RNA–Protein interactions for RNA: ENST00000559340.1

LDLR-210, Transcript of low density lipoprotein receptor, humanhuman

TSL 5

Gene LDLR, Length 605 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-210ENST00000559340 CCDC73Q6ZRK6 1079 aa10.33□□□□□ -0.76
LDLR-210ENST00000559340 C7orf31Q8N865 590 aa10.33□□□□□ -0.76
LDLR-210ENST00000559340 DYDC2Q96IM9 177 aa10.33□□□□□ -0.76
LDLR-210ENST00000559340 HSD17B14Q9BPX1 270 aa10.33□□□□□ -0.76
LDLR-210ENST00000559340 JPH2Q9BR39 696 aaPredicted RBP10.33□□□□□ -0.76
LDLR-210ENST00000559340 C16orf70Q9BSU1 422 aa10.33□□□□□ -0.76
LDLR-210ENST00000559340 ANKEF1Q9NU02 776 aa10.33□□□□□ -0.76
LDLR-210ENST00000559340 DNM3Q9UQ16 869 aa10.33□□□□□ -0.76
LDLR-210ENST00000559340 MROH7Q68CQ1 1323 aa10.33□□□□□ -0.76
LDLR-210ENST00000559340 IGSF9BQ9UPX0 1349 aa10.33□□□□□ -0.76
LDLR-210ENST00000559340 COL1A2P08123 1366 aa10.32□□□□□ -0.76
LDLR-210ENST00000559340 POTEB3A0JP26 581 aa10.32□□□□□ -0.76
LDLR-210ENST00000559340 MYADML2A6NDP7 307 aa10.32□□□□□ -0.76
LDLR-210ENST00000559340 DDX11L8A8MPP1 907 aa10.32□□□□□ -0.76
LDLR-210ENST00000559340 HAS3O00219 553 aa10.32□□□□□ -0.76
LDLR-210ENST00000559340 OATP04181 439 aa10.32□□□□□ -0.76
LDLR-210ENST00000559340 RPLP2P05387 115 aaKnown RBP10.32□□□□□ -0.76
LDLR-210ENST00000559340 ZNF286BP0CG31 522 aa10.32□□□□□ -0.76
LDLR-210ENST00000559340 PTMSP20962 102 aa10.32□□□□□ -0.76
LDLR-210ENST00000559340 ITGA7Q13683 1181 aa10.32□□□□□ -0.76
LDLR-210ENST00000559340 CTTNQ14247 550 aaKnown RBP10.32□□□□□ -0.76
LDLR-210ENST00000559340 ZRSR1Q15695 479 aaKnown RBP10.32□□□□□ -0.76
LDLR-210ENST00000559340 HYIQ5T013 277 aa10.32□□□□□ -0.76
LDLR-210ENST00000559340 RRAGBQ5VZM2 374 aa10.32□□□□□ -0.76
LDLR-210ENST00000559340 NFRKBQ6P4R8 1299 aa10.32□□□□□ -0.76
LDLR-210ENST00000559340 POTEBQ6S5H4 581 aa10.32□□□□□ -0.76
LDLR-210ENST00000559340 CATSPER3Q86XQ3 398 aa10.32□□□□□ -0.76
LDLR-210ENST00000559340 CCDC60Q8IWA6 550 aaPredicted RBP10.32□□□□□ -0.76
LDLR-210ENST00000559340 BANK1Q8NDB2 785 aa10.32□□□□□ -0.76
LDLR-210ENST00000559340 ATP8B4Q8TF62 1192 aa10.32□□□□□ -0.76
LDLR-210ENST00000559340 CLIC6Q96NY7 704 aa10.32□□□□□ -0.76
LDLR-210ENST00000559340 PCYT2Q99447 389 aa10.32□□□□□ -0.76
LDLR-210ENST00000559340 LXNQ9BS40 222 aa10.32□□□□□ -0.76
LDLR-210ENST00000559340 NIFKQ9BYG3 293 aaKnown RBP10.32□□□□□ -0.76
LDLR-210ENST00000559340 LRRC27Q9C0I9 530 aa10.32□□□□□ -0.76
LDLR-210ENST00000559340 SENP6Q9GZR1 1112 aaPredicted RBP10.32□□□□□ -0.76
LDLR-210ENST00000559340 C11orf49Q9H6J7 331 aa10.32□□□□□ -0.76
LDLR-210ENST00000559340 RGL1Q9NZL6 768 aa10.32□□□□□ -0.76
LDLR-210ENST00000559340 USP25Q9UHP3 1055 aa10.32□□□□□ -0.76
LDLR-210ENST00000559340 TRPC6Q9Y210 931 aa10.32□□□□□ -0.76
LDLR-210ENST00000559340 NRCAMQ92823 1304 aa10.32□□□□□ -0.76
LDLR-210ENST00000559340 ARID2Q68CP9 1835 aa10.31□□□□□ -0.76
LDLR-210ENST00000559340 A0A1W2PQ45 241 aaPredicted RBP10.31□□□□□ -0.76
LDLR-210ENST00000559340 A0A1W2PQY0 241 aa10.31□□□□□ -0.76
LDLR-210ENST00000559340 ARVCFO00192 962 aa10.31□□□□□ -0.76
LDLR-210ENST00000559340 TLR3O15455 904 aaKnown RBP10.31□□□□□ -0.76
LDLR-210ENST00000559340 MAGEB2O15479 319 aa10.31□□□□□ -0.76
LDLR-210ENST00000559340 MED24O75448 989 aa10.31□□□□□ -0.76
LDLR-210ENST00000559340 PTGS1P23219 599 aa10.31□□□□□ -0.76
LDLR-210ENST00000559340 YWHABP31946 246 aaKnown RBP10.31□□□□□ -0.76
LDLR-210ENST00000559340 CHMP4BP1P59074 171 aa10.31□□□□□ -0.76
LDLR-210ENST00000559340 PRKCEQ02156 737 aa10.31□□□□□ -0.76
LDLR-210ENST00000559340 CYP4A11Q02928 519 aa10.31□□□□□ -0.76
LDLR-210ENST00000559340 PLCB4Q15147 1175 aa10.31□□□□□ -0.76
LDLR-210ENST00000559340 NBPF20Q3BBV1 942 aa10.31□□□□□ -0.76
LDLR-210ENST00000559340 XKR9Q5GH70 373 aa10.31□□□□□ -0.76
LDLR-210ENST00000559340 FAM47CQ5HY64 1035 aa10.31□□□□□ -0.76
LDLR-210ENST00000559340 AXDND1Q5T1B0 1012 aaPredicted RBP10.31□□□□□ -0.76
LDLR-210ENST00000559340 RESP18Q5W5W9 173 aa10.31□□□□□ -0.76
LDLR-210ENST00000559340 SESTD1Q86VW0 696 aa10.31□□□□□ -0.76
LDLR-210ENST00000559340 IQUBQ8NA54 791 aa10.31□□□□□ -0.76
LDLR-210ENST00000559340 TMEM87AQ8NBN3 555 aa10.31□□□□□ -0.76
LDLR-210ENST00000559340 SYMPKQ92797 1274 aaKnown RBP10.31□□□□□ -0.76
LDLR-210ENST00000559340 KAT2BQ92831 832 aa10.31□□□□□ -0.76
LDLR-210ENST00000559340 CUEDC2Q9H467 287 aa10.31□□□□□ -0.76
LDLR-210ENST00000559340 DDX19AQ9NUU7 478 aaKnown RBP10.31□□□□□ -0.76
LDLR-210ENST00000559340 STK17AQ9UEE5 414 aa10.31□□□□□ -0.76
LDLR-210ENST00000559340 SEPT9Q9UHD8 586 aaPredicted RBP10.31□□□□□ -0.76
LDLR-210ENST00000559340 DBR1Q9UK59 544 aaKnown RBP10.31□□□□□ -0.76
LDLR-210ENST00000559340 KIAA1024Q9UPX6 916 aa10.31□□□□□ -0.76
LDLR-210ENST00000559340 C17orf102A2RUQ5 167 aa10.3□□□□□ -0.76
LDLR-210ENST00000559340 ARHGEF35A5YM69 484 aa10.3□□□□□ -0.76
LDLR-210ENST00000559340 GAS2O43903 313 aaKnown RBP10.3□□□□□ -0.76
LDLR-210ENST00000559340 EYA4O95677 639 aa10.3□□□□□ -0.76
LDLR-210ENST00000559340 SPATA31C1P0DKV0 1188 aa10.3□□□□□ -0.76
LDLR-210ENST00000559340 MARK3P27448 753 aa10.3□□□□□ -0.76
LDLR-210ENST00000559340 TMOD1P28289 359 aa10.3□□□□□ -0.76
LDLR-210ENST00000559340 CDC25AP30304 524 aa10.3□□□□□ -0.76
LDLR-210ENST00000559340 RFC5P40937 340 aa10.3□□□□□ -0.76
LDLR-210ENST00000559340 STAT6P42226 847 aa10.3□□□□□ -0.76
LDLR-210ENST00000559340 UBE2HP62256 183 aa10.3□□□□□ -0.76
LDLR-210ENST00000559340 IRX5P78411 483 aaPredicted RBP10.3□□□□□ -0.76
LDLR-210ENST00000559340 AMPD3Q01432 767 aa10.3□□□□□ -0.76
LDLR-210ENST00000559340 GRIN1Q05586 938 aa10.3□□□□□ -0.76
LDLR-210ENST00000559340 PPFIA1Q13136 1202 aa10.3□□□□□ -0.76
LDLR-210ENST00000559340 ZNF710Q8N1W2 664 aa10.3□□□□□ -0.76
LDLR-210ENST00000559340 RETREG2Q8NC44 543 aa10.3□□□□□ -0.76
LDLR-210ENST00000559340 MRPS27Q92552 414 aaKnown RBP10.3□□□□□ -0.76
LDLR-210ENST00000559340 PAWRQ96IZ0 340 aaKnown RBP10.3□□□□□ -0.76
LDLR-210ENST00000559340 EPSTI1Q96J88 318 aa10.3□□□□□ -0.76
LDLR-210ENST00000559340 CEP170P1Q96L14 293 aa10.3□□□□□ -0.76
LDLR-210ENST00000559340 MMTAG2Q9BU76 263 aaKnown RBP10.3□□□□□ -0.76
LDLR-210ENST00000559340 RNPEPQ9H4A4 650 aa10.3□□□□□ -0.76
LDLR-210ENST00000559340 MAGEF1Q9HAY2 307 aa10.3□□□□□ -0.76
LDLR-210ENST00000559340 GDPD2Q9HCC8 539 aa10.3□□□□□ -0.76
LDLR-210ENST00000559340 BMP2KQ9NSY1 1161 aaPredicted RBP10.3□□□□□ -0.76
LDLR-210ENST00000559340 KCNH3Q9ULD8 1083 aa10.3□□□□□ -0.76
LDLR-210ENST00000559340 NOD1Q9Y239 953 aa10.3□□□□□ -0.76
LDLR-210ENST00000559340 PP2D1A8MPX8 630 aa10.29□□□□□ -0.76
LDLR-210ENST00000559340 DCDC2CA8MYV0 355 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms