RNA–Protein interactions for RNA: ENST00000558013.5

LDLR-207, Transcript of low density lipoprotein receptor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDLR, Length 3,144 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-207ENST00000558013 NDUFB10O96000 172 aa14.13□□□□□ -0.15
LDLR-207ENST00000558013 IVLP07476 585 aa14.13□□□□□ -0.15
LDLR-207ENST00000558013 EPHB4P54760 987 aa14.13□□□□□ -0.15
LDLR-207ENST00000558013 MSL1Q68DK7 614 aa14.13□□□□□ -0.15
LDLR-207ENST00000558013 SYN2Q92777 582 aaPredicted RBP14.13□□□□□ -0.15
LDLR-207ENST00000558013 PCDHGC5Q9Y5F6 944 aa14.13□□□□□ -0.15
LDLR-207ENST00000558013 CYP3A7-CYP3A51PA0A087WV96 503 aa14.13□□□□□ -0.15
LDLR-207ENST00000558013 GCNT3O95395 438 aa14.13□□□□□ -0.15
LDLR-207ENST00000558013 CYP3A7P24462 503 aa14.13□□□□□ -0.15
LDLR-207ENST00000558013 NMT1P30419 496 aaKnown RBP14.13□□□□□ -0.15
LDLR-207ENST00000558013 EXOC3L4Q17RC7 722 aa14.13□□□□□ -0.15
LDLR-207ENST00000558013 HHIPL2Q6UWX4 724 aa14.13□□□□□ -0.15
LDLR-207ENST00000558013 ASTN1O14525 1302 aa14.13□□□□□ -0.15
LDLR-207ENST00000558013 ZNF233A6NK53 670 aa14.13□□□□□ -0.15
LDLR-207ENST00000558013 CCT5P48643 541 aa14.13□□□□□ -0.15
LDLR-207ENST00000558013 SYT2Q8N9I0 419 aaPredicted RBP14.13□□□□□ -0.15
LDLR-207ENST00000558013 TDRD3Q9H7E2 651 aaKnown RBP14.13□□□□□ -0.15
LDLR-207ENST00000558013 FOCADQ5VW36 1801 aa14.12□□□□□ -0.15
LDLR-207ENST00000558013 TMCO5BA8MYB1 307 aa14.12□□□□□ -0.15
LDLR-207ENST00000558013 GNA14O95837 355 aa14.12□□□□□ -0.15
LDLR-207ENST00000558013 GH2P01242 217 aa14.12□□□□□ -0.15
LDLR-207ENST00000558013 RPA1P27694 616 aa14.12□□□□□ -0.15
LDLR-207ENST00000558013 ZNF622Q969S3 477 aaKnown RBP eCLIP14.12□□□□□ -0.153e-9■□□□□ 10.9
LDLR-207ENST00000558013 MBOAT7Q96N66 472 aa14.12□□□□□ -0.15
LDLR-207ENST00000558013 SH3GL2Q99962 352 aa14.12□□□□□ -0.15
LDLR-207ENST00000558013 NAGPAQ9UK23 515 aa14.12□□□□□ -0.15
LDLR-207ENST00000558013 SPDYE3A6NKU9 549 aa14.12□□□□□ -0.15
LDLR-207ENST00000558013 AFPP02771 609 aaKnown RBP14.12□□□□□ -0.15
LDLR-207ENST00000558013 NR3C1P04150 777 aa14.12□□□□□ -0.15
LDLR-207ENST00000558013 XRCC5P13010 732 aaKnown RBP14.12□□□□□ -0.15
LDLR-207ENST00000558013 ECE1P42892 770 aa14.12□□□□□ -0.15
LDLR-207ENST00000558013 GNGT1P63211 74 aa14.12□□□□□ -0.15
LDLR-207ENST00000558013 PDCLQ13371 301 aa14.12□□□□□ -0.15
LDLR-207ENST00000558013 EDRF1Q3B7T1 1238 aa14.12□□□□□ -0.15
LDLR-207ENST00000558013 KIAA1755Q5JYT7 1200 aa14.12□□□□□ -0.15
LDLR-207ENST00000558013 MEX3CQ5U5Q3 659 aaKnown RBP14.12□□□□□ -0.15
LDLR-207ENST00000558013 ALKBH5Q6P6C2 394 aaKnown RBP14.12□□□□□ -0.15
LDLR-207ENST00000558013 EPM2AIP1Q7L775 607 aaPredicted RBP14.12□□□□□ -0.15
LDLR-207ENST00000558013 FBXO11Q86XK2 927 aa14.12□□□□□ -0.15
LDLR-207ENST00000558013 SLFN12Q8IYM2 578 aa14.12□□□□□ -0.15
LDLR-207ENST00000558013 PIK3R5Q8WYR1 880 aa14.12□□□□□ -0.15
LDLR-207ENST00000558013 AMNQ9BXJ7 453 aa14.12□□□□□ -0.15
LDLR-207ENST00000558013 SIX2Q9NPC8 291 aa14.12□□□□□ -0.15
LDLR-207ENST00000558013 PPFIA4O75335 1185 aa14.11□□□□□ -0.15
LDLR-207ENST00000558013 EMBQ6PCB8 327 aa14.11□□□□□ -0.15
LDLR-207ENST00000558013 ZC3H3Q8IXZ2 948 aaKnown RBP14.11□□□□□ -0.15
LDLR-207ENST00000558013 SLC35C1Q96A29 364 aa14.11□□□□□ -0.15
LDLR-207ENST00000558013 EIF2AK1Q9BQI3 630 aaKnown RBP14.11□□□□□ -0.15
LDLR-207ENST00000558013 GDF3Q9NR23 364 aa14.11□□□□□ -0.15
LDLR-207ENST00000558013 PI4KBQ9UBF8 816 aa14.11□□□□□ -0.15
LDLR-207ENST00000558013 VAV3Q9UKW4 847 aa14.11□□□□□ -0.15
LDLR-207ENST00000558013 TRAF3IP3Q9Y228 551 aa14.11□□□□□ -0.15
LDLR-207ENST00000558013 SAMM50Q9Y512 469 aa14.11□□□□□ -0.15
LDLR-207ENST00000558013 GRIN2DO15399 1336 aa14.11□□□□□ -0.15
LDLR-207ENST00000558013 TGFB1I1O43294 461 aa14.11□□□□□ -0.15
LDLR-207ENST00000558013 CEP104O60308 925 aa14.11□□□□□ -0.15
LDLR-207ENST00000558013 ITGA4P13612 1032 aa14.11□□□□□ -0.15
LDLR-207ENST00000558013 EPHA7Q15375 998 aa14.11□□□□□ -0.15
LDLR-207ENST00000558013 FOXR2Q6PJQ5 311 aa14.11□□□□□ -0.15
LDLR-207ENST00000558013 TPH2Q8IWU9 490 aa14.11□□□□□ -0.15
LDLR-207ENST00000558013 USP38Q8NB14 1042 aa14.11□□□□□ -0.15
LDLR-207ENST00000558013 MKL1Q969V6 931 aa14.11□□□□□ -0.15
LDLR-207ENST00000558013 CCDC17Q96LX7 622 aa14.11□□□□□ -0.15
LDLR-207ENST00000558013 CAPS2Q9BXY5 557 aa14.11□□□□□ -0.15
LDLR-207ENST00000558013 NUCKS1Q9H1E3 243 aaKnown RBP14.11□□□□□ -0.15
LDLR-207ENST00000558013 RASSF4Q9H2L5 321 aa14.11□□□□□ -0.15
LDLR-207ENST00000558013 GCNT4Q9P109 453 aa14.11□□□□□ -0.15
LDLR-207ENST00000558013 UBR3Q6ZT12 1888 aa14.11□□□□□ -0.15
LDLR-207ENST00000558013 TULP1O00294 542 aaPredicted RBP14.1□□□□□ -0.15
LDLR-207ENST00000558013 LRRN2O75325 713 aa14.1□□□□□ -0.15
LDLR-207ENST00000558013 GFPT2O94808 682 aa14.1□□□□□ -0.15
LDLR-207ENST00000558013 ZNF76P36508 570 aa14.1□□□□□ -0.15
LDLR-207ENST00000558013 IFT20Q8IY31 132 aa14.1□□□□□ -0.15
LDLR-207ENST00000558013 OR2W6PQ8NHA6 318 aa14.1□□□□□ -0.15
LDLR-207ENST00000558013 ZDHHC15Q96MV8 337 aa14.1□□□□□ -0.15
LDLR-207ENST00000558013 NYAP2Q9P242 653 aa14.1□□□□□ -0.15
LDLR-207ENST00000558013 SUGT1Q9Y2Z0 365 aa14.1□□□□□ -0.15
LDLR-207ENST00000558013 AFF2P51816 1311 aa14.1□□□□□ -0.15
LDLR-207ENST00000558013 PITPNM2Q9BZ72 1349 aa14.1□□□□□ -0.15
LDLR-207ENST00000558013 LTBP1Q14766 1721 aa14.1□□□□□ -0.15
LDLR-207ENST00000558013 SHOX2O60902 331 aaPredicted RBP14.1□□□□□ -0.15
LDLR-207ENST00000558013 HSF2BPO75031 334 aa14.1□□□□□ -0.15
LDLR-207ENST00000558013 NNTQ13423 1086 aa14.1□□□□□ -0.15
LDLR-207ENST00000558013 IQCKQ8N0W5 287 aa14.1□□□□□ -0.15
LDLR-207ENST00000558013 BCAS4Q8TDM0 211 aa14.1□□□□□ -0.15
LDLR-207ENST00000558013 WDR18Q9BV38 432 aa14.1□□□□□ -0.15
LDLR-207ENST00000558013 DDX47Q9H0S4 455 aaKnown RBP14.1□□□□□ -0.15
LDLR-207ENST00000558013 WRAP73Q9P2S5 460 aaPredicted RBP14.1□□□□□ -0.15
LDLR-207ENST00000558013 THSD7AQ9UPZ6 1657 aa14.1□□□□□ -0.15
LDLR-207ENST00000558013 CFBP00751 764 aa14.1□□□□□ -0.15
LDLR-207ENST00000558013 ERVK-9P63128 1117 aa14.1□□□□□ -0.15
LDLR-207ENST00000558013 PLS1Q14651 629 aa14.1□□□□□ -0.15
LDLR-207ENST00000558013 RPS6KA1Q15418 735 aa14.1□□□□□ -0.15
LDLR-207ENST00000558013 ABCB5Q2M3G0 1257 aa14.1□□□□□ -0.15
LDLR-207ENST00000558013 LRRC57Q8N9N7 239 aa14.1□□□□□ -0.15
LDLR-207ENST00000558013 RDH13Q8NBN7 331 aa14.1□□□□□ -0.15
LDLR-207ENST00000558013 DCAF4Q8WV16 495 aa14.1□□□□□ -0.15
LDLR-207ENST00000558013 CAVIN3Q969G5 261 aa14.1□□□□□ -0.15
LDLR-207ENST00000558013 RUFY1Q96T51 708 aa14.1□□□□□ -0.15
LDLR-207ENST00000558013 OSGEPQ9NPF4 335 aa14.1□□□□□ -0.15
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