RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 THEGQ9P2T0 379 aa18.14■□□□□ 0.49
LMX1B-204ENST00000561065 MTUS1Q9ULD2 1270 aa18.14■□□□□ 0.49
LMX1B-204ENST00000561065 TTC3P53804 2025 aa18.13■□□□□ 0.49
LMX1B-204ENST00000561065 DTNBO60941 627 aa18.13■□□□□ 0.49
LMX1B-204ENST00000561065 ATP4AP20648 1035 aa18.13■□□□□ 0.49
LMX1B-204ENST00000561065 ERVK-21P61565 698 aa18.13■□□□□ 0.49
LMX1B-204ENST00000561065 MRPS6P82932 125 aaKnown RBP18.13■□□□□ 0.49
LMX1B-204ENST00000561065 SETQ01105 290 aaPredicted RBP18.13■□□□□ 0.49
LMX1B-204ENST00000561065 PRR16Q569H4 304 aa18.13■□□□□ 0.49
LMX1B-204ENST00000561065 LINC01599Q8WXQ3 324 aa18.13■□□□□ 0.49
LMX1B-204ENST00000561065 ZNF577Q9BSK1 485 aa18.13■□□□□ 0.49
LMX1B-204ENST00000561065 AGO3Q9H9G7 860 aaKnown RBP18.13■□□□□ 0.49
LMX1B-204ENST00000561065 BRWD1Q9NSI6 2320 aa18.12■□□□□ 0.49
LMX1B-204ENST00000561065 POTEB3A0JP26 581 aa18.12■□□□□ 0.49
LMX1B-204ENST00000561065 RRN3P2A6NIE6 340 aa18.12■□□□□ 0.49
LMX1B-204ENST00000561065 ZBTB42B2RXF5 422 aa18.12■□□□□ 0.49
LMX1B-204ENST00000561065 M0R2N6 131 aa18.12■□□□□ 0.49
LMX1B-204ENST00000561065 TMEM62Q0P6H9 643 aa18.12■□□□□ 0.49
LMX1B-204ENST00000561065 POTEBQ6S5H4 581 aa18.12■□□□□ 0.49
LMX1B-204ENST00000561065 BICD2Q8TD16 824 aa18.12■□□□□ 0.49
LMX1B-204ENST00000561065 APBB2Q92870 758 aa18.12■□□□□ 0.49
LMX1B-204ENST00000561065 TOP1MTQ969P6 601 aa18.12■□□□□ 0.49
LMX1B-204ENST00000561065 C17orf80Q9BSJ5 609 aa18.12■□□□□ 0.49
LMX1B-204ENST00000561065 SUGCTQ9HAC7 445 aa18.12■□□□□ 0.49
LMX1B-204ENST00000561065 SH3GLB2Q9NR46 395 aa18.12■□□□□ 0.49
LMX1B-204ENST00000561065 BACH1O14867 736 aa18.11■□□□□ 0.49
LMX1B-204ENST00000561065 CDKL5O76039 1030 aa18.11■□□□□ 0.49
LMX1B-204ENST00000561065 SSRP1Q08945 709 aaKnown RBP18.11■□□□□ 0.49
LMX1B-204ENST00000561065 SCRN1Q12765 414 aa18.11■□□□□ 0.49
LMX1B-204ENST00000561065 TJAP1Q5JTD0 557 aa18.11■□□□□ 0.49
LMX1B-204ENST00000561065 ATP8B4Q8TF62 1192 aa18.11■□□□□ 0.49
LMX1B-204ENST00000561065 TGS1Q96RS0 853 aaKnown RBP18.11■□□□□ 0.49
LMX1B-204ENST00000561065 INSL6Q9Y581 213 aa18.11■□□□□ 0.49
LMX1B-204ENST00000561065 PCDHA2Q9Y5H9 948 aa18.11■□□□□ 0.49
LMX1B-204ENST00000561065 IGSF9BQ9UPX0 1349 aa18.1■□□□□ 0.49
LMX1B-204ENST00000561065 TCF20Q9UGU0 1960 aaKnown RBP18.1■□□□□ 0.49
LMX1B-204ENST00000561065 GTPBP6O43824 516 aaPredicted RBP18.1■□□□□ 0.49
LMX1B-204ENST00000561065 UPP2O95045 317 aa18.1■□□□□ 0.49
LMX1B-204ENST00000561065 DEXIO95424 95 aa18.1■□□□□ 0.49
LMX1B-204ENST00000561065 SLC26A2P50443 739 aa18.1■□□□□ 0.49
LMX1B-204ENST00000561065 NLRP5P59047 1200 aa18.1■□□□□ 0.49
LMX1B-204ENST00000561065 ZNF746Q6NUN9 644 aaPredicted RBP18.1■□□□□ 0.49
LMX1B-204ENST00000561065 SWSAP1Q6NVH7 229 aa18.1■□□□□ 0.49
LMX1B-204ENST00000561065 MTHFD1LQ6UB35 978 aa18.1■□□□□ 0.49
LMX1B-204ENST00000561065 TSHZ1Q6ZSZ6 1077 aa18.1■□□□□ 0.49
LMX1B-204ENST00000561065 RSPH3Q86UC2 560 aa18.1■□□□□ 0.49
LMX1B-204ENST00000561065 GJA10Q969M2 543 aa18.1■□□□□ 0.49
LMX1B-204ENST00000561065 RC3H2Q9HBD1 1191 aaKnown RBP18.1■□□□□ 0.49
LMX1B-204ENST00000561065 ZNF302Q9NR11 478 aa18.1■□□□□ 0.49
LMX1B-204ENST00000561065 TPCN1Q9ULQ1 816 aa18.1■□□□□ 0.49
LMX1B-204ENST00000561065 PCDHA4Q9UN74 947 aa18.1■□□□□ 0.49
LMX1B-204ENST00000561065 TRPV2Q9Y5S1 764 aa18.1■□□□□ 0.49
LMX1B-204ENST00000561065 SMIM35A0A1B0GVV1 85 aa18.09■□□□□ 0.49
LMX1B-204ENST00000561065 MSH4O15457 936 aa18.09■□□□□ 0.49
LMX1B-204ENST00000561065 CD52P31358 61 aa18.09■□□□□ 0.49
LMX1B-204ENST00000561065 TFF2Q03403 129 aa18.09■□□□□ 0.49
LMX1B-204ENST00000561065 FAM160B1Q5W0V3 765 aa18.09■□□□□ 0.49
LMX1B-204ENST00000561065 MIS18BP1Q6P0N0 1132 aa18.09■□□□□ 0.49
LMX1B-204ENST00000561065 PDXDC2PQ6P474 469 aa18.09■□□□□ 0.49
LMX1B-204ENST00000561065 FAM177A1Q8N128 213 aaPredicted RBP18.09■□□□□ 0.49
LMX1B-204ENST00000561065 DAGLBQ8NCG7 672 aa18.09■□□□□ 0.49
LMX1B-204ENST00000561065 TBCKQ8TEA7 893 aa18.09■□□□□ 0.49
LMX1B-204ENST00000561065 ATXN2LQ8WWM7 1075 aaKnown RBP18.09■□□□□ 0.49
LMX1B-204ENST00000561065 YME1L1Q96TA2 773 aa18.09■□□□□ 0.49
LMX1B-204ENST00000561065 TBC1D22BQ9NU19 505 aa18.09■□□□□ 0.49
LMX1B-204ENST00000561065 MAFBQ9Y5Q3 323 aaPredicted RBP18.09■□□□□ 0.49
LMX1B-204ENST00000561065 COL1A2P08123 1366 aa18.09■□□□□ 0.49
LMX1B-204ENST00000561065 HBP1O60381 514 aa18.08■□□□□ 0.49
LMX1B-204ENST00000561065 TDP2O95551 362 aa18.08■□□□□ 0.49
LMX1B-204ENST00000561065 LINC00271P0C7V0 271 aa18.08■□□□□ 0.49
LMX1B-204ENST00000561065 KRT76Q01546 638 aa18.08■□□□□ 0.49
LMX1B-204ENST00000561065 IL17RAQ96F46 866 aa18.08■□□□□ 0.49
LMX1B-204ENST00000561065 ASB2Q96Q27 587 aa18.08■□□□□ 0.49
LMX1B-204ENST00000561065 UPF2Q9HAU5 1272 aaKnown RBP18.08■□□□□ 0.49
LMX1B-204ENST00000561065 GJB4Q9NTQ9 266 aa18.08■□□□□ 0.49
LMX1B-204ENST00000561065 KDM3AQ9Y4C1 1321 aa18.07■□□□□ 0.48
LMX1B-204ENST00000561065 ZNF862O60290 1169 aa18.07■□□□□ 0.48
LMX1B-204ENST00000561065 LARGE1O95461 756 aa18.07■□□□□ 0.48
LMX1B-204ENST00000561065 CTDNEP1O95476 244 aa18.07■□□□□ 0.48
LMX1B-204ENST00000561065 C22orf31O95567 290 aa18.07■□□□□ 0.48
LMX1B-204ENST00000561065 XBP1P17861 261 aa18.07■□□□□ 0.48
LMX1B-204ENST00000561065 KLRC1P26715 233 aa18.07■□□□□ 0.48
LMX1B-204ENST00000561065 AK2P54819 239 aa18.07■□□□□ 0.48
LMX1B-204ENST00000561065 UGCGQ16739 394 aa18.07■□□□□ 0.48
LMX1B-204ENST00000561065 RTN4RL1Q86UN2 441 aaPredicted RBP18.07■□□□□ 0.48
LMX1B-204ENST00000561065 SMAP1Q8IYB5 467 aaPredicted RBP18.07■□□□□ 0.48
LMX1B-204ENST00000561065 BLIDQ8IZY5 108 aa18.07■□□□□ 0.48
LMX1B-204ENST00000561065 IL27Q8NEV9 243 aa18.07■□□□□ 0.48
LMX1B-204ENST00000561065 SLC5A5Q92911 643 aa18.07■□□□□ 0.48
LMX1B-204ENST00000561065 SLKQ9H2G2 1235 aaPredicted RBP18.07■□□□□ 0.48
LMX1B-204ENST00000561065 KCNJ14Q9UNX9 436 aa18.07■□□□□ 0.48
LMX1B-204ENST00000561065 STK36Q9NRP7 1315 aa18.07■□□□□ 0.48
LMX1B-204ENST00000561065 ENPP3O14638 875 aa18.06■□□□□ 0.48
LMX1B-204ENST00000561065 PFKFB2O60825 505 aa18.06■□□□□ 0.48
LMX1B-204ENST00000561065 RPLP2P05387 115 aaKnown RBP18.06■□□□□ 0.48
LMX1B-204ENST00000561065 USP11P51784 963 aa18.06■□□□□ 0.48
LMX1B-204ENST00000561065 EPC2Q52LR7 807 aa18.06■□□□□ 0.48
LMX1B-204ENST00000561065 IER5Q5VY09 327 aa18.06■□□□□ 0.48
LMX1B-204ENST00000561065 KIAA0319LQ8IZA0 1049 aa18.06■□□□□ 0.48
LMX1B-204ENST00000561065 FBXO22Q8NEZ5 403 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms