RNA–Protein interactions for RNA: ENST00000558662.5

HMBOX1-212, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-212ENST00000558662 NLRP5P59047 1200 aa17.61■□□□□ 0.41
HMBOX1-212ENST00000558662 TRIM28Q13263 835 aaKnown RBP17.61■□□□□ 0.41
HMBOX1-212ENST00000558662 SNX1Q13596 522 aa17.61■□□□□ 0.41
HMBOX1-212ENST00000558662 DHX34Q14147 1143 aaKnown RBP17.61■□□□□ 0.41
HMBOX1-212ENST00000558662 TMTC3Q6ZXV5 915 aa17.61■□□□□ 0.41
HMBOX1-212ENST00000558662 ANKRD13CQ8N6S4 541 aa17.61■□□□□ 0.41
HMBOX1-212ENST00000558662 CNBD1Q8NA66 436 aa17.61■□□□□ 0.41
HMBOX1-212ENST00000558662 MDM1Q8TC05 714 aa17.61■□□□□ 0.41
HMBOX1-212ENST00000558662 EPAS1Q99814 870 aa17.61■□□□□ 0.41
HMBOX1-212ENST00000558662 PIH1D3Q9NQM4 214 aaKnown RBP17.61■□□□□ 0.41
HMBOX1-212ENST00000558662 CYP39A1Q9NYL5 469 aa17.61■□□□□ 0.41
HMBOX1-212ENST00000558662 NOC2LQ9Y3T9 749 aaKnown RBP17.61■□□□□ 0.41
HMBOX1-212ENST00000558662 C2CD2Q9Y426 696 aa17.61■□□□□ 0.41
HMBOX1-212ENST00000558662 SLC4A7Q9Y6M7 1214 aa17.61■□□□□ 0.41
HMBOX1-212ENST00000558662 V9GY48 417 aaPredicted RBP17.61■□□□□ 0.41
HMBOX1-212ENST00000558662 RIC1Q4ADV7 1423 aa17.6■□□□□ 0.41
HMBOX1-212ENST00000558662 GLI3P10071 1580 aa17.6■□□□□ 0.41
HMBOX1-212ENST00000558662 PLCH1Q4KWH8 1693 aa17.6■□□□□ 0.41
HMBOX1-212ENST00000558662 GSG1L2A8MUP6 293 aa17.6■□□□□ 0.41
HMBOX1-212ENST00000558662 WNT7AO00755 349 aa17.6■□□□□ 0.41
HMBOX1-212ENST00000558662 HNRNPCL1O60812 293 aaKnown RBP17.6■□□□□ 0.41
HMBOX1-212ENST00000558662 UNC5CO95185 931 aa17.6■□□□□ 0.41
HMBOX1-212ENST00000558662 EYA4O95677 639 aa17.6■□□□□ 0.41
HMBOX1-212ENST00000558662 CSF1RP07333 972 aa17.6■□□□□ 0.41
HMBOX1-212ENST00000558662 NT5C2P49902 561 aa17.6■□□□□ 0.41
HMBOX1-212ENST00000558662 PEX5P50542 639 aa17.6■□□□□ 0.41
HMBOX1-212ENST00000558662 CNGA2Q16280 664 aa17.6■□□□□ 0.41
HMBOX1-212ENST00000558662 SLFN11Q7Z7L1 901 aa17.6■□□□□ 0.41
HMBOX1-212ENST00000558662 CCDC82Q8N4S0 544 aa17.6■□□□□ 0.41
HMBOX1-212ENST00000558662 RUNDC3BQ96NL0 473 aa17.6■□□□□ 0.41
HMBOX1-212ENST00000558662 TSG101Q99816 390 aa17.6■□□□□ 0.41
HMBOX1-212ENST00000558662 LRRC27Q9C0I9 530 aa17.6■□□□□ 0.41
HMBOX1-212ENST00000558662 LRMDAQ9H2I8 198 aa17.6■□□□□ 0.41
HMBOX1-212ENST00000558662 DMAP1Q9NPF5 467 aaPredicted RBP17.6■□□□□ 0.41
HMBOX1-212ENST00000558662 PRKAG3Q9UGI9 489 aa17.6■□□□□ 0.41
HMBOX1-212ENST00000558662 RASAL2Q9UJF2 1139 aa17.6■□□□□ 0.41
HMBOX1-212ENST00000558662 BACH1O14867 736 aa17.59■□□□□ 0.41
HMBOX1-212ENST00000558662 GNA14O95837 355 aa17.59■□□□□ 0.41
HMBOX1-212ENST00000558662 SCG2P13521 617 aa17.59■□□□□ 0.41
HMBOX1-212ENST00000558662 RASSF2P50749 326 aa17.59■□□□□ 0.41
HMBOX1-212ENST00000558662 ORC2Q13416 577 aaPredicted RBP17.59■□□□□ 0.41
HMBOX1-212ENST00000558662 SLC39A6Q13433 755 aa17.59■□□□□ 0.41
HMBOX1-212ENST00000558662 PIK3AP1Q6ZUJ8 805 aa17.59■□□□□ 0.41
HMBOX1-212ENST00000558662 SPICE1Q8N0Z3 855 aa17.59■□□□□ 0.41
HMBOX1-212ENST00000558662 LRRC57Q8N9N7 239 aa17.59■□□□□ 0.41
HMBOX1-212ENST00000558662 PIGOQ8TEQ8 1089 aa17.59■□□□□ 0.41
HMBOX1-212ENST00000558662 KIFAP3Q92845 792 aa17.59■□□□□ 0.41
HMBOX1-212ENST00000558662 VCX3BQ9H321 246 aa17.59■□□□□ 0.41
HMBOX1-212ENST00000558662 VCX3AQ9NNX9 186 aa17.59■□□□□ 0.41
HMBOX1-212ENST00000558662 SCOCQ9UIL1 159 aa17.59■□□□□ 0.41
HMBOX1-212ENST00000558662 EPHB6O15197 1021 aa17.58■□□□□ 0.41
HMBOX1-212ENST00000558662 CREB3O43889 395 aa17.58■□□□□ 0.41
HMBOX1-212ENST00000558662 TNKSO95271 1327 aa17.58■□□□□ 0.41
HMBOX1-212ENST00000558662 ZBTB48P10074 688 aaPredicted RBP17.58■□□□□ 0.41
HMBOX1-212ENST00000558662 HSPA6P17066 643 aa17.58■□□□□ 0.41
HMBOX1-212ENST00000558662 POU5F1Q01860 360 aaKnown RBP17.58■□□□□ 0.41
HMBOX1-212ENST00000558662 IFIT5Q13325 482 aaKnown RBP17.58■□□□□ 0.41
HMBOX1-212ENST00000558662 CCDC88AQ3V6T2 1871 aa17.58■□□□□ 0.41
HMBOX1-212ENST00000558662 SPATA31A3Q5VYP0 1347 aa17.58■□□□□ 0.41
HMBOX1-212ENST00000558662 RBBP8NLQ8NC74 664 aaPredicted RBP17.58■□□□□ 0.41
HMBOX1-212ENST00000558662 PRMT1Q99873 361 aaKnown RBP17.58■□□□□ 0.41
HMBOX1-212ENST00000558662 FAM167BQ9BTA0 163 aa17.58■□□□□ 0.41
HMBOX1-212ENST00000558662 TCP11L1Q9NUJ3 509 aa17.58■□□□□ 0.41
HMBOX1-212ENST00000558662 KLHL14Q9P2G3 628 aa17.58■□□□□ 0.41
HMBOX1-212ENST00000558662 PDP2Q9P2J9 529 aa17.58■□□□□ 0.41
HMBOX1-212ENST00000558662 PHF8Q9UPP1 1060 aa17.58■□□□□ 0.41
HMBOX1-212ENST00000558662 LRCH1Q9Y2L9 728 aa17.58■□□□□ 0.41
HMBOX1-212ENST00000558662 CNTNAP5Q8WYK1 1306 aa17.58■□□□□ 0.4
HMBOX1-212ENST00000558662 KDM4FA0A1W2PPD8 638 aa17.58■□□□□ 0.4
HMBOX1-212ENST00000558662 SP100P23497 879 aaPredicted RBP17.58■□□□□ 0.4
HMBOX1-212ENST00000558662 PTENP60484 403 aa17.58■□□□□ 0.4
HMBOX1-212ENST00000558662 ADAM9Q13443 819 aa17.58■□□□□ 0.4
HMBOX1-212ENST00000558662 PFKFB3Q16875 520 aaPredicted RBP17.58■□□□□ 0.4
HMBOX1-212ENST00000558662 DUPD1Q68J44 220 aa17.58■□□□□ 0.4
HMBOX1-212ENST00000558662 ASAP3Q8TDY4 903 aa17.58■□□□□ 0.4
HMBOX1-212ENST00000558662 IFT43Q96FT9 208 aa17.58■□□□□ 0.4
HMBOX1-212ENST00000558662 DCAF5Q96JK2 942 aa17.58■□□□□ 0.4
HMBOX1-212ENST00000558662 USP40Q9NVE5 1235 aa17.58■□□□□ 0.4
HMBOX1-212ENST00000558662 MBD4O95243 580 aa17.57■□□□□ 0.4
HMBOX1-212ENST00000558662 PHKG2P15735 406 aa17.57■□□□□ 0.4
HMBOX1-212ENST00000558662 FLT3P36888 993 aa17.57■□□□□ 0.4
HMBOX1-212ENST00000558662 ASIC1P78348 528 aa17.57■□□□□ 0.4
HMBOX1-212ENST00000558662 METTL24Q5JXM2 366 aa17.57■□□□□ 0.4
HMBOX1-212ENST00000558662 PPP1R15BQ5SWA1 713 aa17.57■□□□□ 0.4
HMBOX1-212ENST00000558662 FAM83BQ5T0W9 1011 aa17.57■□□□□ 0.4
HMBOX1-212ENST00000558662 TRIM74Q86UV6 250 aa17.57■□□□□ 0.4
HMBOX1-212ENST00000558662 TRIM73Q86UV7 250 aa17.57■□□□□ 0.4
HMBOX1-212ENST00000558662 DDX42Q86XP3 938 aaKnown RBP eCLIP17.57■□□□□ 0.4
HMBOX1-212ENST00000558662 DNAJC9Q8WXX5 260 aa17.57■□□□□ 0.4
HMBOX1-212ENST00000558662 ERP44Q9BS26 406 aa17.57■□□□□ 0.4
HMBOX1-212ENST00000558662 ZDHHC18Q9NUE0 388 aa17.57■□□□□ 0.4
HMBOX1-212ENST00000558662 LARSQ9P2J5 1176 aaKnown RBP17.57■□□□□ 0.4
HMBOX1-212ENST00000558662 MTRF1LQ9UGC7 380 aaKnown RBP17.57■□□□□ 0.4
HMBOX1-212ENST00000558662 ATP8A1Q9Y2Q0 1164 aa17.57■□□□□ 0.4
HMBOX1-212ENST00000558662 GFPT2O94808 682 aa17.56■□□□□ 0.4
HMBOX1-212ENST00000558662 TPBGLP0DKB5 382 aa17.56■□□□□ 0.4
HMBOX1-212ENST00000558662 ITGA6P23229 1130 aa17.56■□□□□ 0.4
HMBOX1-212ENST00000558662 KLHL30Q0D2K2 578 aa17.56■□□□□ 0.4
HMBOX1-212ENST00000558662 STK4Q13043 487 aa17.56■□□□□ 0.4
HMBOX1-212ENST00000558662 IFNL2Q8IZJ0 200 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms