RNA–Protein interactions for RNA: ENST00000559037.1

CASC4-207, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 680 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-207ENST00000559037 TNFRSF12AQ9NP84 129 aa6.49□□□□□ -1.37
CASC4-207ENST00000559037 CYP26B1Q9NR63 512 aa6.49□□□□□ -1.37
CASC4-207ENST00000559037 IMPACTQ9P2X3 320 aa6.49□□□□□ -1.37
CASC4-207ENST00000559037 APEX2Q9UBZ4 518 aa6.49□□□□□ -1.37
CASC4-207ENST00000559037 SRP68Q9UHB9 627 aaKnown RBP6.49□□□□□ -1.37
CASC4-207ENST00000559037 CACNA1SQ13698 1873 aa6.49□□□□□ -1.37
CASC4-207ENST00000559037 KRTAP4-8A0A0G2JLE6 195 aa6.48□□□□□ -1.37
CASC4-207ENST00000559037 A0A0G2JLW4 131 aa6.48□□□□□ -1.37
CASC4-207ENST00000559037 TEX51A0A1B0GUA7 166 aa6.48□□□□□ -1.37
CASC4-207ENST00000559037 SRGAP3O43295 1099 aa6.48□□□□□ -1.37
CASC4-207ENST00000559037 KLF4O43474 513 aa6.48□□□□□ -1.37
CASC4-207ENST00000559037 STK10O94804 968 aaKnown RBP6.48□□□□□ -1.37
CASC4-207ENST00000559037 STARD3NLO95772 234 aa6.48□□□□□ -1.37
CASC4-207ENST00000559037 TMEM253P0C7T8 217 aa6.48□□□□□ -1.37
CASC4-207ENST00000559037 PAMP19021 973 aa6.48□□□□□ -1.37
CASC4-207ENST00000559037 KCNA3P22001 575 aa6.48□□□□□ -1.37
CASC4-207ENST00000559037 RAP1GAPP47736 663 aa6.48□□□□□ -1.37
CASC4-207ENST00000559037 YBX1P67809 324 aaKnown RBP6.48□□□□□ -1.37
CASC4-207ENST00000559037 DDR1Q08345 913 aa6.48□□□□□ -1.37
CASC4-207ENST00000559037 NR1I3Q14994 352 aa6.48□□□□□ -1.37
CASC4-207ENST00000559037 RALBP1Q15311 655 aa6.48□□□□□ -1.37
CASC4-207ENST00000559037 DDR2Q16832 855 aa6.48□□□□□ -1.37
CASC4-207ENST00000559037 CKAP2LQ8IYA6 745 aa6.48□□□□□ -1.37
CASC4-207ENST00000559037 TTC5Q8N0Z6 440 aa6.48□□□□□ -1.37
CASC4-207ENST00000559037 COPS5Q92905 334 aa6.48□□□□□ -1.37
CASC4-207ENST00000559037 MRGPRX3Q96LB0 322 aa6.48□□□□□ -1.37
CASC4-207ENST00000559037 NKX2-4Q9H2Z4 354 aa6.48□□□□□ -1.37
CASC4-207ENST00000559037 PDLIM7Q9NR12 457 aa6.48□□□□□ -1.37
CASC4-207ENST00000559037 ZBTB1Q9Y2K1 713 aa6.48□□□□□ -1.37
CASC4-207ENST00000559037 CACNA1FO60840 1977 aa6.48□□□□□ -1.37
CASC4-207ENST00000559037 FER1L6Q2WGJ9 1857 aa6.47□□□□□ -1.37
CASC4-207ENST00000559037 BCORQ6W2J9 1755 aa6.47□□□□□ -1.37
CASC4-207ENST00000559037 POLRMTO00411 1230 aaKnown RBP6.47□□□□□ -1.37
CASC4-207ENST00000559037 KCNH1O95259 989 aa6.47□□□□□ -1.37
CASC4-207ENST00000559037 A1BGP04217 495 aa6.47□□□□□ -1.37
CASC4-207ENST00000559037 DPEP1P16444 411 aa6.47□□□□□ -1.37
CASC4-207ENST00000559037 ATP2B1P20020 1258 aa6.47□□□□□ -1.37
CASC4-207ENST00000559037 CANXP27824 592 aaKnown RBP6.47□□□□□ -1.37
CASC4-207ENST00000559037 HOXC12P31275 282 aa6.47□□□□□ -1.37
CASC4-207ENST00000559037 IL6STP40189 918 aaPredicted RBP6.47□□□□□ -1.37
CASC4-207ENST00000559037 RAB33AQ14088 237 aa6.47□□□□□ -1.37
CASC4-207ENST00000559037 DCTN1Q14203 1278 aa6.47□□□□□ -1.37
CASC4-207ENST00000559037 NFIXQ14938 502 aa6.47□□□□□ -1.37
CASC4-207ENST00000559037 TAF7Q15545 349 aaPredicted RBP6.47□□□□□ -1.37
CASC4-207ENST00000559037 SV2CQ496J9 727 aa6.47□□□□□ -1.37
CASC4-207ENST00000559037 IQCEQ6IPM2 695 aa6.47□□□□□ -1.37
CASC4-207ENST00000559037 MCM10Q7L590 875 aa6.47□□□□□ -1.37
CASC4-207ENST00000559037 ZNF605Q86T29 641 aa6.47□□□□□ -1.37
CASC4-207ENST00000559037 HNRNPLLQ8WVV9 542 aaKnown RBP6.47□□□□□ -1.37
CASC4-207ENST00000559037 RTF1Q92541 710 aaKnown RBP6.47□□□□□ -1.37
CASC4-207ENST00000559037 ZNF669Q96BR6 464 aaPredicted RBP6.47□□□□□ -1.37
CASC4-207ENST00000559037 MCMBPQ9BTE3 642 aa6.47□□□□□ -1.37
CASC4-207ENST00000559037 LRP2BPQ9P2M1 347 aa6.47□□□□□ -1.37
CASC4-207ENST00000559037 USP16Q9Y5T5 823 aa6.47□□□□□ -1.37
CASC4-207ENST00000559037 SLX4Q8IY92 1834 aa6.47□□□□□ -1.37
CASC4-207ENST00000559037 C10orf71Q711Q0 1435 aa6.47□□□□□ -1.37
CASC4-207ENST00000559037 PXDNLA1KZ92 1463 aa6.47□□□□□ -1.37
CASC4-207ENST00000559037 LAMB4A4D0S4 1761 aa6.46□□□□□ -1.37
CASC4-207ENST00000559037 COL15A1P39059 1388 aa6.46□□□□□ -1.37
CASC4-207ENST00000559037 NPHP3-ACAD11A0A0J9YXS1 232 aa6.46□□□□□ -1.38
CASC4-207ENST00000559037 A0A1W2PQJ5 194 aa6.46□□□□□ -1.38
CASC4-207ENST00000559037 IQCA1LA6NCM1 817 aa6.46□□□□□ -1.38
CASC4-207ENST00000559037 DBX1A6NMT0 343 aa6.46□□□□□ -1.38
CASC4-207ENST00000559037 VAMP4O75379 141 aa6.46□□□□□ -1.38
CASC4-207ENST00000559037 GJB6O95452 261 aa6.46□□□□□ -1.38
CASC4-207ENST00000559037 EFEMP2O95967 443 aa6.46□□□□□ -1.38
CASC4-207ENST00000559037 CPP00450 1065 aa6.46□□□□□ -1.38
CASC4-207ENST00000559037 SNRPA1P09661 255 aaKnown RBP6.46□□□□□ -1.38
CASC4-207ENST00000559037 SF3A1Q15459 793 aaKnown RBP6.46□□□□□ -1.38
CASC4-207ENST00000559037 DPY19L1Q2PZI1 675 aa6.46□□□□□ -1.38
CASC4-207ENST00000559037 E4F1Q66K89 784 aaPredicted RBP6.46□□□□□ -1.38
CASC4-207ENST00000559037 GTF2IRD2BQ6EKJ0 949 aa6.46□□□□□ -1.38
CASC4-207ENST00000559037 GTF2IRD2Q86UP8 949 aa6.46□□□□□ -1.38
CASC4-207ENST00000559037 CABP7Q86V35 215 aa6.46□□□□□ -1.38
CASC4-207ENST00000559037 ZNF227Q86WZ6 799 aa6.46□□□□□ -1.38
CASC4-207ENST00000559037 ST13P5Q8NFI4 369 aaPredicted RBP6.46□□□□□ -1.38
CASC4-207ENST00000559037 PPP1R14AQ96A00 147 aa6.46□□□□□ -1.38
CASC4-207ENST00000559037 SGSM3Q96HU1 749 aa6.46□□□□□ -1.38
CASC4-207ENST00000559037 MMP19Q99542 508 aa6.46□□□□□ -1.38
CASC4-207ENST00000559037 TRIM55Q9BYV6 548 aa6.46□□□□□ -1.38
CASC4-207ENST00000559037 TANGO6Q9C0B7 1094 aa6.46□□□□□ -1.38
CASC4-207ENST00000559037 PNNQ9H307 717 aaKnown RBP6.46□□□□□ -1.38
CASC4-207ENST00000559037 MIS18AQ9NYP9 233 aa6.46□□□□□ -1.38
CASC4-207ENST00000559037 ARFGEF2Q9Y6D5 1785 aa6.45□□□□□ -1.38
CASC4-207ENST00000559037 PRAMEF22A3QJZ6 481 aa6.45□□□□□ -1.38
CASC4-207ENST00000559037 TCAF2A6NFQ2 919 aa6.45□□□□□ -1.38
CASC4-207ENST00000559037 B2RBV5 119 aa6.45□□□□□ -1.38
CASC4-207ENST00000559037 CYBBP04839 570 aa6.45□□□□□ -1.38
CASC4-207ENST00000559037 SERPINB2P05120 415 aa6.45□□□□□ -1.38
CASC4-207ENST00000559037 SCG5P05408 212 aa6.45□□□□□ -1.38
CASC4-207ENST00000559037 MVKQ03426 396 aa6.45□□□□□ -1.38
CASC4-207ENST00000559037 CBX2Q14781 532 aaPredicted RBP6.45□□□□□ -1.38
CASC4-207ENST00000559037 NFE2L2Q16236 605 aa6.45□□□□□ -1.38
CASC4-207ENST00000559037 KRTAP19-4Q3LI73 84 aa6.45□□□□□ -1.38
CASC4-207ENST00000559037 MRM1Q6IN84 353 aaKnown RBP6.45□□□□□ -1.38
CASC4-207ENST00000559037 SIRT2Q8IXJ6 389 aa6.45□□□□□ -1.38
CASC4-207ENST00000559037 KCNN1Q92952 543 aa6.45□□□□□ -1.38
CASC4-207ENST00000559037 TOX2Q96NM4 488 aa6.45□□□□□ -1.38
CASC4-207ENST00000559037 MCOLN1Q9GZU1 580 aa6.45□□□□□ -1.38
CASC4-207ENST00000559037 SCN7AQ01118 1682 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms