RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 PPP4R3CPQ6ZMV5 832 aa12.61□□□□□ -0.39
CSPG4P12-201ENST00000558282 LARP4BQ92615 738 aaKnown RBP12.61□□□□□ -0.39
CSPG4P12-201ENST00000558282 PAGE5Q96GU1 130 aa12.61□□□□□ -0.39
CSPG4P12-201ENST00000558282 NT5C1BQ96P26 610 aa12.61□□□□□ -0.39
CSPG4P12-201ENST00000558282 OLFML3Q9NRN5 406 aa12.61□□□□□ -0.39
CSPG4P12-201ENST00000558282 SYBUQ9NX95 663 aa12.61□□□□□ -0.39
CSPG4P12-201ENST00000558282 BLOC1S6Q9UL45 172 aa12.61□□□□□ -0.39
CSPG4P12-201ENST00000558282 PCDHA12Q9UN75 941 aa12.61□□□□□ -0.39
CSPG4P12-201ENST00000558282 CARSP49589 748 aaKnown RBP12.61□□□□□ -0.39
CSPG4P12-201ENST00000558282 ITIH4Q14624 930 aa12.61□□□□□ -0.39
CSPG4P12-201ENST00000558282 STAT4Q14765 748 aa12.61□□□□□ -0.39
CSPG4P12-201ENST00000558282 SLC17A8Q8NDX2 589 aa12.61□□□□□ -0.39
CSPG4P12-201ENST00000558282 PLBD2Q8NHP8 589 aa12.61□□□□□ -0.39
CSPG4P12-201ENST00000558282 PPCSQ9HAB8 311 aa12.61□□□□□ -0.39
CSPG4P12-201ENST00000558282 CEP72Q9P209 647 aa12.61□□□□□ -0.39
CSPG4P12-201ENST00000558282 LCMT1Q9UIC8 334 aa12.61□□□□□ -0.39
CSPG4P12-201ENST00000558282 CHMP2BQ9UQN3 213 aa12.61□□□□□ -0.39
CSPG4P12-201ENST00000558282 A0A1W2PQC6 194 aa12.61□□□□□ -0.39
CSPG4P12-201ENST00000558282 TCP11X1B4DZS4 312 aa12.61□□□□□ -0.39
CSPG4P12-201ENST00000558282 IRS4O14654 1257 aaPredicted RBP12.61□□□□□ -0.39
CSPG4P12-201ENST00000558282 COPS2P61201 443 aa12.61□□□□□ -0.39
CSPG4P12-201ENST00000558282 BASP1P80723 227 aaKnown RBP12.61□□□□□ -0.39
CSPG4P12-201ENST00000558282 FMR1NBQ8N0W7 255 aaPredicted RBP12.61□□□□□ -0.39
CSPG4P12-201ENST00000558282 SIKE1Q9BRV8 207 aa12.61□□□□□ -0.39
CSPG4P12-201ENST00000558282 FUT8Q9BYC5 575 aa12.61□□□□□ -0.39
CSPG4P12-201ENST00000558282 DCTN4Q9UJW0 460 aa12.61□□□□□ -0.39
CSPG4P12-201ENST00000558282 SNX12Q9UMY4 172 aa12.61□□□□□ -0.39
CSPG4P12-201ENST00000558282 YY1P25490 414 aa12.61□□□□□ -0.39
CSPG4P12-201ENST00000558282 MAP3K10Q02779 954 aa12.61□□□□□ -0.39
CSPG4P12-201ENST00000558282 SMYD4Q8IYR2 804 aaPredicted RBP12.61□□□□□ -0.39
CSPG4P12-201ENST00000558282 TERB1Q8NA31 727 aa12.61□□□□□ -0.39
CSPG4P12-201ENST00000558282 ATP6V0A1Q93050 837 aa12.61□□□□□ -0.39
CSPG4P12-201ENST00000558282 CNBD2Q96M20 576 aa12.61□□□□□ -0.39
CSPG4P12-201ENST00000558282 KCNK16Q96T55 309 aa12.61□□□□□ -0.39
CSPG4P12-201ENST00000558282 SAYSD1Q9NPB0 183 aa12.61□□□□□ -0.39
CSPG4P12-201ENST00000558282 PARP3Q9Y6F1 533 aa12.61□□□□□ -0.39
CSPG4P12-201ENST00000558282 ZNF521Q96K83 1311 aa12.6□□□□□ -0.39
CSPG4P12-201ENST00000558282 CYP2E1P05181 493 aaPredicted RBP12.6□□□□□ -0.39
CSPG4P12-201ENST00000558282 SRGAP2BP0DMP2 458 aa12.6□□□□□ -0.39
CSPG4P12-201ENST00000558282 GAP43P17677 238 aa12.6□□□□□ -0.39
CSPG4P12-201ENST00000558282 CASP2P42575 452 aa12.6□□□□□ -0.39
CSPG4P12-201ENST00000558282 PPM1FP49593 454 aaPredicted RBP12.6□□□□□ -0.39
CSPG4P12-201ENST00000558282 GABPAQ06546 454 aa12.6□□□□□ -0.39
CSPG4P12-201ENST00000558282 MAPRE2Q15555 327 aa12.6□□□□□ -0.39
CSPG4P12-201ENST00000558282 BBS9Q3SYG4 887 aa12.6□□□□□ -0.39
CSPG4P12-201ENST00000558282 RFX6Q8HWS3 928 aa12.6□□□□□ -0.39
CSPG4P12-201ENST00000558282 FAM178BQ8IXR5 827 aa12.6□□□□□ -0.39
CSPG4P12-201ENST00000558282 NAF1Q96HR8 494 aaKnown RBP12.6□□□□□ -0.39
CSPG4P12-201ENST00000558282 SUCLG2Q96I99 432 aa12.6□□□□□ -0.39
CSPG4P12-201ENST00000558282 MTRQ99707 1265 aa12.6□□□□□ -0.39
CSPG4P12-201ENST00000558282 PRPSAP1Q14558 356 aa12.6□□□□□ -0.39
CSPG4P12-201ENST00000558282 ADCK1Q86TW2 530 aa12.6□□□□□ -0.39
CSPG4P12-201ENST00000558282 ZSCAN10Q96SZ4 725 aaPredicted RBP12.6□□□□□ -0.39
CSPG4P12-201ENST00000558282 EDEM3Q9BZQ6 932 aa12.6□□□□□ -0.39
CSPG4P12-201ENST00000558282 AP4S1Q9Y587 144 aa12.6□□□□□ -0.39
CSPG4P12-201ENST00000558282 ZNF532Q9HCE3 1301 aa12.6□□□□□ -0.39
CSPG4P12-201ENST00000558282 IGF2BP3O00425 579 aaKnown RBP eCLIP12.6□□□□□ -0.39
CSPG4P12-201ENST00000558282 CHN1P15882 459 aa12.6□□□□□ -0.39
CSPG4P12-201ENST00000558282 CYTH1Q15438 398 aa12.6□□□□□ -0.39
CSPG4P12-201ENST00000558282 RDH13Q8NBN7 331 aa12.6□□□□□ -0.39
CSPG4P12-201ENST00000558282 DACH2Q96NX9 599 aa12.6□□□□□ -0.39
CSPG4P12-201ENST00000558282 SNX25Q9H3E2 840 aa12.6□□□□□ -0.39
CSPG4P12-201ENST00000558282 GPCPD1Q9NPB8 672 aa12.6□□□□□ -0.39
CSPG4P12-201ENST00000558282 ADAMTS1Q9UHI8 967 aa12.6□□□□□ -0.39
CSPG4P12-201ENST00000558282 IL10P22301 178 aa12.6□□□□□ -0.39
CSPG4P12-201ENST00000558282 S100A5P33763 92 aa12.6□□□□□ -0.39
CSPG4P12-201ENST00000558282 DAB2P98082 770 aa12.6□□□□□ -0.39
CSPG4P12-201ENST00000558282 SFSWAPQ12872 951 aaKnown RBP12.6□□□□□ -0.39
CSPG4P12-201ENST00000558282 MORF4L2Q15014 288 aa12.6□□□□□ -0.39
CSPG4P12-201ENST00000558282 CDC37Q16543 378 aaPredicted RBP12.6□□□□□ -0.39
CSPG4P12-201ENST00000558282 TRIM63Q969Q1 353 aa12.6□□□□□ -0.39
CSPG4P12-201ENST00000558282 NLRP3Q96P20 1036 aa12.6□□□□□ -0.39
CSPG4P12-201ENST00000558282 RANBP17Q9H2T7 1088 aaKnown RBP12.6□□□□□ -0.39
CSPG4P12-201ENST00000558282 KDM4CQ9H3R0 1056 aa12.6□□□□□ -0.39
CSPG4P12-201ENST00000558282 MMP1P03956 469 aa12.59□□□□□ -0.39
CSPG4P12-201ENST00000558282 FAM200BP0CF97 657 aa12.59□□□□□ -0.39
CSPG4P12-201ENST00000558282 NQO1P15559 274 aaKnown RBP12.59□□□□□ -0.39
CSPG4P12-201ENST00000558282 PPARAQ07869 468 aa12.59□□□□□ -0.39
CSPG4P12-201ENST00000558282 SWT1Q5T5J6 900 aaKnown RBP12.59□□□□□ -0.39
CSPG4P12-201ENST00000558282 ARL6IP4Q66PJ3 421 aaKnown RBP12.59□□□□□ -0.39
CSPG4P12-201ENST00000558282 PGBD1Q96JS3 809 aa12.59□□□□□ -0.39
CSPG4P12-201ENST00000558282 PLXNC1O60486 1568 aa12.59□□□□□ -0.39
CSPG4P12-201ENST00000558282 TNNC2P02585 160 aa12.59□□□□□ -0.39
CSPG4P12-201ENST00000558282 KRT1P04264 644 aa12.59□□□□□ -0.39
CSPG4P12-201ENST00000558282 OCRLQ01968 901 aa12.59□□□□□ -0.39
CSPG4P12-201ENST00000558282 WDR93Q6P2C0 686 aa12.59□□□□□ -0.39
CSPG4P12-201ENST00000558282 NFRKBQ6P4R8 1299 aa12.59□□□□□ -0.39
CSPG4P12-201ENST00000558282 RASGRP2Q7LDG7 609 aa12.59□□□□□ -0.39
CSPG4P12-201ENST00000558282 LPIN2Q92539 896 aa12.59□□□□□ -0.39
CSPG4P12-201ENST00000558282 CMTM5Q96DZ9 223 aa12.59□□□□□ -0.39
CSPG4P12-201ENST00000558282 PRMT1Q99873 361 aaKnown RBP12.59□□□□□ -0.39
CSPG4P12-201ENST00000558282 GINM1Q9NU53 330 aa12.59□□□□□ -0.39
CSPG4P12-201ENST00000558282 MRGBPQ9NV56 204 aa12.59□□□□□ -0.39
CSPG4P12-201ENST00000558282 STMN3Q9NZ72 180 aa12.59□□□□□ -0.39
CSPG4P12-201ENST00000558282 L3MBTL1Q9Y468 752 aa12.59□□□□□ -0.39
CSPG4P12-201ENST00000558282 UBN2Q6ZU65 1347 aa12.59□□□□□ -0.39
CSPG4P12-201ENST00000558282 PHF20L1A8MW92 1017 aa12.59□□□□□ -0.39
CSPG4P12-201ENST00000558282 ATP1A1P05023 1023 aaKnown RBP12.59□□□□□ -0.39
CSPG4P12-201ENST00000558282 GHRP10912 638 aa12.59□□□□□ -0.39
CSPG4P12-201ENST00000558282 PICALMQ13492 652 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms