RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 NEMFO60524 1076 aa11.4□□□□□ -0.58
HERC1-212ENST00000561348 ATG7O95352 703 aa11.4□□□□□ -0.58
HERC1-212ENST00000561348 HSP90AA1P07900 732 aaKnown RBP11.4□□□□□ -0.58
HERC1-212ENST00000561348 CYP3A7P24462 503 aa11.4□□□□□ -0.58
HERC1-212ENST00000561348 KLRC1P26715 233 aa11.4□□□□□ -0.58
HERC1-212ENST00000561348 JAK3P52333 1124 aa11.4□□□□□ -0.58
HERC1-212ENST00000561348 MOXD1Q6UVY6 613 aa11.4□□□□□ -0.58
HERC1-212ENST00000561348 RSPH3Q86UC2 560 aa11.4□□□□□ -0.58
HERC1-212ENST00000561348 ATP8B4Q8TF62 1192 aa11.4□□□□□ -0.58
HERC1-212ENST00000561348 SH2D3AQ9BRG2 576 aa11.4□□□□□ -0.58
HERC1-212ENST00000561348 NRBP2Q9NSY0 501 aa11.4□□□□□ -0.58
HERC1-212ENST00000561348 CXXC1Q9P0U4 656 aaPredicted RBP11.4□□□□□ -0.58
HERC1-212ENST00000561348 SEPT9Q9UHD8 586 aaPredicted RBP11.4□□□□□ -0.58
HERC1-212ENST00000561348 NOL7Q9UMY1 257 aaKnown RBP11.4□□□□□ -0.58
HERC1-212ENST00000561348 SLC4A7Q9Y6M7 1214 aa11.4□□□□□ -0.58
HERC1-212ENST00000561348 VPS37CA5D8V6 355 aaPredicted RBP11.39□□□□□ -0.59
HERC1-212ENST00000561348 DDX11L8A8MPP1 907 aa11.39□□□□□ -0.59
HERC1-212ENST00000561348 KIF28PB7ZC32 967 aa11.39□□□□□ -0.59
HERC1-212ENST00000561348 M0QZ92 97 aa11.39□□□□□ -0.59
HERC1-212ENST00000561348 WNT7AO00755 349 aa11.39□□□□□ -0.59
HERC1-212ENST00000561348 PSMD10O75832 226 aa11.39□□□□□ -0.59
HERC1-212ENST00000561348 SFNP31947 248 aa11.39□□□□□ -0.59
HERC1-212ENST00000561348 RFC2P35250 354 aa11.39□□□□□ -0.59
HERC1-212ENST00000561348 KCNJ6P48051 423 aa11.39□□□□□ -0.59
HERC1-212ENST00000561348 SLC26A2P50443 739 aa11.39□□□□□ -0.59
HERC1-212ENST00000561348 PRKCEQ02156 737 aa11.39□□□□□ -0.59
HERC1-212ENST00000561348 CYP4A11Q02928 519 aa11.39□□□□□ -0.59
HERC1-212ENST00000561348 NBR1Q14596 966 aa11.39□□□□□ -0.59
HERC1-212ENST00000561348 UGCGQ16739 394 aa11.39□□□□□ -0.59
HERC1-212ENST00000561348 MTERF2Q49AM1 385 aa11.39□□□□□ -0.59
HERC1-212ENST00000561348 LARP1BQ659C4 914 aaKnown RBP11.39□□□□□ -0.59
HERC1-212ENST00000561348 FAM109BQ6ICB4 259 aaPredicted RBP11.39□□□□□ -0.59
HERC1-212ENST00000561348 PPP4R3AQ6IN85 833 aa11.39□□□□□ -0.59
HERC1-212ENST00000561348 FAM117BQ6P1L5 589 aa11.39□□□□□ -0.59
HERC1-212ENST00000561348 Q7L0L9 218 aa11.39□□□□□ -0.59
HERC1-212ENST00000561348 SPRYD3Q8NCJ5 442 aa11.39□□□□□ -0.59
HERC1-212ENST00000561348 ETNPPLQ8TBG4 499 aa11.39□□□□□ -0.59
HERC1-212ENST00000561348 TNFRSF25Q93038 417 aa11.39□□□□□ -0.59
HERC1-212ENST00000561348 SUGCTQ9HAC7 445 aa11.39□□□□□ -0.59
HERC1-212ENST00000561348 PCDHA12Q9UN75 941 aa11.39□□□□□ -0.59
HERC1-212ENST00000561348 IGKV6D-21A0A0A0MT36 114 aa11.38□□□□□ -0.59
HERC1-212ENST00000561348 TMEM150BA6NC51 233 aa11.38□□□□□ -0.59
HERC1-212ENST00000561348 EML1O00423 815 aa11.38□□□□□ -0.59
HERC1-212ENST00000561348 NBNO60934 754 aa11.38□□□□□ -0.59
HERC1-212ENST00000561348 OATP04181 439 aa11.38□□□□□ -0.59
HERC1-212ENST00000561348 GHRP10912 638 aa11.38□□□□□ -0.59
HERC1-212ENST00000561348 ATP4AP20648 1035 aa11.38□□□□□ -0.59
HERC1-212ENST00000561348 RABGGTBP53611 331 aa11.38□□□□□ -0.59
HERC1-212ENST00000561348 TRIM71Q2Q1W2 868 aaKnown RBP11.38□□□□□ -0.59
HERC1-212ENST00000561348 LRIT3Q3SXY7 679 aa11.38□□□□□ -0.59
HERC1-212ENST00000561348 ZNF484Q5JVG2 852 aa11.38□□□□□ -0.59
HERC1-212ENST00000561348 TTC38Q5R3I4 469 aa11.38□□□□□ -0.59
HERC1-212ENST00000561348 MARCH8Q5T0T0 291 aa11.38□□□□□ -0.59
HERC1-212ENST00000561348 TAF2Q6P1X5 1199 aa11.38□□□□□ -0.59
HERC1-212ENST00000561348 MTHFD1LQ6UB35 978 aa11.38□□□□□ -0.59
HERC1-212ENST00000561348 TMCO2Q7Z6W1 182 aaPredicted RBP11.38□□□□□ -0.59
HERC1-212ENST00000561348 NOSTRINQ8IVI9 506 aa11.38□□□□□ -0.59
HERC1-212ENST00000561348 HSCBQ8IWL3 235 aa11.38□□□□□ -0.59
HERC1-212ENST00000561348 TPH2Q8IWU9 490 aa11.38□□□□□ -0.59
HERC1-212ENST00000561348 SLFN12Q8IYM2 578 aa11.38□□□□□ -0.59
HERC1-212ENST00000561348 BBXQ8WY36 941 aaPredicted RBP11.38□□□□□ -0.59
HERC1-212ENST00000561348 ZNF668Q96K58 619 aaPredicted RBP11.38□□□□□ -0.59
HERC1-212ENST00000561348 FAM20AQ96MK3 541 aa11.38□□□□□ -0.59
HERC1-212ENST00000561348 MBOAT7Q96N66 472 aa11.38□□□□□ -0.59
HERC1-212ENST00000561348 SCLT1Q96NL6 688 aa11.38□□□□□ -0.59
HERC1-212ENST00000561348 ZBED2Q9BTP6 218 aa11.38□□□□□ -0.59
HERC1-212ENST00000561348 FOXP1Q9H334 677 aaPredicted RBP11.38□□□□□ -0.59
HERC1-212ENST00000561348 TTC12Q9H892 705 aaPredicted RBP11.38□□□□□ -0.59
HERC1-212ENST00000561348 BMP2KQ9NSY1 1161 aaPredicted RBP11.38□□□□□ -0.59
HERC1-212ENST00000561348 CDY2AQ9Y6F7 541 aa11.38□□□□□ -0.59
HERC1-212ENST00000561348 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.37□□□□□ -0.59
HERC1-212ENST00000561348 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.37□□□□□ -0.59
HERC1-212ENST00000561348 ZNF862O60290 1169 aa11.37□□□□□ -0.59
HERC1-212ENST00000561348 UPP2O95045 317 aa11.37□□□□□ -0.59
HERC1-212ENST00000561348 PFKMP08237 780 aa11.37□□□□□ -0.59
HERC1-212ENST00000561348 ATP2A2P16615 1042 aaKnown RBP11.37□□□□□ -0.59
HERC1-212ENST00000561348 PBX2P40425 430 aa11.37□□□□□ -0.59
HERC1-212ENST00000561348 IKBKEQ14164 716 aa11.37□□□□□ -0.59
HERC1-212ENST00000561348 CTTNQ14247 550 aaKnown RBP11.37□□□□□ -0.59
HERC1-212ENST00000561348 FERMT3Q86UX7 667 aa11.37□□□□□ -0.59
HERC1-212ENST00000561348 LRRC71Q8N4P6 559 aa11.37□□□□□ -0.59
HERC1-212ENST00000561348 DEFB123Q8N688 67 aa11.37□□□□□ -0.59
HERC1-212ENST00000561348 IL27Q8NEV9 243 aa11.37□□□□□ -0.59
HERC1-212ENST00000561348 DBF4BQ8NFT6 615 aa11.37□□□□□ -0.59
HERC1-212ENST00000561348 HERVK_113Q902F9 699 aa11.37□□□□□ -0.59
HERC1-212ENST00000561348 HAS1Q92839 578 aa11.37□□□□□ -0.59
HERC1-212ENST00000561348 DYDC2Q96IM9 177 aa11.37□□□□□ -0.59
HERC1-212ENST00000561348 FAM167AQ96KS9 214 aa11.37□□□□□ -0.59
HERC1-212ENST00000561348 CCDC43Q96MW1 224 aaKnown RBP11.37□□□□□ -0.59
HERC1-212ENST00000561348 OSBPL7Q9BZF2 842 aa11.37□□□□□ -0.59
HERC1-212ENST00000561348 KCNMB3Q9NPA1 279 aa11.37□□□□□ -0.59
HERC1-212ENST00000561348 RGL1Q9NZL6 768 aa11.37□□□□□ -0.59
HERC1-212ENST00000561348 MSRAQ9UJ68 235 aa11.37□□□□□ -0.59
HERC1-212ENST00000561348 CEP131Q9UPN4 1083 aa11.37□□□□□ -0.59
HERC1-212ENST00000561348 AKT3Q9Y243 479 aa11.37□□□□□ -0.59
HERC1-212ENST00000561348 MAFBQ9Y5Q3 323 aaPredicted RBP11.37□□□□□ -0.59
HERC1-212ENST00000561348 RANBP2P49792 3224 aaKnown RBP11.37□□□□□ -0.59
HERC1-212ENST00000561348 A0A087WWV3 80 aa11.36□□□□□ -0.59
HERC1-212ENST00000561348 K7ELQ4 463 aaPredicted RBP11.36□□□□□ -0.59
HERC1-212ENST00000561348 TBX3O15119 743 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms