RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 RARRES1P49788 294 aa14.28□□□□□ -0.12
SNX1-211ENST00000560829 ALDH5A1P51649 535 aaPredicted RBP14.28□□□□□ -0.12
SNX1-211ENST00000560829 MARSP56192 900 aaKnown RBP14.28□□□□□ -0.12
SNX1-211ENST00000560829 CNTN2Q02246 1040 aa14.28□□□□□ -0.12
SNX1-211ENST00000560829 RBL2Q08999 1139 aa14.28□□□□□ -0.12
SNX1-211ENST00000560829 FAM133AQ8N9E0 248 aa14.28□□□□□ -0.12
SNX1-211ENST00000560829 CCDC51Q96ER9 411 aa14.28□□□□□ -0.12
SNX1-211ENST00000560829 PCDHA10Q9Y5I2 948 aa14.28□□□□□ -0.12
SNX1-211ENST00000560829 POTEB2H3BUK9 544 aa14.27□□□□□ -0.12
SNX1-211ENST00000560829 TRAF5O00463 557 aa14.27□□□□□ -0.12
SNX1-211ENST00000560829 EIF3DO15371 548 aaKnown RBP eCLIP14.27□□□□□ -0.12
SNX1-211ENST00000560829 ARHGAP6O43182 974 aa14.27□□□□□ -0.12
SNX1-211ENST00000560829 MFAP3LO75121 409 aa14.27□□□□□ -0.12
SNX1-211ENST00000560829 FAM13AO94988 1023 aa14.27□□□□□ -0.12
SNX1-211ENST00000560829 GNA14O95837 355 aa14.27□□□□□ -0.12
SNX1-211ENST00000560829 PRKCSHP14314 528 aaPredicted RBP14.27□□□□□ -0.12
SNX1-211ENST00000560829 ERCC3P19447 782 aa14.27□□□□□ -0.12
SNX1-211ENST00000560829 FECHP22830 423 aa14.27□□□□□ -0.12
SNX1-211ENST00000560829 MTIF2P46199 727 aaKnown RBP14.27□□□□□ -0.12
SNX1-211ENST00000560829 ADKP55263 362 aaKnown RBP14.27□□□□□ -0.12
SNX1-211ENST00000560829 KNOP1Q1ED39 458 aaKnown RBP14.27□□□□□ -0.12
SNX1-211ENST00000560829 CEP135Q66GS9 1140 aa14.27□□□□□ -0.12
SNX1-211ENST00000560829 NCAPG2Q86XI2 1143 aa14.27□□□□□ -0.12
SNX1-211ENST00000560829 CREBRFQ8IUR6 639 aa14.27□□□□□ -0.12
SNX1-211ENST00000560829 CNGA4Q8IV77 575 aa14.27□□□□□ -0.12
SNX1-211ENST00000560829 GTF3C2Q8WUA4 911 aaPredicted RBP14.27□□□□□ -0.12
SNX1-211ENST00000560829 EEF2KMTQ96G04 330 aa14.27□□□□□ -0.12
SNX1-211ENST00000560829 FIZ1Q96SL8 496 aa14.27□□□□□ -0.12
SNX1-211ENST00000560829 BAG1Q99933 345 aaPredicted RBP14.27□□□□□ -0.12
SNX1-211ENST00000560829 PAGR1Q9BTK6 254 aa14.27□□□□□ -0.12
SNX1-211ENST00000560829 NOC4LQ9BVI4 516 aaKnown RBP14.27□□□□□ -0.12
SNX1-211ENST00000560829 TIPINQ9BVW5 301 aa14.27□□□□□ -0.12
SNX1-211ENST00000560829 TXNRD2Q9NNW7 524 aa14.27□□□□□ -0.12
SNX1-211ENST00000560829 ANKEF1Q9NU02 776 aa14.27□□□□□ -0.12
SNX1-211ENST00000560829 SLC45A1Q9Y2W3 748 aa14.27□□□□□ -0.12
SNX1-211ENST00000560829 PDXKO00764 312 aa14.27□□□□□ -0.13
SNX1-211ENST00000560829 MYBP10242 640 aa14.27□□□□□ -0.13
SNX1-211ENST00000560829 YWHABP31946 246 aaKnown RBP14.27□□□□□ -0.13
SNX1-211ENST00000560829 HOXD13P35453 343 aa14.27□□□□□ -0.13
SNX1-211ENST00000560829 GOLGA8FQ08AF8 430 aa14.27□□□□□ -0.13
SNX1-211ENST00000560829 GOLGA8DPQ0D2H9 430 aa14.27□□□□□ -0.13
SNX1-211ENST00000560829 MAPK7Q13164 816 aa14.27□□□□□ -0.13
SNX1-211ENST00000560829 MAN2A1Q16706 1144 aa14.27□□□□□ -0.13
SNX1-211ENST00000560829 UGCGQ16739 394 aa14.27□□□□□ -0.13
SNX1-211ENST00000560829 E4F1Q66K89 784 aaPredicted RBP14.27□□□□□ -0.13
SNX1-211ENST00000560829 PADI6Q6TGC4 694 aa14.27□□□□□ -0.13
SNX1-211ENST00000560829 NELFCDQ8IXH7 590 aa14.27□□□□□ -0.13
SNX1-211ENST00000560829 CCAR2Q8N163 923 aaKnown RBP14.27□□□□□ -0.13
SNX1-211ENST00000560829 ERGIC2Q96RQ1 377 aa14.27□□□□□ -0.13
SNX1-211ENST00000560829 MRPL44Q9H9J2 332 aaKnown RBP14.27□□□□□ -0.13
SNX1-211ENST00000560829 UBE4BO95155 1302 aa14.26□□□□□ -0.13
SNX1-211ENST00000560829 SOWAHBA6NEL2 793 aa14.26□□□□□ -0.13
SNX1-211ENST00000560829 B4DLN1 442 aa14.26□□□□□ -0.13
SNX1-211ENST00000560829 DKC1O60832 514 aaKnown RBP eCLIP14.26□□□□□ -0.13
SNX1-211ENST00000560829 TPM1P09493 284 aa14.26□□□□□ -0.13
SNX1-211ENST00000560829 CASP14P31944 242 aa14.26□□□□□ -0.13
SNX1-211ENST00000560829 FXR1P51114 621 aaKnown RBP eCLIP14.26□□□□□ -0.13
SNX1-211ENST00000560829 VWA3BQ502W6 1294 aa14.26□□□□□ -0.13
SNX1-211ENST00000560829 DAW1Q8N136 415 aa14.26□□□□□ -0.13
SNX1-211ENST00000560829 MYCT1Q8N699 235 aa14.26□□□□□ -0.13
SNX1-211ENST00000560829 SHCBP1Q8NEM2 672 aa14.26□□□□□ -0.13
SNX1-211ENST00000560829 NAA15Q9BXJ9 866 aaKnown RBP14.26□□□□□ -0.13
SNX1-211ENST00000560829 BCAS3Q9H6U6 928 aa14.26□□□□□ -0.13
SNX1-211ENST00000560829 JPH1Q9HDC5 661 aaPredicted RBP14.26□□□□□ -0.13
SNX1-211ENST00000560829 SLC9A2Q9UBY0 812 aa14.26□□□□□ -0.13
SNX1-211ENST00000560829 PNMA3Q9UL41 463 aa14.26□□□□□ -0.13
SNX1-211ENST00000560829 NKRFO15226 690 aaKnown RBP eCLIP14.25□□□□□ -0.13
SNX1-211ENST00000560829 MAPTP10636 758 aaKnown RBP14.25□□□□□ -0.13
SNX1-211ENST00000560829 TBC1D8BQ0IIM8 1120 aa14.25□□□□□ -0.13
SNX1-211ENST00000560829 NFIL3Q16649 462 aa14.25□□□□□ -0.13
SNX1-211ENST00000560829 ZNF720Q7Z2F6 126 aa14.25□□□□□ -0.13
SNX1-211ENST00000560829 RETREG2Q8NC44 543 aa14.25□□□□□ -0.13
SNX1-211ENST00000560829 IQCDQ96DY2 449 aa14.25□□□□□ -0.13
SNX1-211ENST00000560829 MS4A4AQ96JQ5 239 aa14.25□□□□□ -0.13
SNX1-211ENST00000560829 STRA6Q9BX79 667 aa14.25□□□□□ -0.13
SNX1-211ENST00000560829 NDST4Q9H3R1 872 aa14.25□□□□□ -0.13
SNX1-211ENST00000560829 MROH8Q9H579 483 aa14.25□□□□□ -0.13
SNX1-211ENST00000560829 TYW1Q9NV66 732 aaKnown RBP14.25□□□□□ -0.13
SNX1-211ENST00000560829 DNAJC25-GNG10A0A024R161 153 aa14.25□□□□□ -0.13
SNX1-211ENST00000560829 SFI1A8K8P3 1242 aa14.25□□□□□ -0.13
SNX1-211ENST00000560829 CALUO43852 315 aaPredicted RBP14.25□□□□□ -0.13
SNX1-211ENST00000560829 HIP1RO75146 1068 aa14.25□□□□□ -0.13
SNX1-211ENST00000560829 PRPF6O94906 941 aaKnown RBP14.25□□□□□ -0.13
SNX1-211ENST00000560829 GCNT3O95395 438 aa14.25□□□□□ -0.13
SNX1-211ENST00000560829 PSAPP07602 524 aa14.25□□□□□ -0.13
SNX1-211ENST00000560829 CETPP11597 493 aa14.25□□□□□ -0.13
SNX1-211ENST00000560829 Q3C1V9 767 aa14.25□□□□□ -0.13
SNX1-211ENST00000560829 FIGNQ5HY92 759 aa14.25□□□□□ -0.13
SNX1-211ENST00000560829 FKBP15Q5T1M5 1219 aa14.25□□□□□ -0.13
SNX1-211ENST00000560829 ABHD15Q6UXT9 468 aa14.25□□□□□ -0.13
SNX1-211ENST00000560829 STXBP4Q6ZWJ1 553 aa14.25□□□□□ -0.13
SNX1-211ENST00000560829 ATP6V0A1Q93050 837 aa14.25□□□□□ -0.13
SNX1-211ENST00000560829 NUP58Q9BVL2 599 aa14.25□□□□□ -0.13
SNX1-211ENST00000560829 TTYH3Q9C0H2 523 aa14.25□□□□□ -0.13
SNX1-211ENST00000560829 ZNF408Q9H9D4 720 aa14.25□□□□□ -0.13
SNX1-211ENST00000560829 GBA2Q9HCG7 927 aaPredicted RBP14.25□□□□□ -0.13
SNX1-211ENST00000560829 LOC102724159A0A0B4J2E5 919 aa14.24□□□□□ -0.13
SNX1-211ENST00000560829 CETN3O15182 167 aa14.24□□□□□ -0.13
SNX1-211ENST00000560829 PPP1R37O75864 691 aa14.24□□□□□ -0.13
SNX1-211ENST00000560829 STBD1O95210 358 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms