RNA–Protein interactions for RNA: ENST00000560336.6

LINC00520-206, long intergenic non-protein coding RNA 520, humanhuman

TSL 3 BASIC

Gene LINC00520, Length 883 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00520-206ENST00000560336 METAP2P50579 478 aaKnown RBP eCLIP9.08□□□□□ -0.96
LINC00520-206ENST00000560336 EVCP57679 992 aa9.08□□□□□ -0.96
LINC00520-206ENST00000560336 HMGN5P82970 282 aaKnown RBP9.08□□□□□ -0.96
LINC00520-206ENST00000560336 PICALMQ13492 652 aa9.08□□□□□ -0.96
LINC00520-206ENST00000560336 LRRC14Q15048 493 aa9.08□□□□□ -0.96
LINC00520-206ENST00000560336 ZC3H12AQ5D1E8 599 aaKnown RBP9.08□□□□□ -0.96
LINC00520-206ENST00000560336 C12orf60Q5U649 245 aa9.08□□□□□ -0.96
LINC00520-206ENST00000560336 PCNX4Q63HM2 1172 aa9.08□□□□□ -0.96
LINC00520-206ENST00000560336 LLGL2Q6P1M3 1020 aa9.08□□□□□ -0.96
LINC00520-206ENST00000560336 IQCA1Q86XH1 822 aa9.08□□□□□ -0.96
LINC00520-206ENST00000560336 RAB11FIP4Q86YS3 637 aa9.08□□□□□ -0.96
LINC00520-206ENST00000560336 NIM1KQ8IY84 436 aa9.08□□□□□ -0.96
LINC00520-206ENST00000560336 TMTC2Q8N394 836 aa9.08□□□□□ -0.96
LINC00520-206ENST00000560336 IGDCC4Q8TDY8 1250 aa9.08□□□□□ -0.96
LINC00520-206ENST00000560336 DDX11Q96FC9 970 aa9.08□□□□□ -0.96
LINC00520-206ENST00000560336 MTA3Q9BTC8 594 aa9.08□□□□□ -0.96
LINC00520-206ENST00000560336 VPS33BQ9H267 617 aa9.08□□□□□ -0.96
LINC00520-206ENST00000560336 LY9Q9HBG7 655 aa9.08□□□□□ -0.96
LINC00520-206ENST00000560336 MKNK2Q9HBH9 465 aa9.08□□□□□ -0.96
LINC00520-206ENST00000560336 C1GALT1Q9NS00 363 aa9.08□□□□□ -0.96
LINC00520-206ENST00000560336 USP40Q9NVE5 1235 aa9.08□□□□□ -0.96
LINC00520-206ENST00000560336 ZDHHC9Q9Y397 364 aa9.08□□□□□ -0.96
LINC00520-206ENST00000560336 SLC12A7Q9Y666 1083 aa9.08□□□□□ -0.96
LINC00520-206ENST00000560336 ROBO3Q96MS0 1386 aa9.08□□□□□ -0.96
LINC00520-206ENST00000560336 TNKSO95271 1327 aa9.07□□□□□ -0.96
LINC00520-206ENST00000560336 FLT1P17948 1338 aa9.07□□□□□ -0.96
LINC00520-206ENST00000560336 MYO3BQ8WXR4 1341 aa9.07□□□□□ -0.96
LINC00520-206ENST00000560336 PTPDC1A2A3K4 754 aa9.07□□□□□ -0.96
LINC00520-206ENST00000560336 YDJCA8MPS7 323 aa9.07□□□□□ -0.96
LINC00520-206ENST00000560336 H3BQV1 296 aa9.07□□□□□ -0.96
LINC00520-206ENST00000560336 JAK2O60674 1132 aa9.07□□□□□ -0.96
LINC00520-206ENST00000560336 RNGTTO60942 597 aaKnown RBP9.07□□□□□ -0.96
LINC00520-206ENST00000560336 ZSCAN22P10073 491 aaPredicted RBP9.07□□□□□ -0.96
LINC00520-206ENST00000560336 IARSP41252 1262 aaKnown RBP9.07□□□□□ -0.96
LINC00520-206ENST00000560336 RHBDL3P58872 404 aa9.07□□□□□ -0.96
LINC00520-206ENST00000560336 HDLBPQ00341 1268 aaKnown RBP9.07□□□□□ -0.96
LINC00520-206ENST00000560336 TAGLNQ01995 201 aaKnown RBP9.07□□□□□ -0.96
LINC00520-206ENST00000560336 PSMD2Q13200 908 aa9.07□□□□□ -0.96
LINC00520-206ENST00000560336 MCTP1Q6DN14 999 aa9.07□□□□□ -0.96
LINC00520-206ENST00000560336 CPLX2Q6PUV4 134 aaKnown RBP9.07□□□□□ -0.96
LINC00520-206ENST00000560336 APOA5Q6Q788 366 aa9.07□□□□□ -0.96
LINC00520-206ENST00000560336 SV2BQ7L1I2 683 aa9.07□□□□□ -0.96
LINC00520-206ENST00000560336 MICU3Q86XE3 530 aa9.07□□□□□ -0.96
LINC00520-206ENST00000560336 SMYD4Q8IYR2 804 aaPredicted RBP9.07□□□□□ -0.96
LINC00520-206ENST00000560336 NSUN7Q8NE18 718 aaKnown RBP9.07□□□□□ -0.96
LINC00520-206ENST00000560336 FAM161BQ96MY7 647 aa9.07□□□□□ -0.96
LINC00520-206ENST00000560336 TAOK3Q9H2K8 898 aa9.07□□□□□ -0.96
LINC00520-206ENST00000560336 ZNF287Q9HBT7 754 aa9.07□□□□□ -0.96
LINC00520-206ENST00000560336 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.07□□□□□ -0.96
LINC00520-206ENST00000560336 KIAA1324LA8MWY0 1029 aaPredicted RBP9.06□□□□□ -0.96
LINC00520-206ENST00000560336 RAD17O75943 681 aa9.06□□□□□ -0.96
LINC00520-206ENST00000560336 CDKL5O76039 1030 aa9.06□□□□□ -0.96
LINC00520-206ENST00000560336 F13A1P00488 732 aa9.06□□□□□ -0.96
LINC00520-206ENST00000560336 FGRP09769 529 aa9.06□□□□□ -0.96
LINC00520-206ENST00000560336 DAB2P98082 770 aa9.06□□□□□ -0.96
LINC00520-206ENST00000560336 FAM47AQ5JRC9 791 aa9.06□□□□□ -0.96
LINC00520-206ENST00000560336 IFIT1BQ5T764 474 aaKnown RBP9.06□□□□□ -0.96
LINC00520-206ENST00000560336 CDC42EP5Q6NZY7 148 aa9.06□□□□□ -0.96
LINC00520-206ENST00000560336 TTC6Q86TZ1 520 aa9.06□□□□□ -0.96
LINC00520-206ENST00000560336 SGMS1Q86VZ5 419 aa9.06□□□□□ -0.96
LINC00520-206ENST00000560336 CCDC144CPQ8IYA2 1237 aa9.06□□□□□ -0.96
LINC00520-206ENST00000560336 ZNF654Q8IZM8 581 aa9.06□□□□□ -0.96
LINC00520-206ENST00000560336 ZNF444Q8N0Y2 327 aaPredicted RBP9.06□□□□□ -0.96
LINC00520-206ENST00000560336 SMARCC2Q8TAQ2 1214 aa9.06□□□□□ -0.96
LINC00520-206ENST00000560336 NUP133Q8WUM0 1156 aa9.06□□□□□ -0.96
LINC00520-206ENST00000560336 JDP2Q8WYK2 163 aa9.06□□□□□ -0.96
LINC00520-206ENST00000560336 DYNLL2Q96FJ2 89 aa9.06□□□□□ -0.96
LINC00520-206ENST00000560336 ZDHHC15Q96MV8 337 aa9.06□□□□□ -0.96
LINC00520-206ENST00000560336 MYL10Q9BUA6 226 aa9.06□□□□□ -0.96
LINC00520-206ENST00000560336 SPON1Q9HCB6 807 aa9.06□□□□□ -0.96
LINC00520-206ENST00000560336 HDAC9Q9UKV0 1011 aa9.06□□□□□ -0.96
LINC00520-206ENST00000560336 CYP8B1Q9UNU6 501 aa9.06□□□□□ -0.96
LINC00520-206ENST00000560336 ATP6V1DQ9Y5K8 247 aa9.06□□□□□ -0.96
LINC00520-206ENST00000560336 CSADQ9Y600 493 aa9.06□□□□□ -0.96
LINC00520-206ENST00000560336 PSMD14O00487 310 aa9.05□□□□□ -0.96
LINC00520-206ENST00000560336 CTDNEP1O95476 244 aa9.05□□□□□ -0.96
LINC00520-206ENST00000560336 HLA-DOAP06340 250 aa9.05□□□□□ -0.96
LINC00520-206ENST00000560336 TSPY3P0CV98 308 aa9.05□□□□□ -0.96
LINC00520-206ENST00000560336 TSPY8P0CW00 308 aa9.05□□□□□ -0.96
LINC00520-206ENST00000560336 RXRAP19793 462 aa9.05□□□□□ -0.96
LINC00520-206ENST00000560336 NT5C2P49902 561 aa9.05□□□□□ -0.96
LINC00520-206ENST00000560336 ERVK-24P63145 666 aa9.05□□□□□ -0.96
LINC00520-206ENST00000560336 TFAP4Q01664 338 aa9.05□□□□□ -0.96
LINC00520-206ENST00000560336 SEC23AQ15436 765 aa9.05□□□□□ -0.96
LINC00520-206ENST00000560336 CCDC85BQ15834 202 aaPredicted RBP9.05□□□□□ -0.96
LINC00520-206ENST00000560336 CFAP100Q494V2 611 aa9.05□□□□□ -0.96
LINC00520-206ENST00000560336 CCDC178Q5BJE1 867 aa9.05□□□□□ -0.96
LINC00520-206ENST00000560336 CLEC17AQ6ZS10 378 aa9.05□□□□□ -0.96
LINC00520-206ENST00000560336 CATIPQ7Z7H3 387 aa9.05□□□□□ -0.96
LINC00520-206ENST00000560336 MRIQ9BWK5 157 aa9.05□□□□□ -0.96
LINC00520-206ENST00000560336 TMOD2Q9NZR1 351 aa9.05□□□□□ -0.96
LINC00520-206ENST00000560336 ORC3Q9UBD5 711 aaPredicted RBP9.05□□□□□ -0.96
LINC00520-206ENST00000560336 ZNRF3Q9ULT6 936 aa9.05□□□□□ -0.96
LINC00520-206ENST00000560336 MTMR6Q9Y217 621 aa9.05□□□□□ -0.96
LINC00520-206ENST00000560336 CCDC196A0A1B0GTZ2 297 aa9.04□□□□□ -0.96
LINC00520-206ENST00000560336 DCDC2CA8MYV0 355 aa9.04□□□□□ -0.96
LINC00520-206ENST00000560336 WDHD1O75717 1129 aaPredicted RBP9.04□□□□□ -0.96
LINC00520-206ENST00000560336 CALM1P0DP23 149 aa9.04□□□□□ -0.96
LINC00520-206ENST00000560336 CALM2P0DP24 149 aa9.04□□□□□ -0.96
LINC00520-206ENST00000560336 CALM3P0DP25 149 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms