RNA–Protein interactions for RNA: ENST00000558635.1

PSMA4-207, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-207ENST00000558635 PPP1R13LQ8WUF5 828 aa11.7□□□□□ -0.54
PSMA4-207ENST00000558635 DDX12PQ92771 950 aa11.7□□□□□ -0.54
PSMA4-207ENST00000558635 FTOQ9C0B1 505 aaKnown RBP eCLIP11.7□□□□□ -0.54
PSMA4-207ENST00000558635 SAMM50Q9Y512 469 aa11.7□□□□□ -0.54
PSMA4-207ENST00000558635 PCDHA10Q9Y5I2 948 aa11.7□□□□□ -0.54
PSMA4-207ENST00000558635 GRIN2DO15399 1336 aa11.69□□□□□ -0.54
PSMA4-207ENST00000558635 IGKV6D-21A0A0A0MT36 114 aa11.69□□□□□ -0.54
PSMA4-207ENST00000558635 A0A0U1RQG5 324 aaPredicted RBP11.69□□□□□ -0.54
PSMA4-207ENST00000558635 H3BRB1 525 aa11.69□□□□□ -0.54
PSMA4-207ENST00000558635 HAS3O00219 553 aa11.69□□□□□ -0.54
PSMA4-207ENST00000558635 LAD1O00515 517 aa11.69□□□□□ -0.54
PSMA4-207ENST00000558635 F2P00734 622 aa11.69□□□□□ -0.54
PSMA4-207ENST00000558635 PSAPP07602 524 aa11.69□□□□□ -0.54
PSMA4-207ENST00000558635 SFNP31947 248 aa11.69□□□□□ -0.54
PSMA4-207ENST00000558635 TECP42680 631 aa11.69□□□□□ -0.54
PSMA4-207ENST00000558635 STAT5BP51692 787 aa11.69□□□□□ -0.54
PSMA4-207ENST00000558635 CEBPZQ03701 1054 aaKnown RBP11.69□□□□□ -0.54
PSMA4-207ENST00000558635 ITGA7Q13683 1181 aa11.69□□□□□ -0.54
PSMA4-207ENST00000558635 KIAA0753Q2KHM9 967 aa11.69□□□□□ -0.54
PSMA4-207ENST00000558635 NCAPH2Q6IBW4 605 aa11.69□□□□□ -0.54
PSMA4-207ENST00000558635 CCDC60Q8IWA6 550 aaPredicted RBP11.69□□□□□ -0.54
PSMA4-207ENST00000558635 RDM1Q8NG50 284 aa11.69□□□□□ -0.54
PSMA4-207ENST00000558635 GLG1Q92896 1179 aa11.69□□□□□ -0.54
PSMA4-207ENST00000558635 ZNF396Q96N95 335 aaPredicted RBP11.69□□□□□ -0.54
PSMA4-207ENST00000558635 USP28Q96RU2 1077 aa11.69□□□□□ -0.54
PSMA4-207ENST00000558635 SMARCAD1Q9H4L7 1026 aa11.69□□□□□ -0.54
PSMA4-207ENST00000558635 TUT1Q9H6E5 874 aaKnown RBP11.69□□□□□ -0.54
PSMA4-207ENST00000558635 AZI2Q9H6S1 392 aa11.69□□□□□ -0.54
PSMA4-207ENST00000558635 TFIP11Q9UBB9 837 aaKnown RBP11.69□□□□□ -0.54
PSMA4-207ENST00000558635 CEP131Q9UPN4 1083 aa11.69□□□□□ -0.54
PSMA4-207ENST00000558635 DOCK5Q9H7D0 1870 aa11.69□□□□□ -0.54
PSMA4-207ENST00000558635 EMSYQ7Z589 1322 aa11.68□□□□□ -0.54
PSMA4-207ENST00000558635 PPP1R3GB7ZBB8 358 aa11.68□□□□□ -0.54
PSMA4-207ENST00000558635 ARVCFO00192 962 aa11.68□□□□□ -0.54
PSMA4-207ENST00000558635 BMP15O95972 392 aa11.68□□□□□ -0.54
PSMA4-207ENST00000558635 MARK3P27448 753 aa11.68□□□□□ -0.54
PSMA4-207ENST00000558635 PRPHP41219 470 aa11.68□□□□□ -0.54
PSMA4-207ENST00000558635 NUCB2P80303 420 aa11.68□□□□□ -0.54
PSMA4-207ENST00000558635 PTPAQ15257 358 aa11.68□□□□□ -0.54
PSMA4-207ENST00000558635 EPHA7Q15375 998 aa11.68□□□□□ -0.54
PSMA4-207ENST00000558635 IL17AQ16552 155 aa11.68□□□□□ -0.54
PSMA4-207ENST00000558635 LRRC26Q2I0M4 334 aa11.68□□□□□ -0.54
PSMA4-207ENST00000558635 TMEM266Q2M3C6 531 aa11.68□□□□□ -0.54
PSMA4-207ENST00000558635 FAM160B1Q5W0V3 765 aa11.68□□□□□ -0.54
PSMA4-207ENST00000558635 DTHD1Q6ZMT9 781 aa11.68□□□□□ -0.54
PSMA4-207ENST00000558635 PLPPR4Q7Z2D5 763 aa11.68□□□□□ -0.54
PSMA4-207ENST00000558635 SLC43A3Q8NBI5 491 aa11.68□□□□□ -0.54
PSMA4-207ENST00000558635 AFAP1L1Q8TED9 768 aa11.68□□□□□ -0.54
PSMA4-207ENST00000558635 IPO9Q96P70 1041 aaKnown RBP11.68□□□□□ -0.54
PSMA4-207ENST00000558635 KATNAL1Q9BW62 490 aa11.68□□□□□ -0.54
PSMA4-207ENST00000558635 RNPEPQ9H4A4 650 aa11.68□□□□□ -0.54
PSMA4-207ENST00000558635 ZNF302Q9NR11 478 aa11.68□□□□□ -0.54
PSMA4-207ENST00000558635 HCSTQ9UBK5 93 aa11.68□□□□□ -0.54
PSMA4-207ENST00000558635 GABBR1Q9UBS5 961 aa11.68□□□□□ -0.54
PSMA4-207ENST00000558635 ZNF215Q9UL58 517 aaPredicted RBP11.68□□□□□ -0.54
PSMA4-207ENST00000558635 ARIH1Q9Y4X5 557 aaPredicted RBP11.68□□□□□ -0.54
PSMA4-207ENST00000558635 BHMG1C9JSJ3 638 aaPredicted RBP11.67□□□□□ -0.54
PSMA4-207ENST00000558635 ATP4AP20648 1035 aa11.67□□□□□ -0.54
PSMA4-207ENST00000558635 NASPP49321 788 aaPredicted RBP11.67□□□□□ -0.54
PSMA4-207ENST00000558635 CDK7P50613 346 aa11.67□□□□□ -0.54
PSMA4-207ENST00000558635 RTP1P59025 263 aa11.67□□□□□ -0.54
PSMA4-207ENST00000558635 PLCB4Q15147 1175 aa11.67□□□□□ -0.54
PSMA4-207ENST00000558635 UGCGQ16739 394 aa11.67□□□□□ -0.54
PSMA4-207ENST00000558635 FAM47CQ5HY64 1035 aa11.67□□□□□ -0.54
PSMA4-207ENST00000558635 ARL6IP4Q66PJ3 421 aaKnown RBP11.67□□□□□ -0.54
PSMA4-207ENST00000558635 PDXDC2PQ6P474 469 aa11.67□□□□□ -0.54
PSMA4-207ENST00000558635 C7orf31Q8N865 590 aa11.67□□□□□ -0.54
PSMA4-207ENST00000558635 BANK1Q8NDB2 785 aa11.67□□□□□ -0.54
PSMA4-207ENST00000558635 KCTD12Q96CX2 325 aaKnown RBP11.67□□□□□ -0.54
PSMA4-207ENST00000558635 DYDC2Q96IM9 177 aa11.67□□□□□ -0.54
PSMA4-207ENST00000558635 ERAP1Q9NZ08 941 aa11.67□□□□□ -0.54
PSMA4-207ENST00000558635 RGL1Q9NZL6 768 aa11.67□□□□□ -0.54
PSMA4-207ENST00000558635 HDAC6Q9UBN7 1215 aa11.67□□□□□ -0.54
PSMA4-207ENST00000558635 MAFBQ9Y5Q3 323 aaPredicted RBP11.67□□□□□ -0.54
PSMA4-207ENST00000558635 MKI67P46013 3256 aaKnown RBP11.66□□□□□ -0.54
PSMA4-207ENST00000558635 DNAH12Q6ZR08 3092 aa11.66□□□□□ -0.54
PSMA4-207ENST00000558635 VWA3AA6NCI4 1184 aa11.66□□□□□ -0.54
PSMA4-207ENST00000558635 ZNF862O60290 1169 aa11.66□□□□□ -0.54
PSMA4-207ENST00000558635 P4HBP07237 508 aaKnown RBP11.66□□□□□ -0.54
PSMA4-207ENST00000558635 SMIM10L2AP0DMW4 78 aa11.66□□□□□ -0.54
PSMA4-207ENST00000558635 SMIM10L2BP0DMW5 78 aa11.66□□□□□ -0.54
PSMA4-207ENST00000558635 COL9A1P20849 921 aa11.66□□□□□ -0.54
PSMA4-207ENST00000558635 MARCKSP29966 332 aaPredicted RBP11.66□□□□□ -0.54
PSMA4-207ENST00000558635 RGS19P49795 217 aa11.66□□□□□ -0.54
PSMA4-207ENST00000558635 SLC26A2P50443 739 aa11.66□□□□□ -0.54
PSMA4-207ENST00000558635 DNM1Q05193 864 aaKnown RBP11.66□□□□□ -0.54
PSMA4-207ENST00000558635 PDIA5Q14554 519 aa11.66□□□□□ -0.54
PSMA4-207ENST00000558635 SNX17Q15036 470 aa11.66□□□□□ -0.54
PSMA4-207ENST00000558635 SLC39A14Q15043 492 aa11.66□□□□□ -0.54
PSMA4-207ENST00000558635 TRIM60Q495X7 471 aa11.66□□□□□ -0.54
PSMA4-207ENST00000558635 C6orf132Q5T0Z8 1188 aa11.66□□□□□ -0.54
PSMA4-207ENST00000558635 C1orf53Q5VUE5 145 aa11.66□□□□□ -0.54
PSMA4-207ENST00000558635 ATL3Q6DD88 541 aa11.66□□□□□ -0.54
PSMA4-207ENST00000558635 NFRKBQ6P4R8 1299 aa11.66□□□□□ -0.54
PSMA4-207ENST00000558635 TRMT1LQ7Z2T5 733 aaKnown RBP11.66□□□□□ -0.54
PSMA4-207ENST00000558635 CKAP2LQ8IYA6 745 aa11.66□□□□□ -0.54
PSMA4-207ENST00000558635 IGSF22Q8N9C0 903 aa11.66□□□□□ -0.54
PSMA4-207ENST00000558635 LINC00301Q8NCQ3 95 aa11.66□□□□□ -0.54
PSMA4-207ENST00000558635 CHAMP1Q96JM3 812 aa11.66□□□□□ -0.54
PSMA4-207ENST00000558635 EIF2AK1Q9BQI3 630 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms