RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 PLPPR4Q7Z2D5 763 aa9.98□□□□□ -0.81
SNRPA1-206ENST00000558059 RPAINQ86UA6 219 aa9.98□□□□□ -0.81
SNRPA1-206ENST00000558059 HERC6Q8IVU3 1022 aa9.98□□□□□ -0.81
SNRPA1-206ENST00000558059 FAM177A1Q8N128 213 aaPredicted RBP9.98□□□□□ -0.81
SNRPA1-206ENST00000558059 LENG9Q96B70 501 aa9.98□□□□□ -0.81
SNRPA1-206ENST00000558059 SLC9A7Q96T83 725 aa9.98□□□□□ -0.81
SNRPA1-206ENST00000558059 SLKQ9H2G2 1235 aaPredicted RBP9.98□□□□□ -0.81
SNRPA1-206ENST00000558059 PCDHA4Q9UN74 947 aa9.98□□□□□ -0.81
SNRPA1-206ENST00000558059 SIP14410 1827 aa9.98□□□□□ -0.81
SNRPA1-206ENST00000558059 ABHD14A-ACY1A0A1B0GW23 586 aa9.97□□□□□ -0.81
SNRPA1-206ENST00000558059 DDX39AO00148 427 aaKnown RBP9.97□□□□□ -0.81
SNRPA1-206ENST00000558059 EIF5BO60841 1220 aaKnown RBP9.97□□□□□ -0.81
SNRPA1-206ENST00000558059 CTSHP09668 335 aa9.97□□□□□ -0.81
SNRPA1-206ENST00000558059 FOSL2P15408 326 aa9.97□□□□□ -0.81
SNRPA1-206ENST00000558059 STAT5BP51692 787 aa9.97□□□□□ -0.81
SNRPA1-206ENST00000558059 USP11P51784 963 aa9.97□□□□□ -0.81
SNRPA1-206ENST00000558059 DEFB103AP81534 67 aa9.97□□□□□ -0.81
SNRPA1-206ENST00000558059 SETQ01105 290 aaPredicted RBP9.97□□□□□ -0.81
SNRPA1-206ENST00000558059 PLCB4Q15147 1175 aa9.97□□□□□ -0.81
SNRPA1-206ENST00000558059 ANKRD1Q15327 319 aa9.97□□□□□ -0.81
SNRPA1-206ENST00000558059 ME3Q16798 604 aa9.97□□□□□ -0.81
SNRPA1-206ENST00000558059 PRR16Q569H4 304 aa9.97□□□□□ -0.81
SNRPA1-206ENST00000558059 PLEKHG4Q58EX7 1191 aa9.97□□□□□ -0.81
SNRPA1-206ENST00000558059 BLIDQ8IZY5 108 aa9.97□□□□□ -0.81
SNRPA1-206ENST00000558059 DAGLBQ8NCG7 672 aa9.97□□□□□ -0.81
SNRPA1-206ENST00000558059 SLC17A8Q8NDX2 589 aa9.97□□□□□ -0.81
SNRPA1-206ENST00000558059 DBF4BQ8NFT6 615 aa9.97□□□□□ -0.81
SNRPA1-206ENST00000558059 ZBTB10Q96DT7 871 aa9.97□□□□□ -0.81
SNRPA1-206ENST00000558059 ZNF577Q9BSK1 485 aa9.97□□□□□ -0.81
SNRPA1-206ENST00000558059 PRDM12Q9H4Q4 367 aa9.97□□□□□ -0.81
SNRPA1-206ENST00000558059 AZI2Q9H6S1 392 aa9.97□□□□□ -0.81
SNRPA1-206ENST00000558059 SLC28A3Q9HAS3 691 aa9.97□□□□□ -0.81
SNRPA1-206ENST00000558059 TUBE1Q9UJT0 475 aa9.97□□□□□ -0.81
SNRPA1-206ENST00000558059 TTC3P53804 2025 aa9.96□□□□□ -0.81
SNRPA1-206ENST00000558059 RRN3P2A6NIE6 340 aa9.96□□□□□ -0.82
SNRPA1-206ENST00000558059 MSH4O15457 936 aa9.96□□□□□ -0.82
SNRPA1-206ENST00000558059 EFCAB14O75071 495 aa9.96□□□□□ -0.82
SNRPA1-206ENST00000558059 CDKL5O76039 1030 aa9.96□□□□□ -0.82
SNRPA1-206ENST00000558059 ARHGEF15O94989 841 aa9.96□□□□□ -0.82
SNRPA1-206ENST00000558059 LARGE1O95461 756 aa9.96□□□□□ -0.82
SNRPA1-206ENST00000558059 CHRNA1P02708 482 aa9.96□□□□□ -0.82
SNRPA1-206ENST00000558059 ATP4AP20648 1035 aa9.96□□□□□ -0.82
SNRPA1-206ENST00000558059 KCNJ6P48051 423 aa9.96□□□□□ -0.82
SNRPA1-206ENST00000558059 NEK4P51957 841 aa9.96□□□□□ -0.82
SNRPA1-206ENST00000558059 IGBP1P78318 339 aa9.96□□□□□ -0.82
SNRPA1-206ENST00000558059 MGAT3Q09327 533 aa9.96□□□□□ -0.82
SNRPA1-206ENST00000558059 IKBKEQ14164 716 aa9.96□□□□□ -0.82
SNRPA1-206ENST00000558059 ADGRE1Q14246 886 aa9.96□□□□□ -0.82
SNRPA1-206ENST00000558059 GALNT17Q6IS24 598 aa9.96□□□□□ -0.82
SNRPA1-206ENST00000558059 ZNF746Q6NUN9 644 aaPredicted RBP9.96□□□□□ -0.82
SNRPA1-206ENST00000558059 TAF2Q6P1X5 1199 aa9.96□□□□□ -0.82
SNRPA1-206ENST00000558059 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.96□□□□□ -0.82
SNRPA1-206ENST00000558059 TMCO2Q7Z6W1 182 aaPredicted RBP9.96□□□□□ -0.82
SNRPA1-206ENST00000558059 IFNLR1Q8IU57 520 aaPredicted RBP9.96□□□□□ -0.82
SNRPA1-206ENST00000558059 CCDC60Q8IWA6 550 aaPredicted RBP9.96□□□□□ -0.82
SNRPA1-206ENST00000558059 NECAB1Q8N987 351 aa9.96□□□□□ -0.82
SNRPA1-206ENST00000558059 TBCKQ8TEA7 893 aa9.96□□□□□ -0.82
SNRPA1-206ENST00000558059 TRAPPC12Q8WVT3 735 aa9.96□□□□□ -0.82
SNRPA1-206ENST00000558059 DNAJB3Q8WWF6 145 aa9.96□□□□□ -0.82
SNRPA1-206ENST00000558059 SPOCK2Q92563 424 aa9.96□□□□□ -0.82
SNRPA1-206ENST00000558059 PHF20Q9BVI0 1012 aa9.96□□□□□ -0.82
SNRPA1-206ENST00000558059 GJB4Q9NTQ9 266 aa9.96□□□□□ -0.82
SNRPA1-206ENST00000558059 TBC1D22BQ9NU19 505 aa9.96□□□□□ -0.82
SNRPA1-206ENST00000558059 KCNJ14Q9UNX9 436 aa9.96□□□□□ -0.82
SNRPA1-206ENST00000558059 STK36Q9NRP7 1315 aa9.96□□□□□ -0.82
SNRPA1-206ENST00000558059 SPTBN5Q9NRC6 3674 aaKnown RBP9.95□□□□□ -0.82
SNRPA1-206ENST00000558059 MYO7AQ13402 2215 aa9.95□□□□□ -0.82
SNRPA1-206ENST00000558059 BRWD1Q9NSI6 2320 aa9.95□□□□□ -0.82
SNRPA1-206ENST00000558059 CYP3A7-CYP3A51PA0A087WV96 503 aa9.95□□□□□ -0.82
SNRPA1-206ENST00000558059 KIF28PB7ZC32 967 aa9.95□□□□□ -0.82
SNRPA1-206ENST00000558059 BACH1O14867 736 aa9.95□□□□□ -0.82
SNRPA1-206ENST00000558059 GJB5O95377 273 aa9.95□□□□□ -0.82
SNRPA1-206ENST00000558059 CA3P07451 260 aa9.95□□□□□ -0.82
SNRPA1-206ENST00000558059 FDPSP14324 419 aaKnown RBP9.95□□□□□ -0.82
SNRPA1-206ENST00000558059 CYP3A7P24462 503 aa9.95□□□□□ -0.82
SNRPA1-206ENST00000558059 SLC26A2P50443 739 aa9.95□□□□□ -0.82
SNRPA1-206ENST00000558059 KRT76Q01546 638 aa9.95□□□□□ -0.82
SNRPA1-206ENST00000558059 TAP1Q03518 808 aa9.95□□□□□ -0.82
SNRPA1-206ENST00000558059 C8orf34Q49A92 452 aa9.95□□□□□ -0.82
SNRPA1-206ENST00000558059 Q4G0T1 1027 aa9.95□□□□□ -0.82
SNRPA1-206ENST00000558059 FAM160B1Q5W0V3 765 aa9.95□□□□□ -0.82
SNRPA1-206ENST00000558059 PPP2R2DQ66LE6 453 aa9.95□□□□□ -0.82
SNRPA1-206ENST00000558059 SWSAP1Q6NVH7 229 aa9.95□□□□□ -0.82
SNRPA1-206ENST00000558059 MIS18BP1Q6P0N0 1132 aa9.95□□□□□ -0.82
SNRPA1-206ENST00000558059 MAFAQ8NHW3 353 aaPredicted RBP9.95□□□□□ -0.82
SNRPA1-206ENST00000558059 ATP8B4Q8TF62 1192 aa9.95□□□□□ -0.82
SNRPA1-206ENST00000558059 SEPT8Q92599 483 aa9.95□□□□□ -0.82
SNRPA1-206ENST00000558059 SLC5A5Q92911 643 aa9.95□□□□□ -0.82
SNRPA1-206ENST00000558059 GTF3C6Q969F1 213 aa9.95□□□□□ -0.82
SNRPA1-206ENST00000558059 MBOAT7Q96N66 472 aa9.95□□□□□ -0.82
SNRPA1-206ENST00000558059 C22orf23Q9BZE7 217 aa9.95□□□□□ -0.82
SNRPA1-206ENST00000558059 ZNF302Q9NR11 478 aa9.95□□□□□ -0.82
SNRPA1-206ENST00000558059 ORC3Q9UBD5 711 aaPredicted RBP9.95□□□□□ -0.82
SNRPA1-206ENST00000558059 PCDHA2Q9Y5H9 948 aa9.95□□□□□ -0.82
SNRPA1-206ENST00000558059 NCOR1O75376 2440 aa9.95□□□□□ -0.82
SNRPA1-206ENST00000558059 TTC28Q96AY4 2481 aa9.94□□□□□ -0.82
SNRPA1-206ENST00000558059 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.94□□□□□ -0.82
SNRPA1-206ENST00000558059 LCHNA4D1U4 455 aa9.94□□□□□ -0.82
SNRPA1-206ENST00000558059 ZBTB42B2RXF5 422 aa9.94□□□□□ -0.82
SNRPA1-206ENST00000558059 TLL1O43897 1013 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms