RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 EFCAB3Q8N7B9 438 aa8.41□□□□□ -1.06
TPM1-231ENST00000561395 MLKLQ8NB16 471 aa8.41□□□□□ -1.06
TPM1-231ENST00000561395 IL31RAQ8NI17 732 aa8.41□□□□□ -1.06
TPM1-231ENST00000561395 ERMNQ8TAM6 284 aa8.41□□□□□ -1.06
TPM1-231ENST00000561395 STAMQ92783 540 aa8.41□□□□□ -1.06
TPM1-231ENST00000561395 SLC5A5Q92911 643 aa8.41□□□□□ -1.06
TPM1-231ENST00000561395 TRIM43Q96BQ3 446 aaPredicted RBP8.41□□□□□ -1.06
TPM1-231ENST00000561395 TIFAQ96CG3 184 aa8.41□□□□□ -1.06
TPM1-231ENST00000561395 CDK5RAP3Q96JB5 506 aa8.41□□□□□ -1.06
TPM1-231ENST00000561395 NECAB3Q96P71 396 aaPredicted RBP8.41□□□□□ -1.06
TPM1-231ENST00000561395 PLIN2Q99541 437 aa8.41□□□□□ -1.06
TPM1-231ENST00000561395 C7orf25Q9BPX7 421 aa8.41□□□□□ -1.06
TPM1-231ENST00000561395 BLZF1Q9H2G9 400 aa8.41□□□□□ -1.06
TPM1-231ENST00000561395 ACAD9Q9H845 621 aa8.41□□□□□ -1.06
TPM1-231ENST00000561395 PXMP2Q9NR77 195 aa8.41□□□□□ -1.06
TPM1-231ENST00000561395 BLOC1S4Q9NUP1 217 aa8.41□□□□□ -1.06
TPM1-231ENST00000561395 RMND1Q9NWS8 449 aa8.41□□□□□ -1.06
TPM1-231ENST00000561395 DACH1Q9UI36 760 aa8.41□□□□□ -1.06
TPM1-231ENST00000561395 XIRP2A4UGR9 3374 aa8.41□□□□□ -1.06
TPM1-231ENST00000561395 SMTNL1A8MU46 457 aa8.4□□□□□ -1.06
TPM1-231ENST00000561395 KBTBD13C9JR72 458 aa8.4□□□□□ -1.06
TPM1-231ENST00000561395 IKBKBO14920 756 aa8.4□□□□□ -1.06
TPM1-231ENST00000561395 KLRC4O43908 158 aa8.4□□□□□ -1.06
TPM1-231ENST00000561395 PSMD10O75832 226 aa8.4□□□□□ -1.06
TPM1-231ENST00000561395 ADCY5O95622 1261 aa8.4□□□□□ -1.06
TPM1-231ENST00000561395 EIF2AK2P19525 551 aaKnown RBP8.4□□□□□ -1.06
TPM1-231ENST00000561395 CCT6AP40227 531 aaKnown RBP8.4□□□□□ -1.06
TPM1-231ENST00000561395 MYL5Q02045 173 aa8.4□□□□□ -1.06
TPM1-231ENST00000561395 MAP2K5Q13163 448 aa8.4□□□□□ -1.06
TPM1-231ENST00000561395 SEMA3FQ13275 785 aa8.4□□□□□ -1.06
TPM1-231ENST00000561395 PPP2R5CQ13362 524 aa8.4□□□□□ -1.06
TPM1-231ENST00000561395 BAATQ14032 418 aaPredicted RBP8.4□□□□□ -1.06
TPM1-231ENST00000561395 PLS1Q14651 629 aa8.4□□□□□ -1.06
TPM1-231ENST00000561395 NCAPHQ15003 741 aa8.4□□□□□ -1.06
TPM1-231ENST00000561395 PGM5Q15124 567 aa8.4□□□□□ -1.06
TPM1-231ENST00000561395 CT47A1Q5JQC4 288 aaPredicted RBP8.4□□□□□ -1.06
TPM1-231ENST00000561395 LRCH2Q5VUJ6 765 aa8.4□□□□□ -1.06
TPM1-231ENST00000561395 HAUS3Q68CZ6 603 aa8.4□□□□□ -1.06
TPM1-231ENST00000561395 NCAPH2Q6IBW4 605 aa8.4□□□□□ -1.06
TPM1-231ENST00000561395 XRRA1Q6P2D8 792 aa8.4□□□□□ -1.06
TPM1-231ENST00000561395 SARM1Q6SZW1 724 aa8.4□□□□□ -1.06
TPM1-231ENST00000561395 PLEKHH3Q7Z736 793 aa8.4□□□□□ -1.06
TPM1-231ENST00000561395 RIOX2Q8IUF8 465 aa8.4□□□□□ -1.06
TPM1-231ENST00000561395 CHST13Q8NET6 341 aa8.4□□□□□ -1.06
TPM1-231ENST00000561395 LARP4BQ92615 738 aaKnown RBP8.4□□□□□ -1.06
TPM1-231ENST00000561395 RAD54LQ92698 747 aa8.4□□□□□ -1.06
TPM1-231ENST00000561395 SNX27Q96L92 541 aa8.4□□□□□ -1.06
TPM1-231ENST00000561395 TAAR1Q96RJ0 339 aa8.4□□□□□ -1.06
TPM1-231ENST00000561395 UIMC1Q96RL1 719 aa8.4□□□□□ -1.06
TPM1-231ENST00000561395 RMDN3Q96TC7 470 aa8.4□□□□□ -1.06
TPM1-231ENST00000561395 MXRA8Q9BRK3 442 aa8.4□□□□□ -1.06
TPM1-231ENST00000561395 PAGR1Q9BTK6 254 aa8.4□□□□□ -1.06
TPM1-231ENST00000561395 LRFN3Q9BTN0 628 aa8.4□□□□□ -1.06
TPM1-231ENST00000561395 TRIM9Q9C026 710 aa8.4□□□□□ -1.06
TPM1-231ENST00000561395 NT5C3AQ9H0P0 336 aa8.4□□□□□ -1.06
TPM1-231ENST00000561395 CYP39A1Q9NYL5 469 aa8.4□□□□□ -1.06
TPM1-231ENST00000561395 FLRT1Q9NZU1 646 aa8.4□□□□□ -1.06
TPM1-231ENST00000561395 BTBD7Q9P203 1132 aa8.4□□□□□ -1.06
TPM1-231ENST00000561395 UBIAD1Q9Y5Z9 338 aa8.4□□□□□ -1.06
TPM1-231ENST00000561395 KIAA1217Q5T5P2 1943 aa8.39□□□□□ -1.07
TPM1-231ENST00000561395 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.39□□□□□ -1.07
TPM1-231ENST00000561395 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.39□□□□□ -1.07
TPM1-231ENST00000561395 POTEB3A0JP26 581 aa8.39□□□□□ -1.07
TPM1-231ENST00000561395 MED24O75448 989 aa8.39□□□□□ -1.07
TPM1-231ENST00000561395 CNMDO75829 334 aa8.39□□□□□ -1.07
TPM1-231ENST00000561395 ARP10275 920 aa8.39□□□□□ -1.07
TPM1-231ENST00000561395 ITGB5P18084 799 aa8.39□□□□□ -1.07
TPM1-231ENST00000561395 ITGB8P26012 769 aa8.39□□□□□ -1.07
TPM1-231ENST00000561395 CCND2P30279 289 aa8.39□□□□□ -1.07
TPM1-231ENST00000561395 MRPS9P82933 396 aaKnown RBP8.39□□□□□ -1.07
TPM1-231ENST00000561395 AMPD3Q01432 767 aa8.39□□□□□ -1.07
TPM1-231ENST00000561395 MCM6Q14566 821 aa8.39□□□□□ -1.07
TPM1-231ENST00000561395 KCNB1Q14721 858 aa8.39□□□□□ -1.07
TPM1-231ENST00000561395 CCDC85BQ15834 202 aaPredicted RBP8.39□□□□□ -1.07
TPM1-231ENST00000561395 Q3C1V9 767 aa8.39□□□□□ -1.07
TPM1-231ENST00000561395 ARHGEF16Q5VV41 709 aa8.39□□□□□ -1.07
TPM1-231ENST00000561395 CNNM4Q6P4Q7 775 aa8.39□□□□□ -1.07
TPM1-231ENST00000561395 POTEBQ6S5H4 581 aa8.39□□□□□ -1.07
TPM1-231ENST00000561395 SV2BQ7L1I2 683 aa8.39□□□□□ -1.07
TPM1-231ENST00000561395 KCNK18Q7Z418 384 aa8.39□□□□□ -1.07
TPM1-231ENST00000561395 ALYREFQ86V81 257 aaKnown RBP8.39□□□□□ -1.07
TPM1-231ENST00000561395 PDCD2LQ9BRP1 358 aa8.39□□□□□ -1.07
TPM1-231ENST00000561395 ZNF577Q9BSK1 485 aa8.39□□□□□ -1.07
TPM1-231ENST00000561395 POLR3CQ9BUI4 534 aaPredicted RBP8.39□□□□□ -1.07
TPM1-231ENST00000561395 WDR11Q9BZH6 1224 aa8.39□□□□□ -1.07
TPM1-231ENST00000561395 SPATC1LQ9H0A9 340 aa8.39□□□□□ -1.07
TPM1-231ENST00000561395 PRDM12Q9H4Q4 367 aa8.39□□□□□ -1.07
TPM1-231ENST00000561395 A1CFQ9NQ94 594 aaKnown RBP8.39□□□□□ -1.07
TPM1-231ENST00000561395 RBPJLQ9UBG7 517 aa8.39□□□□□ -1.07
TPM1-231ENST00000561395 FBXO40Q9UH90 709 aa8.39□□□□□ -1.07
TPM1-231ENST00000561395 PRRC2BQ5JSZ5 2229 aaKnown RBP8.39□□□□□ -1.07
TPM1-231ENST00000561395 COL4A4P53420 1690 aaPredicted RBP8.38□□□□□ -1.07
TPM1-231ENST00000561395 MYMKA6NI61 221 aa8.38□□□□□ -1.07
TPM1-231ENST00000561395 PPP1R3GB7ZBB8 358 aa8.38□□□□□ -1.07
TPM1-231ENST00000561395 IPO5O00410 1097 aaKnown RBP8.38□□□□□ -1.07
TPM1-231ENST00000561395 EML1O00423 815 aa8.38□□□□□ -1.07
TPM1-231ENST00000561395 GAS7O60861 476 aa8.38□□□□□ -1.07
TPM1-231ENST00000561395 RHOBTB3O94955 611 aa8.38□□□□□ -1.07
TPM1-231ENST00000561395 SPATA31C1P0DKV0 1188 aa8.38□□□□□ -1.07
TPM1-231ENST00000561395 CYBAP13498 195 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms