RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 TRAPPC12Q8WVT3 735 aa10.1□□□□□ -0.79
SPG11-207ENST00000558138 BBXQ8WY36 941 aaPredicted RBP10.1□□□□□ -0.79
SPG11-207ENST00000558138 DHX38Q92620 1227 aaKnown RBP10.1□□□□□ -0.79
SPG11-207ENST00000558138 MBOAT7Q96N66 472 aa10.1□□□□□ -0.79
SPG11-207ENST00000558138 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.1□□□□□ -0.79
SPG11-207ENST00000558138 PCDHA12Q9UN75 941 aa10.1□□□□□ -0.79
SPG11-207ENST00000558138 TANC1Q9C0D5 1861 aa10.09□□□□□ -0.79
SPG11-207ENST00000558138 MYH9P35579 1960 aaKnown RBP10.09□□□□□ -0.79
SPG11-207ENST00000558138 TRIP12Q14669 1992 aaPredicted RBP10.09□□□□□ -0.79
SPG11-207ENST00000558138 DDX11L8A8MPP1 907 aa10.09□□□□□ -0.79
SPG11-207ENST00000558138 KIF28PB7ZC32 967 aa10.09□□□□□ -0.79
SPG11-207ENST00000558138 EDIL3O43854 480 aa10.09□□□□□ -0.79
SPG11-207ENST00000558138 OATP04181 439 aa10.09□□□□□ -0.79
SPG11-207ENST00000558138 OR52Z1P0C646 297 aa10.09□□□□□ -0.79
SPG11-207ENST00000558138 KLRC1P26715 233 aa10.09□□□□□ -0.79
SPG11-207ENST00000558138 KCNJ6P48051 423 aa10.09□□□□□ -0.79
SPG11-207ENST00000558138 EPHB4P54760 987 aa10.09□□□□□ -0.79
SPG11-207ENST00000558138 PSMC5P62195 406 aa10.09□□□□□ -0.79
SPG11-207ENST00000558138 HIC1Q14526 733 aa10.09□□□□□ -0.79
SPG11-207ENST00000558138 UGCGQ16739 394 aa10.09□□□□□ -0.79
SPG11-207ENST00000558138 MTERF2Q49AM1 385 aa10.09□□□□□ -0.79
SPG11-207ENST00000558138 RUFY4Q6ZNE9 571 aa10.09□□□□□ -0.79
SPG11-207ENST00000558138 SPRYD3Q8NCJ5 442 aa10.09□□□□□ -0.79
SPG11-207ENST00000558138 DNAJB3Q8WWF6 145 aa10.09□□□□□ -0.79
SPG11-207ENST00000558138 ZBTB10Q96DT7 871 aa10.09□□□□□ -0.79
SPG11-207ENST00000558138 SCLT1Q96NL6 688 aa10.09□□□□□ -0.79
SPG11-207ENST00000558138 TTC12Q9H892 705 aaPredicted RBP10.09□□□□□ -0.79
SPG11-207ENST00000558138 KCNMB3Q9NPA1 279 aa10.09□□□□□ -0.79
SPG11-207ENST00000558138 GINS2Q9Y248 185 aa10.09□□□□□ -0.79
SPG11-207ENST00000558138 IGSF9BQ9UPX0 1349 aa10.08□□□□□ -0.8
SPG11-207ENST00000558138 IGKV6D-21A0A0A0MT36 114 aa10.08□□□□□ -0.8
SPG11-207ENST00000558138 CAND2O75155 1236 aa10.08□□□□□ -0.8
SPG11-207ENST00000558138 RPLP2P05387 115 aaKnown RBP10.08□□□□□ -0.8
SPG11-207ENST00000558138 TMOD1P28289 359 aa10.08□□□□□ -0.8
SPG11-207ENST00000558138 QARSP47897 775 aaKnown RBP10.08□□□□□ -0.8
SPG11-207ENST00000558138 TRAPPC10P48553 1259 aa10.08□□□□□ -0.8
SPG11-207ENST00000558138 CYP4A11Q02928 519 aa10.08□□□□□ -0.8
SPG11-207ENST00000558138 TBC1D8BQ0IIM8 1120 aa10.08□□□□□ -0.8
SPG11-207ENST00000558138 TMEM62Q0P6H9 643 aa10.08□□□□□ -0.8
SPG11-207ENST00000558138 PPP2R5CQ13362 524 aa10.08□□□□□ -0.8
SPG11-207ENST00000558138 ORC2Q13416 577 aaPredicted RBP10.08□□□□□ -0.8
SPG11-207ENST00000558138 CUL4AQ13619 759 aa10.08□□□□□ -0.8
SPG11-207ENST00000558138 NBR1Q14596 966 aa10.08□□□□□ -0.8
SPG11-207ENST00000558138 TMEM240Q5SV17 173 aa10.08□□□□□ -0.8
SPG11-207ENST00000558138 IER5Q5VY09 327 aa10.08□□□□□ -0.8
SPG11-207ENST00000558138 MTHFD1LQ6UB35 978 aa10.08□□□□□ -0.8
SPG11-207ENST00000558138 TPH2Q8IWU9 490 aa10.08□□□□□ -0.8
SPG11-207ENST00000558138 ERMNQ8TAM6 284 aa10.08□□□□□ -0.8
SPG11-207ENST00000558138 HAS1Q92839 578 aa10.08□□□□□ -0.8
SPG11-207ENST00000558138 WNT8BQ93098 351 aa10.08□□□□□ -0.8
SPG11-207ENST00000558138 MAP7D2Q96T17 732 aa10.08□□□□□ -0.8
SPG11-207ENST00000558138 PPP1R16BQ96T49 567 aa10.08□□□□□ -0.8
SPG11-207ENST00000558138 RAB34Q9BZG1 259 aa10.08□□□□□ -0.8
SPG11-207ENST00000558138 PRO3102Q9H379 93 aa10.08□□□□□ -0.8
SPG11-207ENST00000558138 SUGCTQ9HAC7 445 aa10.08□□□□□ -0.8
SPG11-207ENST00000558138 AKT3Q9Y243 479 aa10.08□□□□□ -0.8
SPG11-207ENST00000558138 MAFBQ9Y5Q3 323 aaPredicted RBP10.08□□□□□ -0.8
SPG11-207ENST00000558138 SLC4A7Q9Y6M7 1214 aa10.08□□□□□ -0.8
SPG11-207ENST00000558138 COL1A2P08123 1366 aa10.08□□□□□ -0.8
SPG11-207ENST00000558138 EML1O00423 815 aa10.07□□□□□ -0.8
SPG11-207ENST00000558138 P4HBP07237 508 aaKnown RBP10.07□□□□□ -0.8
SPG11-207ENST00000558138 GHRP10912 638 aa10.07□□□□□ -0.8
SPG11-207ENST00000558138 IBSPP21815 317 aaPredicted RBP10.07□□□□□ -0.8
SPG11-207ENST00000558138 U2AF2P26368 475 aaKnown RBP eCLIP10.07□□□□□ -0.8
SPG11-207ENST00000558138 TECP42680 631 aa10.07□□□□□ -0.8
SPG11-207ENST00000558138 MRPS6P82932 125 aaKnown RBP10.07□□□□□ -0.8
SPG11-207ENST00000558138 CTTNQ14247 550 aaKnown RBP10.07□□□□□ -0.8
SPG11-207ENST00000558138 EPHA7Q15375 998 aa10.07□□□□□ -0.8
SPG11-207ENST00000558138 RILPL1Q5EBL4 403 aa10.07□□□□□ -0.8
SPG11-207ENST00000558138 XKR3Q5GH77 459 aa10.07□□□□□ -0.8
SPG11-207ENST00000558138 FERMT3Q86UX7 667 aa10.07□□□□□ -0.8
SPG11-207ENST00000558138 SNX21Q969T3 373 aa10.07□□□□□ -0.8
SPG11-207ENST00000558138 INTS4Q96HW7 963 aaKnown RBP10.07□□□□□ -0.8
SPG11-207ENST00000558138 DYDC2Q96IM9 177 aa10.07□□□□□ -0.8
SPG11-207ENST00000558138 CTAGE1Q96RT6 745 aa10.07□□□□□ -0.8
SPG11-207ENST00000558138 SH2D3AQ9BRG2 576 aa10.07□□□□□ -0.8
SPG11-207ENST00000558138 LXNQ9BS40 222 aa10.07□□□□□ -0.8
SPG11-207ENST00000558138 VAV3Q9UKW4 847 aa10.07□□□□□ -0.8
SPG11-207ENST00000558138 PCDHA2Q9Y5H9 948 aa10.07□□□□□ -0.8
SPG11-207ENST00000558138 TRPV2Q9Y5S1 764 aa10.07□□□□□ -0.8
SPG11-207ENST00000558138 CDY2AQ9Y6F7 541 aa10.07□□□□□ -0.8
SPG11-207ENST00000558138 SCN5AQ14524 2016 aa10.07□□□□□ -0.8
SPG11-207ENST00000558138 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.06□□□□□ -0.8
SPG11-207ENST00000558138 SMIM35A0A1B0GVV1 85 aa10.06□□□□□ -0.8
SPG11-207ENST00000558138 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.06□□□□□ -0.8
SPG11-207ENST00000558138 MBLAC1A4D2B0 266 aaPredicted RBP10.06□□□□□ -0.8
SPG11-207ENST00000558138 POTEMA6NI47 508 aa10.06□□□□□ -0.8
SPG11-207ENST00000558138 WNT7AO00755 349 aa10.06□□□□□ -0.8
SPG11-207ENST00000558138 MAGEB2O15479 319 aa10.06□□□□□ -0.8
SPG11-207ENST00000558138 ATP4AP20648 1035 aa10.06□□□□□ -0.8
SPG11-207ENST00000558138 HOXC8P31273 242 aa10.06□□□□□ -0.8
SPG11-207ENST00000558138 DNM2P50570 870 aa10.06□□□□□ -0.8
SPG11-207ENST00000558138 POLGP54098 1239 aaPredicted RBP10.06□□□□□ -0.8
SPG11-207ENST00000558138 RBL2Q08999 1139 aa10.06□□□□□ -0.8
SPG11-207ENST00000558138 IKBKEQ14164 716 aa10.06□□□□□ -0.8
SPG11-207ENST00000558138 TRIM71Q2Q1W2 868 aaKnown RBP10.06□□□□□ -0.8
SPG11-207ENST00000558138 LRIT3Q3SXY7 679 aa10.06□□□□□ -0.8
SPG11-207ENST00000558138 XKR9Q5GH70 373 aa10.06□□□□□ -0.8
SPG11-207ENST00000558138 HAUS3Q68CZ6 603 aa10.06□□□□□ -0.8
SPG11-207ENST00000558138 PLA2G4FQ68DD2 849 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms