RNA–Protein interactions for RNA: ENST00000558609.1

CSHL1-208, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 3

Gene CSHL1, Length 1,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-208ENST00000558609 ZNF302Q9NR11 478 aa17.57■□□□□ 0.4
CSHL1-208ENST00000558609 GTF3C3Q9Y5Q9 886 aa17.57■□□□□ 0.4
CSHL1-208ENST00000558609 MICAL3Q7RTP6 2002 aa17.57■□□□□ 0.4
CSHL1-208ENST00000558609 STK36Q9NRP7 1315 aa17.56■□□□□ 0.4
CSHL1-208ENST00000558609 MSH4O15457 936 aa17.56■□□□□ 0.4
CSHL1-208ENST00000558609 IGFBP4P22692 258 aa17.56■□□□□ 0.4
CSHL1-208ENST00000558609 PDXDC2PQ6P474 469 aa17.56■□□□□ 0.4
CSHL1-208ENST00000558609 TBCKQ8TEA7 893 aa17.56■□□□□ 0.4
CSHL1-208ENST00000558609 ATP8B4Q8TF62 1192 aa17.56■□□□□ 0.4
CSHL1-208ENST00000558609 ZBTB10Q96DT7 871 aa17.56■□□□□ 0.4
CSHL1-208ENST00000558609 IFIH1Q9BYX4 1025 aaKnown RBP17.56■□□□□ 0.4
CSHL1-208ENST00000558609 PCDHA10Q9Y5I2 948 aa17.56■□□□□ 0.4
CSHL1-208ENST00000558609 MAFBQ9Y5Q3 323 aaPredicted RBP17.56■□□□□ 0.4
CSHL1-208ENST00000558609 CYP3A7-CYP3A51PA0A087WV96 503 aa17.55■□□□□ 0.4
CSHL1-208ENST00000558609 SMIM35A0A1B0GVV1 85 aa17.55■□□□□ 0.4
CSHL1-208ENST00000558609 LCHNA4D1U4 455 aa17.55■□□□□ 0.4
CSHL1-208ENST00000558609 CTDNEP1O95476 244 aa17.55■□□□□ 0.4
CSHL1-208ENST00000558609 SEC24BO95487 1268 aa17.55■□□□□ 0.4
CSHL1-208ENST00000558609 PSAPP07602 524 aa17.55■□□□□ 0.4
CSHL1-208ENST00000558609 POU3F3P20264 500 aaPredicted RBP17.55■□□□□ 0.4
CSHL1-208ENST00000558609 ATP4AP20648 1035 aa17.55■□□□□ 0.4
CSHL1-208ENST00000558609 CYP3A7P24462 503 aa17.55■□□□□ 0.4
CSHL1-208ENST00000558609 MRPS6P82932 125 aaKnown RBP17.55■□□□□ 0.4
CSHL1-208ENST00000558609 LPIN1Q14693 890 aa17.55■□□□□ 0.4
CSHL1-208ENST00000558609 Q4G0T1 1027 aa17.55■□□□□ 0.4
CSHL1-208ENST00000558609 IER5Q5VY09 327 aa17.55■□□□□ 0.4
CSHL1-208ENST00000558609 MTHFD1LQ6UB35 978 aa17.55■□□□□ 0.4
CSHL1-208ENST00000558609 NME8Q8N427 588 aa17.55■□□□□ 0.4
CSHL1-208ENST00000558609 TRAPPC12Q8WVT3 735 aa17.55■□□□□ 0.4
CSHL1-208ENST00000558609 PPM1EQ8WY54 764 aa17.55■□□□□ 0.4
CSHL1-208ENST00000558609 RIT2Q99578 217 aa17.55■□□□□ 0.4
CSHL1-208ENST00000558609 PHF20Q9BVI0 1012 aa17.55■□□□□ 0.4
CSHL1-208ENST00000558609 CERS4Q9HA82 394 aa17.55■□□□□ 0.4
CSHL1-208ENST00000558609 TCEAL9Q9UHQ7 104 aa17.55■□□□□ 0.4
CSHL1-208ENST00000558609 INSL6Q9Y581 213 aa17.55■□□□□ 0.4
CSHL1-208ENST00000558609 CDY2AQ9Y6F7 541 aa17.55■□□□□ 0.4
CSHL1-208ENST00000558609 TRANK1O15050 2925 aa17.55■□□□□ 0.4
CSHL1-208ENST00000558609 COL1A2P08123 1366 aa17.54■□□□□ 0.4
CSHL1-208ENST00000558609 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.54■□□□□ 0.4
CSHL1-208ENST00000558609 GHRP10912 638 aa17.54■□□□□ 0.4
CSHL1-208ENST00000558609 KLRC1P26715 233 aa17.54■□□□□ 0.4
CSHL1-208ENST00000558609 HTRA4P83105 476 aaPredicted RBP17.54■□□□□ 0.4
CSHL1-208ENST00000558609 ZNF484Q5JVG2 852 aa17.54■□□□□ 0.4
CSHL1-208ENST00000558609 FBXO47Q5MNV8 452 aa17.54■□□□□ 0.4
CSHL1-208ENST00000558609 FAM117BQ6P1L5 589 aa17.54■□□□□ 0.4
CSHL1-208ENST00000558609 MOXD1Q6UVY6 613 aa17.54■□□□□ 0.4
CSHL1-208ENST00000558609 MYOCDQ8IZQ8 938 aa17.54■□□□□ 0.4
CSHL1-208ENST00000558609 ARNTL2Q8WYA1 636 aa17.54■□□□□ 0.4
CSHL1-208ENST00000558609 SLC5A5Q92911 643 aa17.54■□□□□ 0.4
CSHL1-208ENST00000558609 TOP1MTQ969P6 601 aa17.54■□□□□ 0.4
CSHL1-208ENST00000558609 MBOAT7Q96N66 472 aa17.54■□□□□ 0.4
CSHL1-208ENST00000558609 FAM49AQ9H0Q0 323 aaPredicted RBP17.54■□□□□ 0.4
CSHL1-208ENST00000558609 KCNJ14Q9UNX9 436 aa17.54■□□□□ 0.4
CSHL1-208ENST00000558609 SQORQ9Y6N5 450 aa17.54■□□□□ 0.4
CSHL1-208ENST00000558609 EPOPA6NHQ4 379 aa17.53■□□□□ 0.4
CSHL1-208ENST00000558609 WDR64B1ANS9 1081 aa17.53■□□□□ 0.4
CSHL1-208ENST00000558609 ZBTB42B2RXF5 422 aa17.53■□□□□ 0.4
CSHL1-208ENST00000558609 RFXAPO00287 272 aa17.53■□□□□ 0.4
CSHL1-208ENST00000558609 XBP1P17861 261 aa17.53■□□□□ 0.4
CSHL1-208ENST00000558609 NEK4P51957 841 aa17.53■□□□□ 0.4
CSHL1-208ENST00000558609 NONOQ15233 471 aaKnown RBP eCLIP17.53■□□□□ 0.4
CSHL1-208ENST00000558609 ME3Q16798 604 aa17.53■□□□□ 0.4
CSHL1-208ENST00000558609 TSHZ1Q6ZSZ6 1077 aa17.53■□□□□ 0.4
CSHL1-208ENST00000558609 KRT25Q7Z3Z0 450 aa17.53■□□□□ 0.4
CSHL1-208ENST00000558609 BBXQ8WY36 941 aaPredicted RBP17.53■□□□□ 0.4
CSHL1-208ENST00000558609 KDM3AQ9Y4C1 1321 aa17.52■□□□□ 0.4
CSHL1-208ENST00000558609 SIP14410 1827 aa17.52■□□□□ 0.4
CSHL1-208ENST00000558609 MYH9P35579 1960 aaKnown RBP17.52■□□□□ 0.4
CSHL1-208ENST00000558609 LINC01553A4QN01 128 aa17.52■□□□□ 0.4
CSHL1-208ENST00000558609 GAS7O60861 476 aa17.52■□□□□ 0.4
CSHL1-208ENST00000558609 TDP2O95551 362 aa17.52■□□□□ 0.4
CSHL1-208ENST00000558609 ERVK-21P61565 698 aa17.52■□□□□ 0.4
CSHL1-208ENST00000558609 LRCH2Q5VUJ6 765 aa17.52■□□□□ 0.4
CSHL1-208ENST00000558609 SPRED2Q7Z698 418 aa17.52■□□□□ 0.4
CSHL1-208ENST00000558609 CKAP2LQ8IYA6 745 aa17.52■□□□□ 0.4
CSHL1-208ENST00000558609 SP7Q8TDD2 431 aaPredicted RBP17.52■□□□□ 0.4
CSHL1-208ENST00000558609 ATXN2LQ8WWM7 1075 aaKnown RBP17.52■□□□□ 0.4
CSHL1-208ENST00000558609 WASF1Q92558 559 aa17.52■□□□□ 0.4
CSHL1-208ENST00000558609 ASB2Q96Q27 587 aa17.52■□□□□ 0.4
CSHL1-208ENST00000558609 CELF4Q9BZC1 486 aaKnown RBP17.52■□□□□ 0.4
CSHL1-208ENST00000558609 DISC1Q9NRI5 854 aa17.52■□□□□ 0.4
CSHL1-208ENST00000558609 ORC3Q9UBD5 711 aaPredicted RBP17.52■□□□□ 0.4
CSHL1-208ENST00000558609 GABBR1Q9UBS5 961 aa17.52■□□□□ 0.4
CSHL1-208ENST00000558609 SAMM50Q9Y512 469 aa17.52■□□□□ 0.4
CSHL1-208ENST00000558609 TRPV2Q9Y5S1 764 aa17.52■□□□□ 0.4
CSHL1-208ENST00000558609 IGSF9BQ9UPX0 1349 aa17.51■□□□□ 0.39
CSHL1-208ENST00000558609 M0QZ92 97 aa17.51■□□□□ 0.39
CSHL1-208ENST00000558609 PSMD10O75832 226 aa17.51■□□□□ 0.39
CSHL1-208ENST00000558609 LARGE1O95461 756 aa17.51■□□□□ 0.39
CSHL1-208ENST00000558609 FDPSP14324 419 aaKnown RBP17.51■□□□□ 0.39
CSHL1-208ENST00000558609 SFNP31947 248 aa17.51■□□□□ 0.39
CSHL1-208ENST00000558609 JAK3P52333 1124 aa17.51■□□□□ 0.39
CSHL1-208ENST00000558609 INF2Q27J81 1249 aa17.51■□□□□ 0.39
CSHL1-208ENST00000558609 KIAA0319LQ8IZA0 1049 aa17.51■□□□□ 0.39
CSHL1-208ENST00000558609 NECAB1Q8N987 351 aa17.51■□□□□ 0.39
CSHL1-208ENST00000558609 GTF3C6Q969F1 213 aa17.51■□□□□ 0.39
CSHL1-208ENST00000558609 TGS1Q96RS0 853 aaKnown RBP17.51■□□□□ 0.39
CSHL1-208ENST00000558609 TEKT3Q9BXF9 490 aa17.51■□□□□ 0.39
CSHL1-208ENST00000558609 AGO3Q9H9G7 860 aaKnown RBP17.51■□□□□ 0.39
CSHL1-208ENST00000558609 MTCH2Q9Y6C9 303 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms