RNA–Protein interactions for RNA: ENST00000560673.1

KNSTRN-211, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 2

Gene KNSTRN, Length 623 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-211ENST00000560673 MAML2Q8IZL2 1156 aaPredicted RBP13.28□□□□□ -0.28
KNSTRN-211ENST00000560673 C12orf76Q8N812 135 aaPredicted RBP13.28□□□□□ -0.28
KNSTRN-211ENST00000560673 COLGALT1Q8NBJ5 622 aa13.28□□□□□ -0.28
KNSTRN-211ENST00000560673 DDX1Q92499 740 aaKnown RBP13.28□□□□□ -0.28
KNSTRN-211ENST00000560673 USP26Q9BXU7 913 aa13.28□□□□□ -0.28
KNSTRN-211ENST00000560673 EPC1Q9H2F5 836 aa13.28□□□□□ -0.28
KNSTRN-211ENST00000560673 C1orf115Q9H7X2 142 aa13.28□□□□□ -0.28
KNSTRN-211ENST00000560673 MLXIPQ9HAP2 919 aa13.28□□□□□ -0.28
KNSTRN-211ENST00000560673 PARD6AQ9NPB6 346 aa13.28□□□□□ -0.28
KNSTRN-211ENST00000560673 GPCPD1Q9NPB8 672 aa13.28□□□□□ -0.28
KNSTRN-211ENST00000560673 GMEB2Q9UKD1 530 aa13.28□□□□□ -0.28
KNSTRN-211ENST00000560673 EXOC6BQ9Y2D4 811 aa13.28□□□□□ -0.28
KNSTRN-211ENST00000560673 HELZ2Q9BYK8 2649 aaKnown RBP13.27□□□□□ -0.28
KNSTRN-211ENST00000560673 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.27□□□□□ -0.29
KNSTRN-211ENST00000560673 IPO8O15397 1037 aaKnown RBP13.27□□□□□ -0.29
KNSTRN-211ENST00000560673 APPP05067 770 aa13.27□□□□□ -0.29
KNSTRN-211ENST00000560673 NR3C2P08235 984 aa13.27□□□□□ -0.29
KNSTRN-211ENST00000560673 IFIT2P09913 472 aaKnown RBP13.27□□□□□ -0.29
KNSTRN-211ENST00000560673 TRIM27P14373 513 aa13.27□□□□□ -0.29
KNSTRN-211ENST00000560673 ADAM17P78536 824 aa13.27□□□□□ -0.29
KNSTRN-211ENST00000560673 PLCB3Q01970 1234 aa13.27□□□□□ -0.29
KNSTRN-211ENST00000560673 NONOQ15233 471 aaKnown RBP eCLIP13.27□□□□□ -0.29
KNSTRN-211ENST00000560673 CCDC149Q6ZUS6 474 aa13.27□□□□□ -0.29
KNSTRN-211ENST00000560673 CLASRPQ8N2M8 674 aaKnown RBP13.27□□□□□ -0.29
KNSTRN-211ENST00000560673 LMBR1Q8WVP7 490 aa13.27□□□□□ -0.29
KNSTRN-211ENST00000560673 AGO3Q9H9G7 860 aaKnown RBP13.27□□□□□ -0.29
KNSTRN-211ENST00000560673 EPB41L4AQ9HCS5 686 aaPredicted RBP13.27□□□□□ -0.29
KNSTRN-211ENST00000560673 DZANK1Q9NVP4 752 aa13.27□□□□□ -0.29
KNSTRN-211ENST00000560673 COL20A1Q9P218 1284 aa13.27□□□□□ -0.29
KNSTRN-211ENST00000560673 FBXO4Q9UKT5 387 aa13.27□□□□□ -0.29
KNSTRN-211ENST00000560673 UNC79Q9P2D8 2635 aa13.27□□□□□ -0.29
KNSTRN-211ENST00000560673 FRMPD2Q68DX3 1309 aaPredicted RBP13.27□□□□□ -0.29
KNSTRN-211ENST00000560673 CCDC171Q6TFL3 1326 aa13.27□□□□□ -0.29
KNSTRN-211ENST00000560673 SMG1Q96Q15 3661 aaKnown RBP13.27□□□□□ -0.29
KNSTRN-211ENST00000560673 NAV2Q8IVL1 2488 aa13.27□□□□□ -0.29
KNSTRN-211ENST00000560673 TSPY2A6NKD2 308 aa13.26□□□□□ -0.29
KNSTRN-211ENST00000560673 TBKBP1A7MCY6 615 aa13.26□□□□□ -0.29
KNSTRN-211ENST00000560673 NOP56O00567 594 aaKnown RBP13.26□□□□□ -0.29
KNSTRN-211ENST00000560673 LAMTOR5O43504 91 aa13.26□□□□□ -0.29
KNSTRN-211ENST00000560673 TBC1D4O60343 1298 aa13.26□□□□□ -0.29
KNSTRN-211ENST00000560673 NMT2O60551 498 aa13.26□□□□□ -0.29
KNSTRN-211ENST00000560673 IBSPP21815 317 aaPredicted RBP13.26□□□□□ -0.29
KNSTRN-211ENST00000560673 LRSAM1Q6UWE0 723 aa13.26□□□□□ -0.29
KNSTRN-211ENST00000560673 WDFY3Q8IZQ1 3526 aa13.26□□□□□ -0.29
KNSTRN-211ENST00000560673 TBC1D5Q92609 795 aa13.26□□□□□ -0.29
KNSTRN-211ENST00000560673 IL17RBQ9NRM6 502 aa13.26□□□□□ -0.29
KNSTRN-211ENST00000560673 TYW1Q9NV66 732 aaKnown RBP13.26□□□□□ -0.29
KNSTRN-211ENST00000560673 ZNF215Q9UL58 517 aaPredicted RBP13.26□□□□□ -0.29
KNSTRN-211ENST00000560673 PCDHB7Q9Y5E2 793 aa13.26□□□□□ -0.29
KNSTRN-211ENST00000560673 NRCAMQ92823 1304 aa13.25□□□□□ -0.29
KNSTRN-211ENST00000560673 CLASP2O75122 1294 aaKnown RBP13.25□□□□□ -0.29
KNSTRN-211ENST00000560673 LAG3P18627 525 aa13.25□□□□□ -0.29
KNSTRN-211ENST00000560673 GNAT2P19087 354 aa13.25□□□□□ -0.29
KNSTRN-211ENST00000560673 UBA1P22314 1058 aaKnown RBP13.25□□□□□ -0.29
KNSTRN-211ENST00000560673 SP2Q02086 613 aa13.25□□□□□ -0.29
KNSTRN-211ENST00000560673 KRT17Q04695 432 aa13.25□□□□□ -0.29
KNSTRN-211ENST00000560673 SMC1AQ14683 1233 aaKnown RBP13.25□□□□□ -0.29
KNSTRN-211ENST00000560673 N4BP2L1Q5TBK1 243 aaPredicted RBP13.25□□□□□ -0.29
KNSTRN-211ENST00000560673 KANK3Q6NY19 840 aa13.25□□□□□ -0.29
KNSTRN-211ENST00000560673 MCF2L2Q86YR7 1114 aa13.25□□□□□ -0.29
KNSTRN-211ENST00000560673 MRPL43Q8N983 215 aaKnown RBP13.25□□□□□ -0.29
KNSTRN-211ENST00000560673 RHPN1Q8TCX5 695 aa13.25□□□□□ -0.29
KNSTRN-211ENST00000560673 CLUAP1Q96AJ1 413 aa13.25□□□□□ -0.29
KNSTRN-211ENST00000560673 SPATA6Q9NWH7 488 aaPredicted RBP13.25□□□□□ -0.29
KNSTRN-211ENST00000560673 CDY2AQ9Y6F7 541 aa13.25□□□□□ -0.29
KNSTRN-211ENST00000560673 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.25□□□□□ -0.29
KNSTRN-211ENST00000560673 ITPR1Q14643 2758 aa13.25□□□□□ -0.29
KNSTRN-211ENST00000560673 LOC400499M0QZD8 3231 aa13.24□□□□□ -0.29
KNSTRN-211ENST00000560673 C2orf71A6NGG8 1288 aa13.24□□□□□ -0.29
KNSTRN-211ENST00000560673 TGFB3P10600 412 aa13.24□□□□□ -0.29
KNSTRN-211ENST00000560673 SRFP11831 508 aa13.24□□□□□ -0.29
KNSTRN-211ENST00000560673 GLULP15104 373 aa13.24□□□□□ -0.29
KNSTRN-211ENST00000560673 SARSP49591 514 aaKnown RBP13.24□□□□□ -0.29
KNSTRN-211ENST00000560673 CSTF1Q05048 431 aaKnown RBP13.24□□□□□ -0.29
KNSTRN-211ENST00000560673 SPEM2Q0P670 501 aa13.24□□□□□ -0.29
KNSTRN-211ENST00000560673 HSP90AB4PQ58FF6 505 aa13.24□□□□□ -0.29
KNSTRN-211ENST00000560673 ZBTB44Q8NCP5 570 aa13.24□□□□□ -0.29
KNSTRN-211ENST00000560673 PJA1Q8NG27 643 aa13.24□□□□□ -0.29
KNSTRN-211ENST00000560673 BCL11AQ9H165 835 aa13.24□□□□□ -0.29
KNSTRN-211ENST00000560673 PXMP2Q9NR77 195 aa13.24□□□□□ -0.29
KNSTRN-211ENST00000560673 ARHGEF3Q9NR81 526 aa13.24□□□□□ -0.29
KNSTRN-211ENST00000560673 ZSCAN32Q9NX65 697 aa13.24□□□□□ -0.29
KNSTRN-211ENST00000560673 HCSTQ9UBK5 93 aa13.24□□□□□ -0.29
KNSTRN-211ENST00000560673 TNNQ9UQP3 1299 aa13.24□□□□□ -0.29
KNSTRN-211ENST00000560673 SQORQ9Y6N5 450 aa13.24□□□□□ -0.29
KNSTRN-211ENST00000560673 DMXL2Q8TDJ6 3036 aa13.24□□□□□ -0.29
KNSTRN-211ENST00000560673 MYH7P12883 1935 aa13.23□□□□□ -0.29
KNSTRN-211ENST00000560673 HSPD1P10809 573 aaKnown RBP13.23□□□□□ -0.29
KNSTRN-211ENST00000560673 MYCLP12524 364 aaPredicted RBP13.23□□□□□ -0.29
KNSTRN-211ENST00000560673 ATP5JP18859 108 aa13.23□□□□□ -0.29
KNSTRN-211ENST00000560673 CA8P35219 290 aa13.23□□□□□ -0.29
KNSTRN-211ENST00000560673 PPM1AP35813 382 aa13.23□□□□□ -0.29
KNSTRN-211ENST00000560673 UNQ6494/PRO21346Q6UXR6 183 aa13.23□□□□□ -0.29
KNSTRN-211ENST00000560673 TMC5Q6UXY8 1006 aa13.23□□□□□ -0.29
KNSTRN-211ENST00000560673 KDF1Q8NAX2 398 aaPredicted RBP13.23□□□□□ -0.29
KNSTRN-211ENST00000560673 TMEM87AQ8NBN3 555 aa13.23□□□□□ -0.29
KNSTRN-211ENST00000560673 GPR152Q8TDT2 470 aa13.23□□□□□ -0.29
KNSTRN-211ENST00000560673 DNAJB3Q8WWF6 145 aa13.23□□□□□ -0.29
KNSTRN-211ENST00000560673 PADI3Q9ULW8 664 aa13.23□□□□□ -0.29
KNSTRN-211ENST00000560673 ABCB11O95342 1321 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms