RNA–Protein interactions for RNA: ENST00000561367.1

KNSTRN-215, Transcript of kinetochore localized astrin (SPAG5) binding protein, human

TSL 2

Gene KNSTRN, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KNSTRN-215	ENST00000561367	STK38	Q15208	465 aa		11.14	□□□□□ -0.63
KNSTRN-215	ENST00000561367	MTFR1	Q15390	333 aa		11.14	□□□□□ -0.63
KNSTRN-215	ENST00000561367	GNAS	Q5JWF2	1037 aa		11.14	□□□□□ -0.63
KNSTRN-215	ENST00000561367	MIS18BP1	Q6P0N0	1132 aa		11.14	□□□□□ -0.63
KNSTRN-215	ENST00000561367	LINC00301	Q8NCQ3	95 aa		11.14	□□□□□ -0.63
KNSTRN-215	ENST00000561367	KLHDC9	Q8NEP7	349 aa		11.14	□□□□□ -0.63
KNSTRN-215	ENST00000561367	ERMN	Q8TAM6	284 aa		11.14	□□□□□ -0.63
KNSTRN-215	ENST00000561367	U2AF1L4	Q8WU68	220 aa	Known RBP	11.14	□□□□□ -0.63
KNSTRN-215	ENST00000561367	USP28	Q96RU2	1077 aa		11.14	□□□□□ -0.63
KNSTRN-215	ENST00000561367	GPR20	Q99678	358 aa		11.14	□□□□□ -0.63
KNSTRN-215	ENST00000561367	KATNAL1	Q9BW62	490 aa		11.14	□□□□□ -0.63
KNSTRN-215	ENST00000561367	ZNF215	Q9UL58	517 aa	Predicted RBP	11.14	□□□□□ -0.63
KNSTRN-215	ENST00000561367	PCDHA10	Q9Y5I2	948 aa		11.14	□□□□□ -0.63
KNSTRN-215	ENST00000561367	IGKV6D-21	A0A0A0MT36	114 aa		11.13	□□□□□ -0.63
KNSTRN-215	ENST00000561367	KBTBD13	C9JR72	458 aa		11.13	□□□□□ -0.63
KNSTRN-215	ENST00000561367	WNT7A	O00755	349 aa		11.13	□□□□□ -0.63
KNSTRN-215	ENST00000561367	SPTLC2	O15270	562 aa		11.13	□□□□□ -0.63
KNSTRN-215	ENST00000561367	MMP3	P08254	477 aa		11.13	□□□□□ -0.63
KNSTRN-215	ENST00000561367	CFH	P08603	1231 aa		11.13	□□□□□ -0.63
KNSTRN-215	ENST00000561367	ACTR2	P61160	394 aa		11.13	□□□□□ -0.63
KNSTRN-215	ENST00000561367	DNM1	Q05193	864 aa	Known RBP	11.13	□□□□□ -0.63
KNSTRN-215	ENST00000561367	SPIRE1	Q08AE8	756 aa		11.13	□□□□□ -0.63
KNSTRN-215	ENST00000561367	PTPA	Q15257	358 aa		11.13	□□□□□ -0.63
KNSTRN-215	ENST00000561367	LRRC41	Q15345	812 aa		11.13	□□□□□ -0.63
KNSTRN-215	ENST00000561367	EPHA7	Q15375	998 aa		11.13	□□□□□ -0.63
KNSTRN-215	ENST00000561367	HSDL1	Q3SXM5	330 aa		11.13	□□□□□ -0.63
KNSTRN-215	ENST00000561367	FOXD4L5	Q5VV16	416 aa	Predicted RBP	11.13	□□□□□ -0.63
KNSTRN-215	ENST00000561367	FAM160B1	Q5W0V3	765 aa		11.13	□□□□□ -0.63
KNSTRN-215	ENST00000561367	HAUS3	Q68CZ6	603 aa		11.13	□□□□□ -0.63
KNSTRN-215	ENST00000561367	BLOC1S3	Q6QNY0	202 aa		11.13	□□□□□ -0.63
KNSTRN-215	ENST00000561367	PLPPR4	Q7Z2D5	763 aa		11.13	□□□□□ -0.63
KNSTRN-215	ENST00000561367	IGSF22	Q8N9C0	903 aa		11.13	□□□□□ -0.63
KNSTRN-215	ENST00000561367	KRI1	Q8N9T8	703 aa	Known RBP	11.13	□□□□□ -0.63
KNSTRN-215	ENST00000561367	AFAP1L1	Q8TED9	768 aa		11.13	□□□□□ -0.63
KNSTRN-215	ENST00000561367	AFG1L	Q8WV93	481 aa		11.13	□□□□□ -0.63
KNSTRN-215	ENST00000561367	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	11.13	□□□□□ -0.63
KNSTRN-215	ENST00000561367	TMEM60	Q9H2L4	133 aa		11.13	□□□□□ -0.63
KNSTRN-215	ENST00000561367	SMARCAD1	Q9H4L7	1026 aa		11.13	□□□□□ -0.63
KNSTRN-215	ENST00000561367	AZI2	Q9H6S1	392 aa		11.13	□□□□□ -0.63
KNSTRN-215	ENST00000561367	DISC1	Q9NRI5	854 aa		11.13	□□□□□ -0.63
KNSTRN-215	ENST00000561367	RCOR1	Q9UKL0	485 aa		11.13	□□□□□ -0.63
KNSTRN-215	ENST00000561367	VAV3	Q9UKW4	847 aa		11.13	□□□□□ -0.63
KNSTRN-215	ENST00000561367	SRPRB	Q9Y5M8	271 aa	Known RBP	11.13	□□□□□ -0.63
KNSTRN-215	ENST00000561367	CLIC4	Q9Y696	253 aa		11.13	□□□□□ -0.63
KNSTRN-215	ENST00000561367	CTAGE5	O15320	804 aa		11.12	□□□□□ -0.63
KNSTRN-215	ENST00000561367	LGR5	O75473	907 aa		11.12	□□□□□ -0.63
KNSTRN-215	ENST00000561367	PGK1	P00558	417 aa		11.12	□□□□□ -0.63
KNSTRN-215	ENST00000561367	TFRC	P02786	760 aa	Known RBP	11.12	□□□□□ -0.63
KNSTRN-215	ENST00000561367	P4HB	P07237	508 aa	Known RBP	11.12	□□□□□ -0.63
KNSTRN-215	ENST00000561367	SUPT20HL2	P0C7V6	817 aa		11.12	□□□□□ -0.63
KNSTRN-215	ENST00000561367	TCF7	P36402	384 aa	Predicted RBP	11.12	□□□□□ -0.63
KNSTRN-215	ENST00000561367	COL13A1	Q5TAT6	717 aa	Predicted RBP	11.12	□□□□□ -0.63
KNSTRN-215	ENST00000561367	CCSAP	Q6IQ19	270 aa	Predicted RBP	11.12	□□□□□ -0.63
KNSTRN-215	ENST00000561367	FAM173B	Q6P4H8	233 aa		11.12	□□□□□ -0.63
KNSTRN-215	ENST00000561367	ABHD15	Q6UXT9	468 aa		11.12	□□□□□ -0.63
KNSTRN-215	ENST00000561367	CLEC17A	Q6ZS10	378 aa		11.12	□□□□□ -0.63
KNSTRN-215	ENST00000561367	MIER3	Q7Z3K6	550 aa		11.12	□□□□□ -0.63
KNSTRN-215	ENST00000561367	COPS5	Q92905	334 aa		11.12	□□□□□ -0.63
KNSTRN-215	ENST00000561367	ATP6V0A1	Q93050	837 aa		11.12	□□□□□ -0.63
KNSTRN-215	ENST00000561367	FAM167A	Q96KS9	214 aa		11.12	□□□□□ -0.63
KNSTRN-215	ENST00000561367	SPATA32	Q96LK8	384 aa		11.12	□□□□□ -0.63
KNSTRN-215	ENST00000561367	UNC45A	Q9H3U1	944 aa		11.12	□□□□□ -0.63
KNSTRN-215	ENST00000561367	ERAP1	Q9NZ08	941 aa		11.12	□□□□□ -0.63
KNSTRN-215	ENST00000561367	PKD2L1	Q9P0L9	805 aa		11.12	□□□□□ -0.63
KNSTRN-215	ENST00000561367	LRWD1	Q9UFC0	647 aa		11.12	□□□□□ -0.63
KNSTRN-215	ENST00000561367	PHF24	Q9UPV7	400 aa		11.12	□□□□□ -0.63
KNSTRN-215	ENST00000561367	SAMM50	Q9Y512	469 aa		11.12	□□□□□ -0.63
KNSTRN-215	ENST00000561367	GSTTP1	A0A1W2PQM5	241 aa		11.11	□□□□□ -0.63
KNSTRN-215	ENST00000561367	CCNE2	O96020	404 aa		11.11	□□□□□ -0.63
KNSTRN-215	ENST00000561367	F2	P00734	622 aa		11.11	□□□□□ -0.63
KNSTRN-215	ENST00000561367	TXLNA	P40222	546 aa		11.11	□□□□□ -0.63
KNSTRN-215	ENST00000561367	TEC	P42680	631 aa		11.11	□□□□□ -0.63
KNSTRN-215	ENST00000561367	STAT5B	P51692	787 aa		11.11	□□□□□ -0.63
KNSTRN-215	ENST00000561367	PSMC5	P62195	406 aa		11.11	□□□□□ -0.63
KNSTRN-215	ENST00000561367	PURA	Q00577	322 aa	Known RBP	11.11	□□□□□ -0.63
KNSTRN-215	ENST00000561367	GJC2	Q5T442	439 aa	Predicted RBP	11.11	□□□□□ -0.63
KNSTRN-215	ENST00000561367	KRT79	Q5XKE5	535 aa		11.11	□□□□□ -0.63
KNSTRN-215	ENST00000561367	ABHD8	Q96I13	439 aa		11.11	□□□□□ -0.63
KNSTRN-215	ENST00000561367	GLT1D1	Q96MS3	346 aa		11.11	□□□□□ -0.63
KNSTRN-215	ENST00000561367	MTG1	Q9BT17	334 aa	Predicted RBP	11.11	□□□□□ -0.63
KNSTRN-215	ENST00000561367	POLR3C	Q9BUI4	534 aa	Predicted RBP	11.11	□□□□□ -0.63
KNSTRN-215	ENST00000561367	NT5C3A	Q9H0P0	336 aa		11.11	□□□□□ -0.63
KNSTRN-215	ENST00000561367	TUFT1	Q9NNX1	390 aa		11.11	□□□□□ -0.63
KNSTRN-215	ENST00000561367	TFIP11	Q9UBB9	837 aa	Known RBP	11.11	□□□□□ -0.63
KNSTRN-215	ENST00000561367	PPME1	Q9Y570	386 aa		11.11	□□□□□ -0.63
KNSTRN-215	ENST00000561367	PCDHB3	Q9Y5E6	796 aa		11.11	□□□□□ -0.63
KNSTRN-215	ENST00000561367	MAFB	Q9Y5Q3	323 aa	Predicted RBP	11.11	□□□□□ -0.63
KNSTRN-215	ENST00000561367	KDM3A	Q9Y4C1	1321 aa		11.1	□□□□□ -0.63
KNSTRN-215	ENST00000561367	VWA3A	A6NCI4	1184 aa		11.1	□□□□□ -0.63
KNSTRN-215	ENST00000561367		H3BRB1	525 aa		11.1	□□□□□ -0.63
KNSTRN-215	ENST00000561367	DDX39A	O00148	427 aa	Known RBP	11.1	□□□□□ -0.63
KNSTRN-215	ENST00000561367	BACH1	O14867	736 aa		11.1	□□□□□ -0.63
KNSTRN-215	ENST00000561367	ACTN4	O43707	911 aa	Known RBP	11.1	□□□□□ -0.63
KNSTRN-215	ENST00000561367	CUTA	O60888	179 aa		11.1	□□□□□ -0.63
KNSTRN-215	ENST00000561367	LYPLA2	O95372	231 aa		11.1	□□□□□ -0.63
KNSTRN-215	ENST00000561367	LGALS2	P05162	132 aa		11.1	□□□□□ -0.63
KNSTRN-215	ENST00000561367	ASGR1	P07306	291 aa		11.1	□□□□□ -0.63
KNSTRN-215	ENST00000561367	XRCC6	P12956	609 aa	Known RBP eCLIP	11.1	□□□□□ -0.63
KNSTRN-215	ENST00000561367	NCL	P19338	710 aa	Known RBP	11.1	□□□□□ -0.63
KNSTRN-215	ENST00000561367	RPA1	P27694	616 aa		11.1	□□□□□ -0.63

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