RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 ZNF18P17022 549 aa8.26□□□□□ -1.09
SPG11-204ENST00000557866 GPC1P35052 558 aa8.26□□□□□ -1.09
SPG11-204ENST00000557866 MYL5Q02045 173 aa8.26□□□□□ -1.09
SPG11-204ENST00000557866 KCNB1Q14721 858 aa8.26□□□□□ -1.09
SPG11-204ENST00000557866 COG2Q14746 738 aa8.26□□□□□ -1.09
SPG11-204ENST00000557866 TMEM132BQ14DG7 1078 aa8.26□□□□□ -1.09
SPG11-204ENST00000557866 TREML2Q5T2D2 321 aa8.26□□□□□ -1.09
SPG11-204ENST00000557866 KRT79Q5XKE5 535 aa8.26□□□□□ -1.09
SPG11-204ENST00000557866 SLFN12Q8IYM2 578 aa8.26□□□□□ -1.09
SPG11-204ENST00000557866 RASSF8Q8NHQ8 419 aa8.26□□□□□ -1.09
SPG11-204ENST00000557866 SNX29Q8TEQ0 813 aa8.26□□□□□ -1.09
SPG11-204ENST00000557866 RAD54LQ92698 747 aa8.26□□□□□ -1.09
SPG11-204ENST00000557866 CALML4Q96GE6 196 aa8.26□□□□□ -1.09
SPG11-204ENST00000557866 FAM20AQ96MK3 541 aa8.26□□□□□ -1.09
SPG11-204ENST00000557866 TRERF1Q96PN7 1200 aa8.26□□□□□ -1.09
SPG11-204ENST00000557866 RAB34Q9BZG1 259 aa8.26□□□□□ -1.09
SPG11-204ENST00000557866 TRIM9Q9C026 710 aa8.26□□□□□ -1.09
SPG11-204ENST00000557866 TRIM5Q9C035 493 aa8.26□□□□□ -1.09
SPG11-204ENST00000557866 ELP3Q9H9T3 547 aa8.26□□□□□ -1.09
SPG11-204ENST00000557866 MAGEF1Q9HAY2 307 aa8.26□□□□□ -1.09
SPG11-204ENST00000557866 RRAGDQ9NQL2 400 aaPredicted RBP8.26□□□□□ -1.09
SPG11-204ENST00000557866 HOMER2Q9NSB8 354 aa8.26□□□□□ -1.09
SPG11-204ENST00000557866 FANCLQ9NW38 375 aa8.26□□□□□ -1.09
SPG11-204ENST00000557866 TMOD4Q9NZQ9 345 aa8.26□□□□□ -1.09
SPG11-204ENST00000557866 ZNF214Q9UL59 606 aaPredicted RBP8.26□□□□□ -1.09
SPG11-204ENST00000557866 GDAQ9Y2T3 454 aa8.26□□□□□ -1.09
SPG11-204ENST00000557866 FRMPD4Q14CM0 1322 aa8.26□□□□□ -1.09
SPG11-204ENST00000557866 MEIS1O00470 390 aa8.25□□□□□ -1.09
SPG11-204ENST00000557866 ATP2A1O14983 1001 aa8.25□□□□□ -1.09
SPG11-204ENST00000557866 SLC26A4O43511 780 aa8.25□□□□□ -1.09
SPG11-204ENST00000557866 COBLO75128 1261 aa8.25□□□□□ -1.09
SPG11-204ENST00000557866 PSMD10O75832 226 aa8.25□□□□□ -1.09
SPG11-204ENST00000557866 RHOBTB3O94955 611 aa8.25□□□□□ -1.09
SPG11-204ENST00000557866 MYL1P05976 194 aa8.25□□□□□ -1.09
SPG11-204ENST00000557866 SPATA31C1P0DKV0 1188 aa8.25□□□□□ -1.09
SPG11-204ENST00000557866 ITGB5P18084 799 aa8.25□□□□□ -1.09
SPG11-204ENST00000557866 ERCC5P28715 1186 aaPredicted RBP8.25□□□□□ -1.09
SPG11-204ENST00000557866 ZNF76P36508 570 aa8.25□□□□□ -1.09
SPG11-204ENST00000557866 CCT6AP40227 531 aaKnown RBP8.25□□□□□ -1.09
SPG11-204ENST00000557866 IREB2P48200 963 aaKnown RBP8.25□□□□□ -1.09
SPG11-204ENST00000557866 OAZ1P54368 228 aa8.25□□□□□ -1.09
SPG11-204ENST00000557866 STX17P56962 302 aa8.25□□□□□ -1.09
SPG11-204ENST00000557866 RPS6P62753 249 aaKnown RBP8.25□□□□□ -1.09
SPG11-204ENST00000557866 FANCCQ00597 558 aa8.25□□□□□ -1.09
SPG11-204ENST00000557866 MOGSQ13724 837 aa8.25□□□□□ -1.09
SPG11-204ENST00000557866 CEP55Q53EZ4 464 aa8.25□□□□□ -1.09
SPG11-204ENST00000557866 EAPPQ56P03 285 aaPredicted RBP8.25□□□□□ -1.09
SPG11-204ENST00000557866 CT47A1Q5JQC4 288 aaPredicted RBP8.25□□□□□ -1.09
SPG11-204ENST00000557866 ZNF658Q5TYW1 1059 aaPredicted RBP8.25□□□□□ -1.09
SPG11-204ENST00000557866 B3GNT9Q6UX72 402 aa8.25□□□□□ -1.09
SPG11-204ENST00000557866 SV2AQ7L0J3 742 aa8.25□□□□□ -1.09
SPG11-204ENST00000557866 CYP2U1Q7Z449 544 aa8.25□□□□□ -1.09
SPG11-204ENST00000557866 MCF2L2Q86YR7 1114 aa8.25□□□□□ -1.09
SPG11-204ENST00000557866 GPR161Q8N6U8 529 aaKnown RBP8.25□□□□□ -1.09
SPG11-204ENST00000557866 SPC24Q8NBT2 197 aa8.25□□□□□ -1.09
SPG11-204ENST00000557866 SLC5A5Q92911 643 aa8.25□□□□□ -1.09
SPG11-204ENST00000557866 TRIM44Q96DX7 344 aaPredicted RBP8.25□□□□□ -1.09
SPG11-204ENST00000557866 MRFAP1L1Q96HT8 127 aa8.25□□□□□ -1.09
SPG11-204ENST00000557866 TAAR1Q96RJ0 339 aa8.25□□□□□ -1.09
SPG11-204ENST00000557866 RNF146Q9NTX7 359 aa8.25□□□□□ -1.09
SPG11-204ENST00000557866 IFNKQ9P0W0 207 aa8.25□□□□□ -1.09
SPG11-204ENST00000557866 NRBP1Q9UHY1 535 aa8.25□□□□□ -1.09
SPG11-204ENST00000557866 PCDHB11Q9Y5F2 797 aa8.25□□□□□ -1.09
SPG11-204ENST00000557866 CSADQ9Y600 493 aa8.25□□□□□ -1.09
SPG11-204ENST00000557866 SMCHD1A6NHR9 2005 aa8.24□□□□□ -1.09
SPG11-204ENST00000557866 DOCK1Q14185 1865 aa8.24□□□□□ -1.09
SPG11-204ENST00000557866 A0A0G2JLL6 359 aaPredicted RBP8.24□□□□□ -1.09
SPG11-204ENST00000557866 LOC100996750A0A140TA64 210 aa8.24□□□□□ -1.09
SPG11-204ENST00000557866 A0A1W2PRU2 124 aa8.24□□□□□ -1.09
SPG11-204ENST00000557866 IQCA1LA6NCM1 817 aa8.24□□□□□ -1.09
SPG11-204ENST00000557866 TRAF5O00463 557 aa8.24□□□□□ -1.09
SPG11-204ENST00000557866 CXCL11O14625 94 aa8.24□□□□□ -1.09
SPG11-204ENST00000557866 PEX10O60683 326 aa8.24□□□□□ -1.09
SPG11-204ENST00000557866 CDC25BP30305 580 aa8.24□□□□□ -1.09
SPG11-204ENST00000557866 PRCPP42785 496 aa8.24□□□□□ -1.09
SPG11-204ENST00000557866 MRPS9P82933 396 aaKnown RBP8.24□□□□□ -1.09
SPG11-204ENST00000557866 PPATQ06203 517 aa8.24□□□□□ -1.09
SPG11-204ENST00000557866 BAATQ14032 418 aaPredicted RBP8.24□□□□□ -1.09
SPG11-204ENST00000557866 DHX8Q14562 1220 aaKnown RBP8.24□□□□□ -1.09
SPG11-204ENST00000557866 LDLRAD1Q5T700 205 aa8.24□□□□□ -1.09
SPG11-204ENST00000557866 SPATA1Q5VX52 437 aa8.24□□□□□ -1.09
SPG11-204ENST00000557866 NCAPH2Q6IBW4 605 aa8.24□□□□□ -1.09
SPG11-204ENST00000557866 SNRNP48Q6IEG0 339 aaKnown RBP8.24□□□□□ -1.09
SPG11-204ENST00000557866 KLHL10Q6JEL2 608 aa8.24□□□□□ -1.09
SPG11-204ENST00000557866 CNNM4Q6P4Q7 775 aa8.24□□□□□ -1.09
SPG11-204ENST00000557866 SV2BQ7L1I2 683 aa8.24□□□□□ -1.09
SPG11-204ENST00000557866 OTOP1Q7RTM1 612 aa8.24□□□□□ -1.09
SPG11-204ENST00000557866 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.24□□□□□ -1.09
SPG11-204ENST00000557866 PRRT2Q7Z6L0 340 aaPredicted RBP8.24□□□□□ -1.09
SPG11-204ENST00000557866 CATSPER3Q86XQ3 398 aa8.24□□□□□ -1.09
SPG11-204ENST00000557866 ERO1BQ86YB8 467 aa8.24□□□□□ -1.09
SPG11-204ENST00000557866 ANKRD13AQ8IZ07 590 aa8.24□□□□□ -1.09
SPG11-204ENST00000557866 ADSSL1Q8N142 457 aa8.24□□□□□ -1.09
SPG11-204ENST00000557866 SAMD3Q8N6K7 520 aa8.24□□□□□ -1.09
SPG11-204ENST00000557866 GIMAP8Q8ND71 665 aaPredicted RBP8.24□□□□□ -1.09
SPG11-204ENST00000557866 LARP4BQ92615 738 aaKnown RBP8.24□□□□□ -1.09
SPG11-204ENST00000557866 DNAJC19Q96DA6 116 aa8.24□□□□□ -1.09
SPG11-204ENST00000557866 ZNF830Q96NB3 372 aaPredicted RBP8.24□□□□□ -1.09
SPG11-204ENST00000557866 MXRA8Q9BRK3 442 aa8.24□□□□□ -1.09
SPG11-204ENST00000557866 KRTAP4-6Q9BYQ5 205 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms