RNA–Protein interactions for RNA: ENST00000560491.2

LYSMD2-204, Transcript of LysM domain containing 2, humanhuman

TSL 3 BASIC

Gene LYSMD2, Length 1,026 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-204ENST00000560491 CLIC4Q9Y696 253 aa17.43■□□□□ 0.38
LYSMD2-204ENST00000560491 NRCAMQ92823 1304 aa17.43■□□□□ 0.38
LYSMD2-204ENST00000560491 TMEM150BA6NC51 233 aa17.42■□□□□ 0.38
LYSMD2-204ENST00000560491 F13A1P00488 732 aa17.42■□□□□ 0.38
LYSMD2-204ENST00000560491 OATP04181 439 aa17.42■□□□□ 0.38
LYSMD2-204ENST00000560491 RAG1P15918 1043 aa17.42■□□□□ 0.38
LYSMD2-204ENST00000560491 ADAM17P78536 824 aa17.42■□□□□ 0.38
LYSMD2-204ENST00000560491 MDM2Q00987 491 aaPredicted RBP17.42■□□□□ 0.38
LYSMD2-204ENST00000560491 SF3A1Q15459 793 aaKnown RBP17.42■□□□□ 0.38
LYSMD2-204ENST00000560491 MARCH8Q5T0T0 291 aa17.42■□□□□ 0.38
LYSMD2-204ENST00000560491 EIF2AK1Q9BQI3 630 aaKnown RBP17.42■□□□□ 0.38
LYSMD2-204ENST00000560491 LXNQ9BS40 222 aa17.42■□□□□ 0.38
LYSMD2-204ENST00000560491 NOC4LQ9BVI4 516 aaKnown RBP17.42■□□□□ 0.38
LYSMD2-204ENST00000560491 SCN5AQ14524 2016 aa17.42■□□□□ 0.38
LYSMD2-204ENST00000560491 ZBTB42B2RXF5 422 aa17.41■□□□□ 0.38
LYSMD2-204ENST00000560491 RBAK-RBAKDNI3L0D1 243 aa17.41■□□□□ 0.38
LYSMD2-204ENST00000560491 LAD1O00515 517 aa17.41■□□□□ 0.38
LYSMD2-204ENST00000560491 HBP1O60381 514 aa17.41■□□□□ 0.38
LYSMD2-204ENST00000560491 STBD1O95210 358 aa17.41■□□□□ 0.38
LYSMD2-204ENST00000560491 TIMP1P01033 207 aa17.41■□□□□ 0.38
LYSMD2-204ENST00000560491 P4HBP07237 508 aaKnown RBP17.41■□□□□ 0.38
LYSMD2-204ENST00000560491 GNAT1P11488 350 aa17.41■□□□□ 0.38
LYSMD2-204ENST00000560491 CYP2C18P33260 490 aa17.41■□□□□ 0.38
LYSMD2-204ENST00000560491 QARSP47897 775 aaKnown RBP17.41■□□□□ 0.38
LYSMD2-204ENST00000560491 FXR2P51116 673 aaKnown RBP eCLIP17.41■□□□□ 0.38
LYSMD2-204ENST00000560491 PSMC5P62195 406 aa17.41■□□□□ 0.38
LYSMD2-204ENST00000560491 CEBPZQ03701 1054 aaKnown RBP17.41■□□□□ 0.38
LYSMD2-204ENST00000560491 PTK7Q13308 1070 aa17.41■□□□□ 0.38
LYSMD2-204ENST00000560491 CTTNQ14247 550 aaKnown RBP17.41■□□□□ 0.38
LYSMD2-204ENST00000560491 TMEM266Q2M3C6 531 aa17.41■□□□□ 0.38
LYSMD2-204ENST00000560491 FOXD4L6Q3SYB3 417 aaPredicted RBP17.41■□□□□ 0.38
LYSMD2-204ENST00000560491 FOXD4L3Q6VB84 417 aaPredicted RBP17.41■□□□□ 0.38
LYSMD2-204ENST00000560491 RUFY4Q6ZNE9 571 aa17.41■□□□□ 0.38
LYSMD2-204ENST00000560491 SERINC5Q86VE9 423 aa17.41■□□□□ 0.38
LYSMD2-204ENST00000560491 BBXQ8WY36 941 aaPredicted RBP17.41■□□□□ 0.38
LYSMD2-204ENST00000560491 BADQ92934 168 aa17.41■□□□□ 0.38
LYSMD2-204ENST00000560491 FAM167AQ96KS9 214 aa17.41■□□□□ 0.38
LYSMD2-204ENST00000560491 SEPT9Q9UHD8 586 aaPredicted RBP17.41■□□□□ 0.38
LYSMD2-204ENST00000560491 TUBE1Q9UJT0 475 aa17.41■□□□□ 0.38
LYSMD2-204ENST00000560491 PRPHP41219 470 aa17.4■□□□□ 0.38
LYSMD2-204ENST00000560491 MAGEA10P43363 369 aaPredicted RBP17.4■□□□□ 0.38
LYSMD2-204ENST00000560491 PLA2G4FQ68DD2 849 aa17.4■□□□□ 0.38
LYSMD2-204ENST00000560491 DTHD1Q6ZMT9 781 aa17.4■□□□□ 0.38
LYSMD2-204ENST00000560491 TNPO1Q92973 898 aaKnown RBP17.4■□□□□ 0.38
LYSMD2-204ENST00000560491 USP28Q96RU2 1077 aa17.4■□□□□ 0.38
LYSMD2-204ENST00000560491 SH2D3AQ9BRG2 576 aa17.4■□□□□ 0.38
LYSMD2-204ENST00000560491 WNT8AQ9H1J5 351 aa17.4■□□□□ 0.38
LYSMD2-204ENST00000560491 CEP290O15078 2479 aa17.4■□□□□ 0.38
LYSMD2-204ENST00000560491 EVPLQ92817 2033 aa17.4■□□□□ 0.38
LYSMD2-204ENST00000560491 SIP14410 1827 aa17.4■□□□□ 0.38
LYSMD2-204ENST00000560491 COL1A2P08123 1366 aa17.4■□□□□ 0.38
LYSMD2-204ENST00000560491 MBLAC1A4D2B0 266 aaPredicted RBP17.39■□□□□ 0.37
LYSMD2-204ENST00000560491 VWA3AA6NCI4 1184 aa17.39■□□□□ 0.37
LYSMD2-204ENST00000560491 RRN3P2A6NIE6 340 aa17.39■□□□□ 0.37
LYSMD2-204ENST00000560491 PP2D1A8MPX8 630 aa17.39■□□□□ 0.37
LYSMD2-204ENST00000560491 SLITRK3O94933 977 aa17.39■□□□□ 0.37
LYSMD2-204ENST00000560491 BRD1O95696 1058 aa17.39■□□□□ 0.37
LYSMD2-204ENST00000560491 PDIA4P13667 645 aaKnown RBP17.39■□□□□ 0.37
LYSMD2-204ENST00000560491 ANP32AP39687 249 aaKnown RBP17.39■□□□□ 0.37
LYSMD2-204ENST00000560491 CCL23P55773 120 aa17.39■□□□□ 0.37
LYSMD2-204ENST00000560491 TRIM71Q2Q1W2 868 aaKnown RBP17.39■□□□□ 0.37
LYSMD2-204ENST00000560491 XKR3Q5GH77 459 aa17.39■□□□□ 0.37
LYSMD2-204ENST00000560491 ZNF484Q5JVG2 852 aa17.39■□□□□ 0.37
LYSMD2-204ENST00000560491 TPH2Q8IWU9 490 aa17.39■□□□□ 0.37
LYSMD2-204ENST00000560491 IGSF22Q8N9C0 903 aa17.39■□□□□ 0.37
LYSMD2-204ENST00000560491 SCLYQ96I15 445 aa17.39■□□□□ 0.37
LYSMD2-204ENST00000560491 HSD17B14Q9BPX1 270 aa17.39■□□□□ 0.37
LYSMD2-204ENST00000560491 NRBP2Q9NSY0 501 aa17.39■□□□□ 0.37
LYSMD2-204ENST00000560491 LRWD1Q9UFC0 647 aa17.39■□□□□ 0.37
LYSMD2-204ENST00000560491 ZDHHC9Q9Y397 364 aa17.39■□□□□ 0.37
LYSMD2-204ENST00000560491 DDX11L8A8MPP1 907 aa17.38■□□□□ 0.37
LYSMD2-204ENST00000560491 ZBTB39O15060 712 aa17.38■□□□□ 0.37
LYSMD2-204ENST00000560491 MED24O75448 989 aa17.38■□□□□ 0.37
LYSMD2-204ENST00000560491 BMP15O95972 392 aa17.38■□□□□ 0.37
LYSMD2-204ENST00000560491 CKBP12277 381 aa17.38■□□□□ 0.37
LYSMD2-204ENST00000560491 BFSP2Q13515 415 aa17.38■□□□□ 0.37
LYSMD2-204ENST00000560491 PTPAQ15257 358 aa17.38■□□□□ 0.37
LYSMD2-204ENST00000560491 MTERF2Q49AM1 385 aa17.38■□□□□ 0.37
LYSMD2-204ENST00000560491 MFSD5Q6N075 450 aa17.38■□□□□ 0.37
LYSMD2-204ENST00000560491 MTHFD1LQ6UB35 978 aa17.38■□□□□ 0.37
LYSMD2-204ENST00000560491 ANO5Q75V66 913 aa17.38■□□□□ 0.37
LYSMD2-204ENST00000560491 C4orf19Q8IY42 314 aa17.38■□□□□ 0.37
LYSMD2-204ENST00000560491 CAGE1Q8TC20 777 aa17.38■□□□□ 0.37
LYSMD2-204ENST00000560491 NEK9Q8TD19 979 aa17.38■□□□□ 0.37
LYSMD2-204ENST00000560491 LBHD1Q9BQE6 289 aaPredicted RBP17.38■□□□□ 0.37
LYSMD2-204ENST00000560491 FAM49AQ9H0Q0 323 aaPredicted RBP17.38■□□□□ 0.37
LYSMD2-204ENST00000560491 ZSWIM4Q9H7M6 989 aa17.38■□□□□ 0.37
LYSMD2-204ENST00000560491 DAXXQ9UER7 740 aaPredicted RBP17.38■□□□□ 0.37
LYSMD2-204ENST00000560491 CEP131Q9UPN4 1083 aa17.38■□□□□ 0.37
LYSMD2-204ENST00000560491 A0A087WWV3 80 aa17.37■□□□□ 0.37
LYSMD2-204ENST00000560491 PITPNM1O00562 1244 aa17.37■□□□□ 0.37
LYSMD2-204ENST00000560491 DKC1O60832 514 aaKnown RBP eCLIP17.37■□□□□ 0.37
LYSMD2-204ENST00000560491 C22orf31O95567 290 aa17.37■□□□□ 0.37
LYSMD2-204ENST00000560491 CTSHP09668 335 aa17.37■□□□□ 0.37
LYSMD2-204ENST00000560491 SPATA31C1P0DKV0 1188 aa17.37■□□□□ 0.37
LYSMD2-204ENST00000560491 KLRC1P26715 233 aa17.37■□□□□ 0.37
LYSMD2-204ENST00000560491 CDC25AP30304 524 aa17.37■□□□□ 0.37
LYSMD2-204ENST00000560491 YWHABP31946 246 aaKnown RBP17.37■□□□□ 0.37
LYSMD2-204ENST00000560491 THPOP40225 353 aa17.37■□□□□ 0.37
LYSMD2-204ENST00000560491 GRIN1Q05586 938 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms