RNA–Protein interactions for RNA: ENST00000561425.5

TPM1-232, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-232ENST00000561425 RSPH3Q86UC2 560 aa23.38■■□□□ 1.33
TPM1-232ENST00000561425 ETNPPLQ8TBG4 499 aa23.38■■□□□ 1.33
TPM1-232ENST00000561425 OXER1Q8TDS5 423 aa23.38■■□□□ 1.33
TPM1-232ENST00000561425 SEPT8Q92599 483 aa23.38■■□□□ 1.33
TPM1-232ENST00000561425 ZBTB10Q96DT7 871 aa23.38■■□□□ 1.33
TPM1-232ENST00000561425 SQORQ9Y6N5 450 aa23.38■■□□□ 1.33
TPM1-232ENST00000561425 COL1A2P08123 1366 aa23.38■■□□□ 1.33
TPM1-232ENST00000561425 SMIM35A0A1B0GVV1 85 aa23.37■■□□□ 1.33
TPM1-232ENST00000561425 WDR64B1ANS9 1081 aa23.37■■□□□ 1.33
TPM1-232ENST00000561425 GJB5O95377 273 aa23.37■■□□□ 1.33
TPM1-232ENST00000561425 INF2Q27J81 1249 aa23.37■■□□□ 1.33
TPM1-232ENST00000561425 ZNF484Q5JVG2 852 aa23.37■■□□□ 1.33
TPM1-232ENST00000561425 PPP4R3AQ6IN85 833 aa23.37■■□□□ 1.33
TPM1-232ENST00000561425 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.37■■□□□ 1.33
TPM1-232ENST00000561425 NME8Q8N427 588 aa23.37■■□□□ 1.33
TPM1-232ENST00000561425 TRAPPC12Q8WVT3 735 aa23.37■■□□□ 1.33
TPM1-232ENST00000561425 BBXQ8WY36 941 aaPredicted RBP23.37■■□□□ 1.33
TPM1-232ENST00000561425 APBB2Q92870 758 aa23.37■■□□□ 1.33
TPM1-232ENST00000561425 DISC1Q9NRI5 854 aa23.37■■□□□ 1.33
TPM1-232ENST00000561425 CDH23Q9H251 3354 aa23.37■■□□□ 1.33
TPM1-232ENST00000561425 IGSF9BQ9UPX0 1349 aa23.36■■□□□ 1.33
TPM1-232ENST00000561425 KIF28PB7ZC32 967 aa23.36■■□□□ 1.33
TPM1-232ENST00000561425 CA3P07451 260 aa23.36■■□□□ 1.33
TPM1-232ENST00000561425 KLRC1P26715 233 aa23.36■■□□□ 1.33
TPM1-232ENST00000561425 SFNP31947 248 aa23.36■■□□□ 1.33
TPM1-232ENST00000561425 LRCH2Q5VUJ6 765 aa23.36■■□□□ 1.33
TPM1-232ENST00000561425 RDM1Q8NG50 284 aa23.36■■□□□ 1.33
TPM1-232ENST00000561425 KDM3AQ9Y4C1 1321 aa23.35■■□□□ 1.33
TPM1-232ENST00000561425 KAT6AQ92794 2004 aa23.35■■□□□ 1.33
TPM1-232ENST00000561425 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.35■■□□□ 1.33
TPM1-232ENST00000561425 JAK2O60674 1132 aa23.35■■□□□ 1.33
TPM1-232ENST00000561425 GAS7O60861 476 aa23.35■■□□□ 1.33
TPM1-232ENST00000561425 ARHGEF15O94989 841 aa23.35■■□□□ 1.33
TPM1-232ENST00000561425 FOSL2P15408 326 aa23.35■■□□□ 1.33
TPM1-232ENST00000561425 MRPS6P82932 125 aaKnown RBP23.35■■□□□ 1.33
TPM1-232ENST00000561425 LPIN1Q14693 890 aa23.35■■□□□ 1.33
TPM1-232ENST00000561425 EARS2Q5JPH6 523 aaKnown RBP23.35■■□□□ 1.33
TPM1-232ENST00000561425 FBXO47Q5MNV8 452 aa23.35■■□□□ 1.33
TPM1-232ENST00000561425 PPP2R2DQ66LE6 453 aa23.35■■□□□ 1.33
TPM1-232ENST00000561425 NEK8Q86SG6 692 aa23.35■■□□□ 1.33
TPM1-232ENST00000561425 GJA10Q969M2 543 aa23.35■■□□□ 1.33
TPM1-232ENST00000561425 RAD9AQ99638 391 aa23.35■■□□□ 1.33
TPM1-232ENST00000561425 TEKT3Q9BXF9 490 aa23.35■■□□□ 1.33
TPM1-232ENST00000561425 UNC45AQ9H3U1 944 aa23.35■■□□□ 1.33
TPM1-232ENST00000561425 PRDM12Q9H4Q4 367 aa23.35■■□□□ 1.33
TPM1-232ENST00000561425 KCNMB3Q9NPA1 279 aa23.35■■□□□ 1.33
TPM1-232ENST00000561425 GABBR1Q9UBS5 961 aa23.35■■□□□ 1.33
TPM1-232ENST00000561425 CDY2AQ9Y6F7 541 aa23.35■■□□□ 1.33
TPM1-232ENST00000561425 GBF1Q92538 1859 aa23.34■■□□□ 1.33
TPM1-232ENST00000561425 CCDC194A0A1B0GVG4 234 aa23.34■■□□□ 1.33
TPM1-232ENST00000561425 ZNF862O60290 1169 aa23.34■■□□□ 1.33
TPM1-232ENST00000561425 GCFC2P16383 781 aaKnown RBP23.34■■□□□ 1.33
TPM1-232ENST00000561425 JAK3P52333 1124 aa23.34■■□□□ 1.33
TPM1-232ENST00000561425 TAP1Q03518 808 aa23.34■■□□□ 1.33
TPM1-232ENST00000561425 IER5Q5VY09 327 aa23.34■■□□□ 1.33
TPM1-232ENST00000561425 TMCO2Q7Z6W1 182 aaPredicted RBP23.34■■□□□ 1.33
TPM1-232ENST00000561425 KIAA0319LQ8IZA0 1049 aa23.34■■□□□ 1.33
TPM1-232ENST00000561425 LLPHQ9BRT6 129 aaKnown RBP23.34■■□□□ 1.33
TPM1-232ENST00000561425 IFIH1Q9BYX4 1025 aaKnown RBP23.34■■□□□ 1.33
TPM1-232ENST00000561425 DDX25Q9UHL0 483 aaKnown RBP23.34■■□□□ 1.33
TPM1-232ENST00000561425 PTPRSQ13332 1948 aa23.33■■□□□ 1.33
TPM1-232ENST00000561425 SLC37A4O43826 429 aa23.33■■□□□ 1.33
TPM1-232ENST00000561425 TLL1O43897 1013 aa23.33■■□□□ 1.33
TPM1-232ENST00000561425 HTRA4P83105 476 aaPredicted RBP23.33■■□□□ 1.33
TPM1-232ENST00000561425 ADGRE1Q14246 886 aa23.33■■□□□ 1.33
TPM1-232ENST00000561425 LETM2Q2VYF4 491 aa23.33■■□□□ 1.33
TPM1-232ENST00000561425 PIK3AP1Q6ZUJ8 805 aa23.33■■□□□ 1.33
TPM1-232ENST00000561425 USP38Q8NB14 1042 aa23.33■■□□□ 1.33
TPM1-232ENST00000561425 TOP1MTQ969P6 601 aa23.33■■□□□ 1.33
TPM1-232ENST00000561425 ZSCAN31Q96LW9 406 aaPredicted RBP23.33■■□□□ 1.33
TPM1-232ENST00000561425 FAM20AQ96MK3 541 aa23.33■■□□□ 1.33
TPM1-232ENST00000561425 TCEAL9Q9UHQ7 104 aa23.33■■□□□ 1.33
TPM1-232ENST00000561425 CHD9Q3L8U1 2897 aa23.33■■□□□ 1.32
TPM1-232ENST00000561425 TBX3O15119 743 aa23.32■■□□□ 1.32
TPM1-232ENST00000561425 STBD1O95210 358 aa23.32■■□□□ 1.32
TPM1-232ENST00000561425 C22orf31O95567 290 aa23.32■■□□□ 1.32
TPM1-232ENST00000561425 MMP1P03956 469 aa23.32■■□□□ 1.32
TPM1-232ENST00000561425 AMHP03971 560 aa23.32■■□□□ 1.32
TPM1-232ENST00000561425 GHRP10912 638 aa23.32■■□□□ 1.32
TPM1-232ENST00000561425 POU3F3P20264 500 aaPredicted RBP23.32■■□□□ 1.32
TPM1-232ENST00000561425 KRT2P35908 639 aa23.32■■□□□ 1.32
TPM1-232ENST00000561425 NR5A1Q13285 461 aa23.32■■□□□ 1.32
TPM1-232ENST00000561425 FAM43BQ6ZT52 329 aaPredicted RBP23.32■■□□□ 1.32
TPM1-232ENST00000561425 LINC01465Q8N7H1 131 aa23.32■■□□□ 1.32
TPM1-232ENST00000561425 IL27Q8NEV9 243 aa23.32■■□□□ 1.32
TPM1-232ENST00000561425 MAFAQ8NHW3 353 aaPredicted RBP23.32■■□□□ 1.32
TPM1-232ENST00000561425 FAM167AQ96KS9 214 aa23.32■■□□□ 1.32
TPM1-232ENST00000561425 NAP1L4Q99733 375 aaKnown RBP23.32■■□□□ 1.32
TPM1-232ENST00000561425 CELF4Q9BZC1 486 aaKnown RBP23.32■■□□□ 1.32
TPM1-232ENST00000561425 FAM49AQ9H0Q0 323 aaPredicted RBP23.32■■□□□ 1.32
TPM1-232ENST00000561425 AGO3Q9H9G7 860 aaKnown RBP23.32■■□□□ 1.32
TPM1-232ENST00000561425 LCHNA4D1U4 455 aa23.31■■□□□ 1.32
TPM1-232ENST00000561425 UGCGQ16739 394 aa23.31■■□□□ 1.32
TPM1-232ENST00000561425 KRT40Q6A162 431 aa23.31■■□□□ 1.32
TPM1-232ENST00000561425 TSHZ1Q6ZSZ6 1077 aa23.31■■□□□ 1.32
TPM1-232ENST00000561425 HAS1Q92839 578 aa23.31■■□□□ 1.32
TPM1-232ENST00000561425 CEP131Q9UPN4 1083 aa23.31■■□□□ 1.32
TPM1-232ENST00000561425 SAMM50Q9Y512 469 aa23.31■■□□□ 1.32
TPM1-232ENST00000561425 TRPV2Q9Y5S1 764 aa23.31■■□□□ 1.32
TPM1-232ENST00000561425 PPP2R5CQ13362 524 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms