RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 KDM3AQ9Y4C1 1321 aa13.53□□□□□ -0.24
CARMIL3-204ENST00000561354 MUC6Q6W4X9 2439 aa13.53□□□□□ -0.24
CARMIL3-204ENST00000561354 SMIM35A0A1B0GVV1 85 aa13.52□□□□□ -0.25
CARMIL3-204ENST00000561354 hCG_1642624A0A1W2PR95 340 aa13.52□□□□□ -0.25
CARMIL3-204ENST00000561354 SLC27A2O14975 620 aa13.52□□□□□ -0.25
CARMIL3-204ENST00000561354 ATG7O95352 703 aa13.52□□□□□ -0.25
CARMIL3-204ENST00000561354 EYA4O95677 639 aa13.52□□□□□ -0.25
CARMIL3-204ENST00000561354 ITGB1P05556 798 aa13.52□□□□□ -0.25
CARMIL3-204ENST00000561354 GTF2F1P35269 517 aaKnown RBP eCLIP13.52□□□□□ -0.25
CARMIL3-204ENST00000561354 SLC26A2P50443 739 aa13.52□□□□□ -0.25
CARMIL3-204ENST00000561354 STAT5BP51692 787 aa13.52□□□□□ -0.25
CARMIL3-204ENST00000561354 ACTR2P61160 394 aa13.52□□□□□ -0.25
CARMIL3-204ENST00000561354 PAK2Q13177 524 aa13.52□□□□□ -0.25
CARMIL3-204ENST00000561354 COL9A3Q14050 684 aaPredicted RBP13.52□□□□□ -0.25
CARMIL3-204ENST00000561354 NECTIN1Q15223 517 aa13.52□□□□□ -0.25
CARMIL3-204ENST00000561354 HERC4Q5GLZ8 1057 aaPredicted RBP13.52□□□□□ -0.25
CARMIL3-204ENST00000561354 HEATR3Q7Z4Q2 680 aa13.52□□□□□ -0.25
CARMIL3-204ENST00000561354 CCDC82Q8N4S0 544 aa13.52□□□□□ -0.25
CARMIL3-204ENST00000561354 CYP2W1Q8TAV3 490 aa13.52□□□□□ -0.25
CARMIL3-204ENST00000561354 SPPL3Q8TCT6 385 aa13.52□□□□□ -0.25
CARMIL3-204ENST00000561354 ZBTB10Q96DT7 871 aa13.52□□□□□ -0.25
CARMIL3-204ENST00000561354 MSLNLQ96KJ4 702 aa13.52□□□□□ -0.25
CARMIL3-204ENST00000561354 IGFLR1Q9H665 355 aa13.52□□□□□ -0.25
CARMIL3-204ENST00000561354 LINC01565O15544 149 aa13.51□□□□□ -0.25
CARMIL3-204ENST00000561354 FOSP01100 380 aaPredicted RBP13.51□□□□□ -0.25
CARMIL3-204ENST00000561354 SCG2P13521 617 aa13.51□□□□□ -0.25
CARMIL3-204ENST00000561354 DNAJB1P25685 340 aa13.51□□□□□ -0.25
CARMIL3-204ENST00000561354 KRT76Q01546 638 aa13.51□□□□□ -0.25
CARMIL3-204ENST00000561354 TMEM62Q0P6H9 643 aa13.51□□□□□ -0.25
CARMIL3-204ENST00000561354 CLUL1Q15846 466 aa13.51□□□□□ -0.25
CARMIL3-204ENST00000561354 CEP55Q53EZ4 464 aa13.51□□□□□ -0.25
CARMIL3-204ENST00000561354 PPP1R18Q6NYC8 613 aa13.51□□□□□ -0.25
CARMIL3-204ENST00000561354 EFHBQ8N7U6 833 aa13.51□□□□□ -0.25
CARMIL3-204ENST00000561354 KLHL23Q8NBE8 558 aa13.51□□□□□ -0.25
CARMIL3-204ENST00000561354 TRAPPC12Q8WVT3 735 aa13.51□□□□□ -0.25
CARMIL3-204ENST00000561354 RIC8AQ9NPQ8 531 aa13.51□□□□□ -0.25
CARMIL3-204ENST00000561354 IGKV6D-21A0A0A0MT36 114 aa13.5□□□□□ -0.25
CARMIL3-204ENST00000561354 STXBP3O00186 592 aa13.5□□□□□ -0.25
CARMIL3-204ENST00000561354 MEIS1O00470 390 aa13.5□□□□□ -0.25
CARMIL3-204ENST00000561354 ARP10275 920 aa13.5□□□□□ -0.25
CARMIL3-204ENST00000561354 NDUFV1P49821 464 aa13.5□□□□□ -0.25
CARMIL3-204ENST00000561354 COASYQ13057 564 aa13.5□□□□□ -0.25
CARMIL3-204ENST00000561354 ITGB3BPQ13352 177 aaPredicted RBP13.5□□□□□ -0.25
CARMIL3-204ENST00000561354 CREB3L3Q68CJ9 461 aa13.5□□□□□ -0.25
CARMIL3-204ENST00000561354 WWC2Q6AWC2 1192 aa13.5□□□□□ -0.25
CARMIL3-204ENST00000561354 MTHFD1LQ6UB35 978 aa13.5□□□□□ -0.25
CARMIL3-204ENST00000561354 SYNE3Q6ZMZ3 975 aa13.5□□□□□ -0.25
CARMIL3-204ENST00000561354 ALYREFQ86V81 257 aaKnown RBP13.5□□□□□ -0.25
CARMIL3-204ENST00000561354 MICU3Q86XE3 530 aa13.5□□□□□ -0.25
CARMIL3-204ENST00000561354 RAB11FIP4Q86YS3 637 aa13.5□□□□□ -0.25
CARMIL3-204ENST00000561354 RNF135Q8IUD6 432 aa13.5□□□□□ -0.25
CARMIL3-204ENST00000561354 POF1BQ8WVV4 589 aa13.5□□□□□ -0.25
CARMIL3-204ENST00000561354 FBXL18Q96ME1 805 aa13.5□□□□□ -0.25
CARMIL3-204ENST00000561354 TMX1Q9H3N1 280 aa13.5□□□□□ -0.25
CARMIL3-204ENST00000561354 AGO4Q9HCK5 861 aaKnown RBP13.5□□□□□ -0.25
CARMIL3-204ENST00000561354 RBM28Q9NW13 759 aaKnown RBP13.5□□□□□ -0.25
CARMIL3-204ENST00000561354 RNF216Q9NWF9 866 aaPredicted RBP13.5□□□□□ -0.25
CARMIL3-204ENST00000561354 CLEC1BQ9P126 229 aa13.5□□□□□ -0.25
CARMIL3-204ENST00000561354 MUTYHQ9UIF7 546 aa13.5□□□□□ -0.25
CARMIL3-204ENST00000561354 LRFN2Q9ULH4 789 aa13.5□□□□□ -0.25
CARMIL3-204ENST00000561354 CNTNAP5Q8WYK1 1306 aa13.49□□□□□ -0.25
CARMIL3-204ENST00000561354 hCG_1984214I3L0E3 225 aa13.49□□□□□ -0.25
CARMIL3-204ENST00000561354 HBP1O60381 514 aa13.49□□□□□ -0.25
CARMIL3-204ENST00000561354 CSPG5O95196 566 aa13.49□□□□□ -0.25
CARMIL3-204ENST00000561354 KLRC1P26715 233 aa13.49□□□□□ -0.25
CARMIL3-204ENST00000561354 SARSP49591 514 aaKnown RBP13.49□□□□□ -0.25
CARMIL3-204ENST00000561354 NAPAP54920 295 aa13.49□□□□□ -0.25
CARMIL3-204ENST00000561354 UBE3AQ05086 875 aa13.49□□□□□ -0.25
CARMIL3-204ENST00000561354 AP3B2Q13367 1082 aa13.49□□□□□ -0.25
CARMIL3-204ENST00000561354 PAN2Q504Q3 1202 aaKnown RBP13.49□□□□□ -0.25
CARMIL3-204ENST00000561354 TYW1BQ6NUM6 668 aa13.49□□□□□ -0.25
CARMIL3-204ENST00000561354 HFE2Q6ZVN8 426 aa13.49□□□□□ -0.25
CARMIL3-204ENST00000561354 NIPA1Q7RTP0 329 aa13.49□□□□□ -0.25
CARMIL3-204ENST00000561354 ADGRD2Q7Z7M1 963 aa13.49□□□□□ -0.25
CARMIL3-204ENST00000561354 ZNF713Q8N859 430 aaPredicted RBP13.49□□□□□ -0.25
CARMIL3-204ENST00000561354 SMRP1Q8NCR6 262 aa13.49□□□□□ -0.25
CARMIL3-204ENST00000561354 MFSD14AQ96MC6 490 aa13.49□□□□□ -0.25
CARMIL3-204ENST00000561354 ESYT1Q9BSJ8 1104 aa13.49□□□□□ -0.25
CARMIL3-204ENST00000561354 LRRC2Q9BYS8 371 aa13.49□□□□□ -0.25
CARMIL3-204ENST00000561354 ANO3Q9BYT9 981 aa13.49□□□□□ -0.25
CARMIL3-204ENST00000561354 GLT8D2Q9H1C3 349 aa13.49□□□□□ -0.25
CARMIL3-204ENST00000561354 PCDHB7Q9Y5E2 793 aa13.49□□□□□ -0.25
CARMIL3-204ENST00000561354 KIAA1671Q9BY89 1806 aa13.48□□□□□ -0.25
CARMIL3-204ENST00000561354 COL1A2P08123 1366 aa13.48□□□□□ -0.25
CARMIL3-204ENST00000561354 PIEZO1Q92508 2521 aa13.48□□□□□ -0.25
CARMIL3-204ENST00000561354 CCNE2O96020 404 aa13.48□□□□□ -0.25
CARMIL3-204ENST00000561354 SREBF1P36956 1147 aa13.48□□□□□ -0.25
CARMIL3-204ENST00000561354 ADCY7P51828 1080 aa13.48□□□□□ -0.25
CARMIL3-204ENST00000561354 NHLH1Q02575 133 aa13.48□□□□□ -0.25
CARMIL3-204ENST00000561354 FUT2Q10981 343 aa13.48□□□□□ -0.25
CARMIL3-204ENST00000561354 NFX1Q12986 1120 aaKnown RBP13.48□□□□□ -0.25
CARMIL3-204ENST00000561354 TMEM266Q2M3C6 531 aa13.48□□□□□ -0.25
CARMIL3-204ENST00000561354 ODR4Q5SWX8 454 aa13.48□□□□□ -0.25
CARMIL3-204ENST00000561354 FAM160B1Q5W0V3 765 aa13.48□□□□□ -0.25
CARMIL3-204ENST00000561354 APOA5Q6Q788 366 aa13.48□□□□□ -0.25
CARMIL3-204ENST00000561354 ABHD15Q6UXT9 468 aa13.48□□□□□ -0.25
CARMIL3-204ENST00000561354 BMP8AQ7Z5Y6 402 aa13.48□□□□□ -0.25
CARMIL3-204ENST00000561354 KIAA0319LQ8IZA0 1049 aa13.48□□□□□ -0.25
CARMIL3-204ENST00000561354 ATP8B4Q8TF62 1192 aa13.48□□□□□ -0.25
CARMIL3-204ENST00000561354 EDAQ92838 391 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms