RNA–Protein interactions for RNA: ENST00000559889.5

IDH3A-217, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 1 (best)

Gene IDH3A, Length 2,461 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-217ENST00000559889 SPRED2Q7Z698 418 aa10.32□□□□□ -0.76
IDH3A-217ENST00000559889 TMEM87AQ8NBN3 555 aa10.32□□□□□ -0.76
IDH3A-217ENST00000559889 DBF4BQ8NFT6 615 aa10.32□□□□□ -0.76
IDH3A-217ENST00000559889 ANP32BQ92688 251 aaKnown RBP10.32□□□□□ -0.76
IDH3A-217ENST00000559889 PHKBQ93100 1093 aa10.32□□□□□ -0.76
IDH3A-217ENST00000559889 EHMT1Q9H9B1 1298 aa10.32□□□□□ -0.76
IDH3A-217ENST00000559889 JPH1Q9HDC5 661 aaPredicted RBP10.32□□□□□ -0.76
IDH3A-217ENST00000559889 KIF3AQ9Y496 699 aa10.32□□□□□ -0.76
IDH3A-217ENST00000559889 EMSYQ7Z589 1322 aa10.32□□□□□ -0.76
IDH3A-217ENST00000559889 PTPRSQ13332 1948 aa10.31□□□□□ -0.76
IDH3A-217ENST00000559889 LCHNA4D1U4 455 aa10.31□□□□□ -0.76
IDH3A-217ENST00000559889 GOLGA6L4A6NEF3 574 aa10.31□□□□□ -0.76
IDH3A-217ENST00000559889 EPOPA6NHQ4 379 aa10.31□□□□□ -0.76
IDH3A-217ENST00000559889 FAM86B1E9PN63 330 aa10.31□□□□□ -0.76
IDH3A-217ENST00000559889 CAND2O75155 1236 aa10.31□□□□□ -0.76
IDH3A-217ENST00000559889 FAM86B2P0C5J1 330 aa10.31□□□□□ -0.76
IDH3A-217ENST00000559889 GNAT1P11488 350 aa10.31□□□□□ -0.76
IDH3A-217ENST00000559889 MARK3P27448 753 aa10.31□□□□□ -0.76
IDH3A-217ENST00000559889 ARHGAP4P98171 946 aa10.31□□□□□ -0.76
IDH3A-217ENST00000559889 CEBPZQ03701 1054 aaKnown RBP10.31□□□□□ -0.76
IDH3A-217ENST00000559889 PLEKHG4Q58EX7 1191 aa10.31□□□□□ -0.76
IDH3A-217ENST00000559889 MARCH8Q5T0T0 291 aa10.31□□□□□ -0.76
IDH3A-217ENST00000559889 LRSAM1Q6UWE0 723 aa10.31□□□□□ -0.76
IDH3A-217ENST00000559889 COL25A1Q9BXS0 654 aaPredicted RBP10.31□□□□□ -0.76
IDH3A-217ENST00000559889 GLT8D2Q9H1C3 349 aa10.31□□□□□ -0.76
IDH3A-217ENST00000559889 AGO4Q9HCK5 861 aaKnown RBP10.31□□□□□ -0.76
IDH3A-217ENST00000559889 ERAP1Q9NZ08 941 aa10.31□□□□□ -0.76
IDH3A-217ENST00000559889 MBLAC1A4D2B0 266 aaPredicted RBP10.31□□□□□ -0.76
IDH3A-217ENST00000559889 RFXAPO00287 272 aa10.31□□□□□ -0.76
IDH3A-217ENST00000559889 KCNJ6P48051 423 aa10.31□□□□□ -0.76
IDH3A-217ENST00000559889 C1QBPQ07021 282 aaKnown RBP10.31□□□□□ -0.76
IDH3A-217ENST00000559889 IKBKEQ14164 716 aa10.31□□□□□ -0.76
IDH3A-217ENST00000559889 JAKMIP3Q5VZ66 844 aa10.31□□□□□ -0.76
IDH3A-217ENST00000559889 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.31□□□□□ -0.76
IDH3A-217ENST00000559889 RUFY4Q6ZNE9 571 aa10.31□□□□□ -0.76
IDH3A-217ENST00000559889 RNF214Q8ND24 703 aa10.31□□□□□ -0.76
IDH3A-217ENST00000559889 SPATA32Q96LK8 384 aa10.31□□□□□ -0.76
IDH3A-217ENST00000559889 SMARCAD1Q9H4L7 1026 aa10.31□□□□□ -0.76
IDH3A-217ENST00000559889 PRDM6Q9NQX0 595 aa10.31□□□□□ -0.76
IDH3A-217ENST00000559889 SLC9A2Q9UBY0 812 aa10.31□□□□□ -0.76
IDH3A-217ENST00000559889 NFASCO94856 1347 aa10.31□□□□□ -0.76
IDH3A-217ENST00000559889 IGLV3-22A0A075B6J6 115 aa10.3□□□□□ -0.76
IDH3A-217ENST00000559889 TLL1O43897 1013 aa10.3□□□□□ -0.76
IDH3A-217ENST00000559889 GJB5O95377 273 aa10.3□□□□□ -0.76
IDH3A-217ENST00000559889 CTSHP09668 335 aa10.3□□□□□ -0.76
IDH3A-217ENST00000559889 IFNAR1P17181 557 aa10.3□□□□□ -0.76
IDH3A-217ENST00000559889 ACTR2P61160 394 aa10.3□□□□□ -0.76
IDH3A-217ENST00000559889 FAM26DQ5JW98 314 aa10.3□□□□□ -0.76
IDH3A-217ENST00000559889 RPAINQ86UA6 219 aa10.3□□□□□ -0.76
IDH3A-217ENST00000559889 GLG1Q92896 1179 aa10.3□□□□□ -0.76
IDH3A-217ENST00000559889 RBSNQ9H1K0 784 aa10.3□□□□□ -0.76
IDH3A-217ENST00000559889 CERS4Q9HA82 394 aa10.3□□□□□ -0.76
IDH3A-217ENST00000559889 KIF28PB7ZC32 967 aa10.3□□□□□ -0.76
IDH3A-217ENST00000559889 DHX15O43143 795 aaKnown RBP10.3□□□□□ -0.76
IDH3A-217ENST00000559889 EFCAB14O75071 495 aa10.3□□□□□ -0.76
IDH3A-217ENST00000559889 ATG7O95352 703 aa10.3□□□□□ -0.76
IDH3A-217ENST00000559889 CCNE2O96020 404 aa10.3□□□□□ -0.76
IDH3A-217ENST00000559889 CHRNA1P02708 482 aa10.3□□□□□ -0.76
IDH3A-217ENST00000559889 CYP3A4P08684 503 aa10.3□□□□□ -0.76
IDH3A-217ENST00000559889 IGFBP4P22692 258 aa10.3□□□□□ -0.76
IDH3A-217ENST00000559889 PPFIA1Q13136 1202 aa10.3□□□□□ -0.76
IDH3A-217ENST00000559889 GRIK4Q16099 956 aa10.3□□□□□ -0.76
IDH3A-217ENST00000559889 NIPA1Q7RTP0 329 aa10.3□□□□□ -0.76
IDH3A-217ENST00000559889 ZBTB10Q96DT7 871 aa10.3□□□□□ -0.76
IDH3A-217ENST00000559889 RNF26Q9BY78 433 aaPredicted RBP10.3□□□□□ -0.76
IDH3A-217ENST00000559889 IGKV6D-21A0A0A0MT36 114 aa10.29□□□□□ -0.76
IDH3A-217ENST00000559889 EDIL3O43854 480 aa10.29□□□□□ -0.76
IDH3A-217ENST00000559889 POU3F3P20264 500 aaPredicted RBP10.29□□□□□ -0.76
IDH3A-217ENST00000559889 PPM1EQ8WY54 764 aa10.29□□□□□ -0.76
IDH3A-217ENST00000559889 SDF4Q9BRK5 362 aa10.29□□□□□ -0.76
IDH3A-217ENST00000559889 SCAND2PQ9GZW5 306 aaPredicted RBP10.29□□□□□ -0.76
IDH3A-217ENST00000559889 TUBE1Q9UJT0 475 aa10.29□□□□□ -0.76
IDH3A-217ENST00000559889 INSRRP14616 1297 aa10.29□□□□□ -0.76
IDH3A-217ENST00000559889 MGAT3Q09327 533 aa10.29□□□□□ -0.76
IDH3A-217ENST00000559889 CCDC85BQ15834 202 aaPredicted RBP10.29□□□□□ -0.76
IDH3A-217ENST00000559889 CCDC183Q5T5S1 534 aa10.29□□□□□ -0.76
IDH3A-217ENST00000559889 TAF2Q6P1X5 1199 aa10.29□□□□□ -0.76
IDH3A-217ENST00000559889 PLPPR4Q7Z2D5 763 aa10.29□□□□□ -0.76
IDH3A-217ENST00000559889 REXO1Q8N1G1 1221 aaKnown RBP10.29□□□□□ -0.76
IDH3A-217ENST00000559889 RASGRP4Q8TDF6 673 aa10.29□□□□□ -0.76
IDH3A-217ENST00000559889 ARNTL2Q8WYA1 636 aa10.29□□□□□ -0.76
IDH3A-217ENST00000559889 RAD9AQ99638 391 aa10.29□□□□□ -0.76
IDH3A-217ENST00000559889 SLC26A6Q9BXS9 759 aa10.29□□□□□ -0.76
IDH3A-217ENST00000559889 ZSCAN16Q9H4T2 348 aaPredicted RBP10.29□□□□□ -0.76
IDH3A-217ENST00000559889 C6orf50Q9HD87 102 aa10.29□□□□□ -0.76
IDH3A-217ENST00000559889 ORC3Q9UBD5 711 aaPredicted RBP10.29□□□□□ -0.76
IDH3A-217ENST00000559889 MYO9BQ13459 2157 aa10.29□□□□□ -0.76
IDH3A-217ENST00000559889 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.28□□□□□ -0.76
IDH3A-217ENST00000559889 LPXNO60711 386 aa10.28□□□□□ -0.76
IDH3A-217ENST00000559889 RESTQ13127 1097 aa10.28□□□□□ -0.76
IDH3A-217ENST00000559889 PLCB4Q15147 1175 aa10.28□□□□□ -0.76
IDH3A-217ENST00000559889 CCDC12Q8WUD4 166 aaPredicted RBP10.28□□□□□ -0.76
IDH3A-217ENST00000559889 ZBED2Q9BTP6 218 aa10.28□□□□□ -0.76
IDH3A-217ENST00000559889 VPS54Q9P1Q0 977 aa10.28□□□□□ -0.76
IDH3A-217ENST00000559889 MTCH2Q9Y6C9 303 aa10.28□□□□□ -0.76
IDH3A-217ENST00000559889 FDPSP14324 419 aaKnown RBP10.28□□□□□ -0.76
IDH3A-217ENST00000559889 GNA11P29992 359 aa10.28□□□□□ -0.76
IDH3A-217ENST00000559889 ZNF76P36508 570 aa10.28□□□□□ -0.76
IDH3A-217ENST00000559889 STAT5BP51692 787 aa10.28□□□□□ -0.76
IDH3A-217ENST00000559889 KRT40Q6A162 431 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms