RNA–Protein interactions for RNA: ENST00000558731.1

CSPG4P5-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 5, humanhuman

BASIC

Gene CSPG4P5, Length 3,730 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5-201ENST00000558731 CCP110O43303 1012 aa11.91□□□□□ -0.5
CSPG4P5-201ENST00000558731 CYP3A4P08684 503 aa11.91□□□□□ -0.5
CSPG4P5-201ENST00000558731 MMP14P50281 582 aa11.91□□□□□ -0.5
CSPG4P5-201ENST00000558731 CYP27A1Q02318 531 aa11.91□□□□□ -0.5
CSPG4P5-201ENST00000558731 SWSAP1Q6NVH7 229 aa11.91□□□□□ -0.5
CSPG4P5-201ENST00000558731 MNS1Q8NEH6 495 aa11.91□□□□□ -0.5
CSPG4P5-201ENST00000558731 OR8K1Q8NGG5 319 aa11.91□□□□□ -0.5
CSPG4P5-201ENST00000558731 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.91□□□□□ -0.5
CSPG4P5-201ENST00000558731 KIFC3Q9BVG8 833 aa11.91□□□□□ -0.5
CSPG4P5-201ENST00000558731 SEPT9Q9UHD8 586 aaPredicted RBP11.91□□□□□ -0.5
CSPG4P5-201ENST00000558731 SNCAIPQ9Y6H5 919 aa11.91□□□□□ -0.5
CSPG4P5-201ENST00000558731 COL2A1P02458 1487 aaPredicted RBP11.91□□□□□ -0.5
CSPG4P5-201ENST00000558731 POTEB2H3BUK9 544 aa11.91□□□□□ -0.5
CSPG4P5-201ENST00000558731 AKR1B10O60218 316 aa11.91□□□□□ -0.5
CSPG4P5-201ENST00000558731 HIP1RO75146 1068 aa11.91□□□□□ -0.5
CSPG4P5-201ENST00000558731 PSMD2Q13200 908 aa11.91□□□□□ -0.5
CSPG4P5-201ENST00000558731 RAPGEF1Q13905 1077 aa11.91□□□□□ -0.5
CSPG4P5-201ENST00000558731 EPHA7Q15375 998 aa11.91□□□□□ -0.5
CSPG4P5-201ENST00000558731 VWA3BQ502W6 1294 aa11.91□□□□□ -0.5
CSPG4P5-201ENST00000558731 CENPPQ6IPU0 288 aa11.91□□□□□ -0.5
CSPG4P5-201ENST00000558731 CRYGNQ8WXF5 182 aa11.91□□□□□ -0.5
CSPG4P5-201ENST00000558731 SLC5A5Q92911 643 aa11.91□□□□□ -0.5
CSPG4P5-201ENST00000558731 LSM14BQ9BX40 385 aaKnown RBP11.91□□□□□ -0.5
CSPG4P5-201ENST00000558731 PEX3P56589 373 aa11.91□□□□□ -0.5
CSPG4P5-201ENST00000558731 MAP3K10Q02779 954 aa11.91□□□□□ -0.5
CSPG4P5-201ENST00000558731 LRRC63Q05C16 580 aa11.91□□□□□ -0.5
CSPG4P5-201ENST00000558731 ZNF569Q5MCW4 686 aa11.91□□□□□ -0.5
CSPG4P5-201ENST00000558731 CYFIP1Q7L576 1253 aa11.91□□□□□ -0.5
CSPG4P5-201ENST00000558731 CEP170P1Q96L14 293 aa11.91□□□□□ -0.5
CSPG4P5-201ENST00000558731 MARK3P27448 753 aa11.9□□□□□ -0.5
CSPG4P5-201ENST00000558731 CASQ1P31415 396 aa11.9□□□□□ -0.5
CSPG4P5-201ENST00000558731 MATR3P43243 847 aaKnown RBP eCLIP11.9□□□□□ -0.5
CSPG4P5-201ENST00000558731 QARSP47897 775 aaKnown RBP11.9□□□□□ -0.5
CSPG4P5-201ENST00000558731 HSD17B4P51659 736 aa11.9□□□□□ -0.5
CSPG4P5-201ENST00000558731 POLR2FP61218 127 aaKnown RBP11.9□□□□□ -0.5
CSPG4P5-201ENST00000558731 MAN2A1Q16706 1144 aa11.9□□□□□ -0.5
CSPG4P5-201ENST00000558731 MTERF2Q49AM1 385 aa11.9□□□□□ -0.5
CSPG4P5-201ENST00000558731 CATSPERGQ6ZRH7 1159 aa11.9□□□□□ -0.5
CSPG4P5-201ENST00000558731 OPTNQ96CV9 577 aa11.9□□□□□ -0.5
CSPG4P5-201ENST00000558731 SLC10A4Q96EP9 437 aa11.9□□□□□ -0.5
CSPG4P5-201ENST00000558731 ZNF668Q96K58 619 aaPredicted RBP11.9□□□□□ -0.5
CSPG4P5-201ENST00000558731 AGO4Q9HCK5 861 aaKnown RBP11.9□□□□□ -0.5
CSPG4P5-201ENST00000558731 ARMCX3Q9UH62 379 aaPredicted RBP11.9□□□□□ -0.5
CSPG4P5-201ENST00000558731 EXOC3O60645 756 aa11.9□□□□□ -0.5
CSPG4P5-201ENST00000558731 P4HBP07237 508 aaKnown RBP11.9□□□□□ -0.5
CSPG4P5-201ENST00000558731 CASP4P49662 377 aa11.9□□□□□ -0.5
CSPG4P5-201ENST00000558731 CYP26C1Q6V0L0 522 aa11.9□□□□□ -0.5
CSPG4P5-201ENST00000558731 BICD1Q96G01 975 aa11.9□□□□□ -0.5
CSPG4P5-201ENST00000558731 CCDC42Q96M95 316 aa11.9□□□□□ -0.5
CSPG4P5-201ENST00000558731 HSD17B14Q9BPX1 270 aa11.9□□□□□ -0.5
CSPG4P5-201ENST00000558731 JADE2Q9NQC1 790 aa11.9□□□□□ -0.5
CSPG4P5-201ENST00000558731 ZNF214Q9UL59 606 aaPredicted RBP11.9□□□□□ -0.5
CSPG4P5-201ENST00000558731 TELO2Q9Y4R8 837 aa11.9□□□□□ -0.5
CSPG4P5-201ENST00000558731 MACROD2A1Z1Q3 448 aa11.9□□□□□ -0.5
CSPG4P5-201ENST00000558731 KIF5CO60282 957 aa11.9□□□□□ -0.5
CSPG4P5-201ENST00000558731 CYP2C8P10632 490 aa11.9□□□□□ -0.5
CSPG4P5-201ENST00000558731 HARSP12081 509 aaKnown RBP11.9□□□□□ -0.5
CSPG4P5-201ENST00000558731 YWHABP31946 246 aaKnown RBP11.9□□□□□ -0.5
CSPG4P5-201ENST00000558731 UGCGQ16739 394 aa11.9□□□□□ -0.5
CSPG4P5-201ENST00000558731 KNOP1Q1ED39 458 aaKnown RBP11.9□□□□□ -0.5
CSPG4P5-201ENST00000558731 GNPTABQ3T906 1256 aa11.9□□□□□ -0.5
CSPG4P5-201ENST00000558731 ANKRD13AQ8IZ07 590 aa11.9□□□□□ -0.5
CSPG4P5-201ENST00000558731 ANKRD13CQ8N6S4 541 aa11.9□□□□□ -0.5
CSPG4P5-201ENST00000558731 MBOAT7Q96N66 472 aa11.9□□□□□ -0.5
CSPG4P5-201ENST00000558731 SPAG5Q96R06 1193 aa11.9□□□□□ -0.5
CSPG4P5-201ENST00000558731 SEPT11Q9NVA2 429 aaKnown RBP11.9□□□□□ -0.5
CSPG4P5-201ENST00000558731 AFG3L2Q9Y4W6 797 aa11.9□□□□□ -0.5
CSPG4P5-201ENST00000558731 POLR2AP24928 1970 aaKnown RBP11.89□□□□□ -0.51
CSPG4P5-201ENST00000558731 GOLGA8IPA6NC78 632 aa11.89□□□□□ -0.51
CSPG4P5-201ENST00000558731 GOLGA8JA6NMD2 632 aa11.89□□□□□ -0.51
CSPG4P5-201ENST00000558731 SLC16A4O15374 487 aa11.89□□□□□ -0.51
CSPG4P5-201ENST00000558731 EPB41P11171 864 aaKnown RBP11.89□□□□□ -0.51
CSPG4P5-201ENST00000558731 TBX2Q13207 712 aaPredicted RBP11.89□□□□□ -0.51
CSPG4P5-201ENST00000558731 PCNX4Q63HM2 1172 aa11.89□□□□□ -0.51
CSPG4P5-201ENST00000558731 POLR3CQ9BUI4 534 aaPredicted RBP11.89□□□□□ -0.51
CSPG4P5-201ENST00000558731 TUFT1Q9NNX1 390 aa11.89□□□□□ -0.51
CSPG4P5-201ENST00000558731 CCDC66A2RUB6 948 aa11.89□□□□□ -0.51
CSPG4P5-201ENST00000558731 WDR64B1ANS9 1081 aa11.89□□□□□ -0.51
CSPG4P5-201ENST00000558731 TISP43B9A030 160 aa11.89□□□□□ -0.51
CSPG4P5-201ENST00000558731 CALUO43852 315 aaPredicted RBP11.89□□□□□ -0.51
CSPG4P5-201ENST00000558731 ERVK-24P63145 666 aa11.89□□□□□ -0.51
CSPG4P5-201ENST00000558731 FSTL1Q12841 308 aa11.89□□□□□ -0.51
CSPG4P5-201ENST00000558731 ARMC9Q7Z3E5 817 aa11.89□□□□□ -0.51
CSPG4P5-201ENST00000558731 RBM46Q8TBY0 533 aaKnown RBP11.89□□□□□ -0.51
CSPG4P5-201ENST00000558731 TRIM10Q9UDY6 481 aa11.89□□□□□ -0.51
CSPG4P5-201ENST00000558731 USP20Q9Y2K6 914 aa11.89□□□□□ -0.51
CSPG4P5-201ENST00000558731 PLA2G6O60733 806 aa11.89□□□□□ -0.51
CSPG4P5-201ENST00000558731 XRCC5P13010 732 aaKnown RBP11.89□□□□□ -0.51
CSPG4P5-201ENST00000558731 RIT2Q99578 217 aa11.89□□□□□ -0.51
CSPG4P5-201ENST00000558731 LARSQ9P2J5 1176 aaKnown RBP11.89□□□□□ -0.51
CSPG4P5-201ENST00000558731 EPHB6O15197 1021 aa11.88□□□□□ -0.51
CSPG4P5-201ENST00000558731 NR3C1P04150 777 aa11.88□□□□□ -0.51
CSPG4P5-201ENST00000558731 PLEKP08567 350 aaPredicted RBP11.88□□□□□ -0.51
CSPG4P5-201ENST00000558731 USP8P40818 1118 aa11.88□□□□□ -0.51
CSPG4P5-201ENST00000558731 PPP2R5CQ13362 524 aa11.88□□□□□ -0.51
CSPG4P5-201ENST00000558731 SPA17Q15506 151 aa11.88□□□□□ -0.51
CSPG4P5-201ENST00000558731 TMEM132AQ24JP5 1023 aa11.88□□□□□ -0.51
CSPG4P5-201ENST00000558731 TAF3Q5VWG9 929 aa11.88□□□□□ -0.51
CSPG4P5-201ENST00000558731 STXBP4Q6ZWJ1 553 aa11.88□□□□□ -0.51
CSPG4P5-201ENST00000558731 TMTC1Q8IUR5 882 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms