 aa		5.35	□□□□□ -1.55
LRRC28-222	ENST00000561431	PAQR3	Q6TCH7	311 aa		5.35	□□□□□ -1.55
LRRC28-222	ENST00000561431	OTOP3	Q7RTS5	596 aa		5.35	□□□□□ -1.55
LRRC28-222	ENST00000561431	PRRT2	Q7Z6L0	340 aa	Predicted RBP	5.35	□□□□□ -1.55
LRRC28-222	ENST00000561431	MILR1	Q7Z6M3	343 aa		5.35	□□□□□ -1.55
LRRC28-222	ENST00000561431	RNF180	Q86T96	592 aa		5.35	□□□□□ -1.55
LRRC28-222	ENST00000561431	C11orf74	Q86VG3	221 aa		5.35	□□□□□ -1.55
LRRC28-222	ENST00000561431	PTRH1	Q86Y79	214 aa	Known RBP	5.35	□□□□□ -1.55
LRRC28-222	ENST00000561431	RIOX2	Q8IUF8	465 aa		5.35	□□□□□ -1.55
LRRC28-222	ENST00000561431	CHST14	Q8NCH0	376 aa		5.35	□□□□□ -1.55
LRRC28-222	ENST00000561431	CXorf38	Q8TB03	319 aa		5.35	□□□□□ -1.55
LRRC28-222	ENST00000561431	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	5.35	□□□□□ -1.55
LRRC28-222	ENST00000561431	CBLC	Q9ULV8	474 aa		5.35	□□□□□ -1.55
LRRC28-222	ENST00000561431	YBX2	Q9Y2T7	364 aa	Known RBP	5.35	□□□□□ -1.55
LRRC28-222	ENST00000561431	SIT1	Q9Y3P8	196 aa		5.35	□□□□□ -1.55
LRRC28-222	ENST00000561431	RIPOR2	Q9Y4F9	1068 aa		5.35	□□□□□ -1.55
LRRC28-222	ENST00000561431	UNC13B	O14795	1591 aa		5.34	□□□□□ -1.55
LRRC28-222	ENST00000561431	LMTK2	Q8IWU2	1503 aa		5.34	□□□□□ -1.55
LRRC28-222	ENST00000561431	A2ML1	A8K2U0	1454 aa		5.34	□□□□□ -1.55
LRRC28-222	ENST00000561431	ERVK-7	P63135	1459 aa		5.34	□□□□□ -1.55
LRRC28-222	ENST00000561431	PLA2R1	Q13018	1463 aa		5.34	□□□□□ -1.55
LRRC28-222	ENST00000561431	ANKRD30A	Q9BXX3	1397 aa		5.34	□□□□□ -1.55
LRRC28-222	ENST00000561431	MYOCOS	A0A1B0GUC4	107 aa		5.34	□□□□□ -1.55
LRRC28-222	ENST00000561431	SLC12A8	A0AV02	714 aa		5.34	□□□□□ -1.55
LRRC28-222	ENST00000561431	PTPDC1	A2A3K4	754 aa		5.34	□□□□□ -1.55
LRRC28-222	ENST00000561431	OR14I1	A6ND48	311 aa		5.34	□□□□□ -1.55
LRRC28-222	ENST00000561431	KCNK3	O14649	394 aa		5.34	□□□□□ -1.55
LRRC28-222	ENST00000561431	WNT9A	O14904	365 aa		5.34	□□□□□ -1.55
LRRC28-222	ENST00000561431	NKRF	O15226	690 aa	Known RBP eCLIP	5.34	□□□□□ -1.55

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