RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 XRCC6P12956 609 aaKnown RBP eCLIP20.18■□□□□ 0.82
CLPX-203ENST00000558958 AFMP43652 599 aa20.18■□□□□ 0.82
CLPX-203ENST00000558958 CTCFP49711 727 aaPredicted RBP20.18■□□□□ 0.82
CLPX-203ENST00000558958 STAT5BP51692 787 aa20.18■□□□□ 0.82
CLPX-203ENST00000558958 POSTNQ15063 836 aa20.18■□□□□ 0.82
CLPX-203ENST00000558958 RBM43Q6ZSC3 357 aaKnown RBP20.18■□□□□ 0.82
CLPX-203ENST00000558958 AP5M1Q9H0R1 490 aa20.18■□□□□ 0.82
CLPX-203ENST00000558958 AZI2Q9H6S1 392 aa20.18■□□□□ 0.82
CLPX-203ENST00000558958 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.18■□□□□ 0.82
CLPX-203ENST00000558958 MMP3P08254 477 aa20.18■□□□□ 0.82
CLPX-203ENST00000558958 ATP4AP20648 1035 aa20.18■□□□□ 0.82
CLPX-203ENST00000558958 YWHABP31946 246 aaKnown RBP20.18■□□□□ 0.82
CLPX-203ENST00000558958 LBX1P52954 281 aa20.18■□□□□ 0.82
CLPX-203ENST00000558958 SLC12A3P55017 1021 aa20.18■□□□□ 0.82
CLPX-203ENST00000558958 PRKCEQ02156 737 aa20.18■□□□□ 0.82
CLPX-203ENST00000558958 PNOCQ13519 176 aa20.18■□□□□ 0.82
CLPX-203ENST00000558958 UTP14CQ5TAP6 766 aaKnown RBP20.18■□□□□ 0.82
CLPX-203ENST00000558958 PLPPR4Q7Z2D5 763 aa20.18■□□□□ 0.82
CLPX-203ENST00000558958 SYT2Q8N9I0 419 aaPredicted RBP20.18■□□□□ 0.82
CLPX-203ENST00000558958 BHMT2Q9H2M3 363 aa20.18■□□□□ 0.82
CLPX-203ENST00000558958 DBR1Q9UK59 544 aaKnown RBP20.18■□□□□ 0.82
CLPX-203ENST00000558958 CENPFP49454 3210 aa20.17■□□□□ 0.82
CLPX-203ENST00000558958 WDR81Q562E7 1941 aa20.17■□□□□ 0.82
CLPX-203ENST00000558958 LGALS2P05162 132 aa20.17■□□□□ 0.82
CLPX-203ENST00000558958 PRR29P0C7W0 189 aa20.17■□□□□ 0.82
CLPX-203ENST00000558958 RARBP10826 455 aa20.17■□□□□ 0.82
CLPX-203ENST00000558958 AMPD3Q01432 767 aa20.17■□□□□ 0.82
CLPX-203ENST00000558958 DHX8Q14562 1220 aaKnown RBP20.17■□□□□ 0.82
CLPX-203ENST00000558958 DGKDQ16760 1214 aa20.17■□□□□ 0.82
CLPX-203ENST00000558958 ZSCAN23Q3MJ62 389 aa20.17■□□□□ 0.82
CLPX-203ENST00000558958 ANO5Q75V66 913 aa20.17■□□□□ 0.82
CLPX-203ENST00000558958 TRIM50Q86XT4 487 aa20.17■□□□□ 0.82
CLPX-203ENST00000558958 CKAP2LQ8IYA6 745 aa20.17■□□□□ 0.82
CLPX-203ENST00000558958 GLG1Q92896 1179 aa20.17■□□□□ 0.82
CLPX-203ENST00000558958 GZF1Q9H116 711 aaPredicted RBP20.17■□□□□ 0.82
CLPX-203ENST00000558958 SMARCAD1Q9H4L7 1026 aa20.17■□□□□ 0.82
CLPX-203ENST00000558958 ANKEF1Q9NU02 776 aa20.17■□□□□ 0.82
CLPX-203ENST00000558958 GTPBP6O43824 516 aaPredicted RBP20.16■□□□□ 0.82
CLPX-203ENST00000558958 LETM1O95202 739 aaPredicted RBP20.16■□□□□ 0.82
CLPX-203ENST00000558958 SSBP05455 408 aaKnown RBP eCLIP20.16■□□□□ 0.82
CLPX-203ENST00000558958 MYL1P05976 194 aa20.16■□□□□ 0.82
CLPX-203ENST00000558958 CPT1AP50416 773 aa20.16■□□□□ 0.82
CLPX-203ENST00000558958 GJA9P57773 515 aa20.16■□□□□ 0.82
CLPX-203ENST00000558958 NKX3-2P78367 333 aa20.16■□□□□ 0.82
CLPX-203ENST00000558958 DPYDQ12882 1025 aa20.16■□□□□ 0.82
CLPX-203ENST00000558958 XKR3Q5GH77 459 aa20.16■□□□□ 0.82
CLPX-203ENST00000558958 CTU1Q7Z7A3 348 aaKnown RBP20.16■□□□□ 0.82
CLPX-203ENST00000558958 ERCC4Q92889 916 aaPredicted RBP20.16■□□□□ 0.82
CLPX-203ENST00000558958 C7orf25Q9BPX7 421 aa20.16■□□□□ 0.82
CLPX-203ENST00000558958 LRRC27Q9C0I9 530 aa20.16■□□□□ 0.82
CLPX-203ENST00000558958 UPF3AQ9H1J1 476 aaKnown RBP20.16■□□□□ 0.82
CLPX-203ENST00000558958 KIAA1468Q9P260 1216 aa20.16■□□□□ 0.82
CLPX-203ENST00000558958 MYMKA6NI61 221 aa20.15■□□□□ 0.82
CLPX-203ENST00000558958 OATP04181 439 aa20.15■□□□□ 0.82
CLPX-203ENST00000558958 CASP1P29466 404 aa20.15■□□□□ 0.82
CLPX-203ENST00000558958 SLC26A2P50443 739 aa20.15■□□□□ 0.82
CLPX-203ENST00000558958 IRX5P78411 483 aaPredicted RBP20.15■□□□□ 0.82
CLPX-203ENST00000558958 CUL4BQ13620 913 aa20.15■□□□□ 0.82
CLPX-203ENST00000558958 BRDTQ58F21 947 aaPredicted RBP20.15■□□□□ 0.82
CLPX-203ENST00000558958 OTUD6AQ7L8S5 288 aa20.15■□□□□ 0.82
CLPX-203ENST00000558958 SPATA20Q8TB22 786 aa20.15■□□□□ 0.82
CLPX-203ENST00000558958 SH3TC2Q8TF17 1288 aa20.15■□□□□ 0.82
CLPX-203ENST00000558958 C16orf70Q9BSU1 422 aa20.15■□□□□ 0.82
CLPX-203ENST00000558958 TRIM9Q9C026 710 aa20.15■□□□□ 0.82
CLPX-203ENST00000558958 BLZF1Q9H2G9 400 aa20.15■□□□□ 0.82
CLPX-203ENST00000558958 DDX20Q9UHI6 824 aaKnown RBP20.15■□□□□ 0.82
CLPX-203ENST00000558958 SYNRGQ9UMZ2 1314 aa20.15■□□□□ 0.82
CLPX-203ENST00000558958 MYH9P35579 1960 aaKnown RBP20.15■□□□□ 0.82
CLPX-203ENST00000558958 TMEM150BA6NC51 233 aa20.14■□□□□ 0.81
CLPX-203ENST00000558958 CYP11B2P19099 503 aa20.14■□□□□ 0.81
CLPX-203ENST00000558958 RARRES1P49788 294 aa20.14■□□□□ 0.81
CLPX-203ENST00000558958 FSCN1Q16658 493 aaKnown RBP20.14■□□□□ 0.81
CLPX-203ENST00000558958 ARSHQ5FYA8 562 aa20.14■□□□□ 0.81
CLPX-203ENST00000558958 CNNM4Q6P4Q7 775 aa20.14■□□□□ 0.81
CLPX-203ENST00000558958 TRMT1LQ7Z2T5 733 aaKnown RBP20.14■□□□□ 0.81
CLPX-203ENST00000558958 GPBP1Q86WP2 473 aa20.14■□□□□ 0.81
CLPX-203ENST00000558958 FAM167AQ96KS9 214 aa20.14■□□□□ 0.81
CLPX-203ENST00000558958 HMX1Q9NP08 348 aaPredicted RBP20.14■□□□□ 0.81
CLPX-203ENST00000558958 ERAP1Q9NZ08 941 aa20.14■□□□□ 0.81
CLPX-203ENST00000558958 PCDHA5Q9Y5H7 936 aa20.14■□□□□ 0.81
CLPX-203ENST00000558958 SYCE3A1L190 88 aa20.13■□□□□ 0.81
CLPX-203ENST00000558958 ARHGEF35A5YM69 484 aa20.13■□□□□ 0.81
CLPX-203ENST00000558958 ZNF286BP0CG31 522 aa20.13■□□□□ 0.81
CLPX-203ENST00000558958 SARSP49591 514 aaKnown RBP20.13■□□□□ 0.81
CLPX-203ENST00000558958 BEX3Q00994 111 aa20.13■□□□□ 0.81
CLPX-203ENST00000558958 XKR9Q5GH70 373 aa20.13■□□□□ 0.81
CLPX-203ENST00000558958 PLA2G4FQ68DD2 849 aa20.13■□□□□ 0.81
CLPX-203ENST00000558958 RINT1Q6NUQ1 792 aa20.13■□□□□ 0.81
CLPX-203ENST00000558958 ATP8B4Q8TF62 1192 aa20.13■□□□□ 0.81
CLPX-203ENST00000558958 DDX12PQ92771 950 aa20.13■□□□□ 0.81
CLPX-203ENST00000558958 RUSC1Q9BVN2 902 aa20.13■□□□□ 0.81
CLPX-203ENST00000558958 NIFKQ9BYG3 293 aaKnown RBP20.13■□□□□ 0.81
CLPX-203ENST00000558958 SPC25Q9HBM1 224 aa20.13■□□□□ 0.81
CLPX-203ENST00000558958 XPNPEP3Q9NQH7 507 aa20.13■□□□□ 0.81
CLPX-203ENST00000558958 NRBP2Q9NSY0 501 aa20.13■□□□□ 0.81
CLPX-203ENST00000558958 SEPT9Q9UHD8 586 aaPredicted RBP20.13■□□□□ 0.81
CLPX-203ENST00000558958 TUBE1Q9UJT0 475 aa20.13■□□□□ 0.81
CLPX-203ENST00000558958 MSCO60682 206 aa20.12■□□□□ 0.81
CLPX-203ENST00000558958 ADAMTS4O75173 837 aa20.12■□□□□ 0.81
CLPX-203ENST00000558958 SMC2O95347 1197 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms